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The map label for this gene is recO [H]

Identifier: 167039987

GI number: 167039987

Start: 1382299

End: 1383045

Strand: Direct

Name: recO [H]

Synonym: Teth514_1346

Alternate gene names: 167039987

Gene position: 1382299-1383045 (Clockwise)

Preceding gene: 167039986

Following gene: 167039988

Centisome position: 56.25

GC content: 30.25

Gene sequence:

>747_bases
ATGCGCTTGTTAAAAACAGAAGCAATAGTATTAAAAAACAATTTAATAGGTGAAACAGACAAAATAGCCACCCTTTTTAC
TAAAAGCTATGGTAAACTTCAGGCAGTGGCAAAAGGGGCAAGGCGCTCAAAGAGCCGATTTGTGAATGCAATAAGGCCTT
TTGTTGTTGCCAATTATGTTATTTTTGAGGGGCAAAATTATTACTATATTGACCAATGGGAGTTAATCGAAGCTCATAAA
AATATAGAAAAAGACTTAGCTAAATTTTCTGTAGCTTCGTATATTGCCGAAACTATAAACAAAATTTTAGAGGAAAATCA
AAAAAGCGAGAGGCTGTATCTGTTTTTAAAACATTCTTTAAAAGCAGTTGACGAGCTACAAATAGACCCTTTAATTTTTA
TTTCTTCTTATAACTTAAAATTAGTTTCTTTATTGGGATATATGCCTCAACTTGATAATTGTGTTGTCTGTGGAAAAAGA
GAGAATTTAAAATATTTTTCTAATTCCTGCGGGGGTGCAGTGTGTATAAACTGCAAAAATAAATGTTTTGACGCCAAGCC
ATTACATGAAGTAACATTAAAAGCTATAAAGTATTTTCTTAAAGGAGATTATGACAAGCTTCAAAATATTAAAGTTTCAG
GAGTTATAAAAGAAGAAGTGGATAAAATAATAACAGCCTATATGAAAGAACATCTTGAAATAGAGTTTAAATCAAAAGAT
TTTATTAACAATTTACAAAATATGTGA

Upstream 100 bases:

>100_bases
ATGCTAAGGCGATGATTGAAGCAGGAGCCAATCGGATTGGGGCAAGTGCAGGCGTTAAGATTGTGGAGGAATGGAATAAA
CTAAAAATGAGTTGATAAAA

Downstream 100 bases:

>100_bases
AAGGAGGGTTTAACGTGTTAGATGAAGAATTAGAAAAAATAGATATGATAGTAGAGAGAATGGGAGTAAGTTATAAAGAA
GCAAAAGAAGCATTAGAGAA

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O [H]

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MRLLKTEAIVLKNNLIGETDKIATLFTKSYGKLQAVAKGARRSKSRFVNAIRPFVVANYVIFEGQNYYYIDQWELIEAHK
NIEKDLAKFSVASYIAETINKILEENQKSERLYLFLKHSLKAVDELQIDPLIFISSYNLKLVSLLGYMPQLDNCVVCGKR
ENLKYFSNSCGGAVCINCKNKCFDAKPLHEVTLKAIKYFLKGDYDKLQNIKVSGVIKEEVDKIITAYMKEHLEIEFKSKD
FINNLQNM

Sequences:

>Translated_248_residues
MRLLKTEAIVLKNNLIGETDKIATLFTKSYGKLQAVAKGARRSKSRFVNAIRPFVVANYVIFEGQNYYYIDQWELIEAHK
NIEKDLAKFSVASYIAETINKILEENQKSERLYLFLKHSLKAVDELQIDPLIFISSYNLKLVSLLGYMPQLDNCVVCGKR
ENLKYFSNSCGGAVCINCKNKCFDAKPLHEVTLKAIKYFLKGDYDKLQNIKVSGVIKEEVDKIITAYMKEHLEIEFKSKD
FINNLQNM
>Mature_248_residues
MRLLKTEAIVLKNNLIGETDKIATLFTKSYGKLQAVAKGARRSKSRFVNAIRPFVVANYVIFEGQNYYYIDQWELIEAHK
NIEKDLAKFSVASYIAETINKILEENQKSERLYLFLKHSLKAVDELQIDPLIFISSYNLKLVSLLGYMPQLDNCVVCGKR
ENLKYFSNSCGGAVCINCKNKCFDAKPLHEVTLKAIKYFLKGDYDKLQNIKVSGVIKEEVDKIITAYMKEHLEIEFKSKD
FINNLQNM

Specific function: Involved in DNA repair and recF pathway recombination [H]

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717 [H]

Pfam domain/function: PF02565 RecO; PF11967 RecO_N [H]

EC number: NA

Molecular weight: Translated: 28546; Mature: 28546

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLKTEAIVLKNNLIGETDKIATLFTKSYGKLQAVAKGARRSKSRFVNAIRPFVVANYV
CCCCHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
IFEGQNYYYIDQWELIEAHKNIEKDLAKFSVASYIAETINKILEENQKSERLYLFLKHSL
EEECCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHH
KAVDELQIDPLIFISSYNLKLVSLLGYMPQLDNCVVCGKRENLKYFSNSCGGAVCINCKN
HHHHHCCCCCEEEEECCCHHHHHHHHCCCCCCCEEEECCCCCCHHHHCCCCCEEEECCCC
KCFDAKPLHEVTLKAIKYFLKGDYDKLQNIKVSGVIKEEVDKIITAYMKEHLEIEFKSKD
CCCCCCCHHHHHHHHHHHHHCCCHHHHHCCEEEHHHHHHHHHHHHHHHHHHHEEEECCHH
FINNLQNM
HHHHHHCC
>Mature Secondary Structure
MRLLKTEAIVLKNNLIGETDKIATLFTKSYGKLQAVAKGARRSKSRFVNAIRPFVVANYV
CCCCHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
IFEGQNYYYIDQWELIEAHKNIEKDLAKFSVASYIAETINKILEENQKSERLYLFLKHSL
EEECCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHH
KAVDELQIDPLIFISSYNLKLVSLLGYMPQLDNCVVCGKRENLKYFSNSCGGAVCINCKN
HHHHHCCCCCEEEEECCCHHHHHHHHCCCCCCCEEEECCCCCCHHHHCCCCCEEEECCCC
KCFDAKPLHEVTLKAIKYFLKGDYDKLQNIKVSGVIKEEVDKIITAYMKEHLEIEFKSKD
CCCCCCCHHHHHHHHHHHHHCCCHHHHHCCEEEHHHHHHHHHHHHHHHHHHHEEEECCHH
FINNLQNM
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA