| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is mcrA [C]
Identifier: 167039886
GI number: 167039886
Start: 1283102
End: 1283461
Strand: Direct
Name: mcrA [C]
Synonym: Teth514_1241
Alternate gene names: 167039886
Gene position: 1283102-1283461 (Clockwise)
Preceding gene: 167039885
Following gene: 167039887
Centisome position: 52.22
GC content: 47.5
Gene sequence:
>360_bases ATGCCAAAGAAACCAAAACGACCATGTTCTTCTCCTGGTTGTCCGGAACTGACAGATGGACGTTTTTGTCCGGAGCATGC CAAAAAGGAAGCTTCTCGTTATGAAAAATATCAGAGAGATCCTGAAACGAGGAAGCGTTACGGTCGTGCATGGAAAAGAA TACGTGACCGTTACATTACAGCCCATCCACTATGTGAAGAGTGTAAAAGACAAGGAAAGCTGACACCAGCAACTGAAGTG CACCATATCCTTCCCTTGGCACGAGGTGGGACACACGATGAAAGCAACCTAATGGCTCTTTGTACTCCTTGTCACTCAGC TATCACAGCAAGAGATGGAGACCGTTGGGGAACCCGGTAG
Upstream 100 bases:
>100_bases TTTTATTAGAAATCCATAATACAATGGTATTGTGAAAAATTGTAGAGAGCCTTCGTGGAAATACCGCGGGGGCTTTTTGC ATGTCCAAAGGAGGTACGAA
Downstream 100 bases:
>100_bases GGGGAGTCATATCTCCACAGCTATTTAAATGTGCAACGGGCGTGGGGCTTCGTGCAAAAAGTCGCAGTTTCAAACGGGGT AATACCCCCTAATAAGAAAT
Product: HNH endonuclease
Products: NA
Alternate protein names: HNH Endonuclease Domain-Containing Protein; HNH Endonuclease Domain Protein; Phage Associated Protein; Phage Endonuclease; HNH Endonuclease Family Protein; Restriction Endonuclease; Bacteriophage Holin Protein; Gp82 Phage Protein; Phage HNH Endonuclease; Electron Transporter; Holin Protein; Phage-Like Protein; Phage Holin
Number of amino acids: Translated: 119; Mature: 118
Protein sequence:
>119_residues MPKKPKRPCSSPGCPELTDGRFCPEHAKKEASRYEKYQRDPETRKRYGRAWKRIRDRYITAHPLCEECKRQGKLTPATEV HHILPLARGGTHDESNLMALCTPCHSAITARDGDRWGTR
Sequences:
>Translated_119_residues MPKKPKRPCSSPGCPELTDGRFCPEHAKKEASRYEKYQRDPETRKRYGRAWKRIRDRYITAHPLCEECKRQGKLTPATEV HHILPLARGGTHDESNLMALCTPCHSAITARDGDRWGTR >Mature_118_residues PKKPKRPCSSPGCPELTDGRFCPEHAKKEASRYEKYQRDPETRKRYGRAWKRIRDRYITAHPLCEECKRQGKLTPATEVH HILPLARGGTHDESNLMALCTPCHSAITARDGDRWGTR
Specific function: Restriction Of 5-Methyl And 5-Hydroxymethylcytosines At The Specific DNA Sequence C(Me)Cgg. [C]
COG id: COG1403
COG function: function code V; Restriction endonuclease
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.1.21.- [C]
Molecular weight: Translated: 13699; Mature: 13568
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 5.9 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKKPKRPCSSPGCPELTDGRFCPEHAKKEASRYEKYQRDPETRKRYGRAWKRIRDRYIT CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC AHPLCEECKRQGKLTPATEVHHILPLARGGTHDESNLMALCTPCHSAITARDGDRWGTR CCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure PKKPKRPCSSPGCPELTDGRFCPEHAKKEASRYEKYQRDPETRKRYGRAWKRIRDRYIT CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC AHPLCEECKRQGKLTPATEVHHILPLARGGTHDESNLMALCTPCHSAITARDGDRWGTR CCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on ester bonds [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA