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The map label for this gene is 167039884

Identifier: 167039884

GI number: 167039884

Start: 1281170

End: 1282519

Strand: Direct

Name: 167039884

Synonym: Teth514_1239

Alternate gene names: NA

Gene position: 1281170-1282519 (Clockwise)

Preceding gene: 167039883

Following gene: 167039885

Centisome position: 52.14

GC content: 39.93

Gene sequence:

>1350_bases
ATGAAATACAAGCCTCATGAGTATCAGGTTTATGCCACTGAGTATATCCTCAATCATCCTATAGCAGCAGTGCTCTTAGA
TATGGGTTTAGGTAAAAGTGTCATAACTTTAACTGCCATCTTTGATTTAACACTGGACAGTTTTCTTGTTCGTAAGGTTC
TGGTTATTGCACCGCTAAGAGTTGCCAGAGATACATGGCCTGCAGAGATTGAAAAGTGGGATCACTTAAAGGGTCTTAAA
TATACTTTAGCAGTTGGCTCTGAAGTAAAGAGAAAAACTGCCTTTATGGAAAGAGCACAAGTTTACATTATCAATCGAGA
AAATGTAGAATGGCTCATTACAAGAAGTGGAATTCCTTTTGACTTTGATATGGTGGTAATTGATGAGTTGTCTTCTTTTA
AATCTCATCAAGCTAAGAGATTTAAAAGCTTAATGAGAGTTAGACCCAAGGTAAAAAGGATAGTAGGACTTACTGGAACC
CCATCCTCCAACGGATTAATGGATTTGTGGGCACAGTATCGCTTATTAGATATGGGACAACGATTAGGTAGGTTTATTGG
TAGGTATCGGGAGGATTACTTTGTACCAGATAAGCGTAATCAGCAAGTGATCTTCTCCTACAAACCAAAACCAGGAGCAG
AAGAAGAAATTTATAAGCTTATATCTGATATAACTATTAGCATGAAAGGGACAGATTACCTGAAGTTGCCGGACTTAGTT
ATAAACGAAGTGCCTGTAAAGCTTTCTGAAAAAGAAATGAAAACCCTCGATACGATGAAGCGGGATTTAATTACAAATGT
TAAAGGTGAAGAAGTAACTGCAGCAAATGCAGCAGCTCTTTCAGGAAAGCTCCTGCAGATGGCAAATGGAGCAGTTTATG
ATGATCATGGCACAGTCCTTTATATACATGACCGTAAGCTGGATGCACTGGAAGACTTAATCGAAGCTGCTAATGGCAAG
CCAGTTCTAATTGCTTATTGGTTTAAGCATGATTTGTCACGAATACAAAAGCGTTTTGAGGTTGAGGTGTTATCCACTAG
CGATTCTATTAAGAGGTGGAATGATGGAGAAATCCCCATTGCAGTCATCCATCCAGCATCAGCAGGACATGGACTGAACT
TGCAAGCTGGAGGTTCAACTCTTGTATGGTTTGGTCTAACTTGGAGCCTAGAGCTTTATCAGCAAACCAACGCCCGTCTT
TGGCGGCAAGGACAAAAAGAAACGGTAGTGATTCATCACTTGATTTCCAAAGGCACCATTGATGAACGTGTAATGAAAGC
CCTAAATGATAAAAACAATACTCAATCCGCACTGATAGATGCGGTTAAAGCCACACTAAAGGAGGTCTGA

Upstream 100 bases:

>100_bases
ACCTTAAGACCCCTACAAGAAAAGCGAAAAAGACAGTTAGAGGCACTTGGTTTTTTGGTATTCTGCCTGGACCATATAGA
TCAGATTGGAGGGATACTTC

Downstream 100 bases:

>100_bases
TAAAATGAACATTGTCTGGCAATATTTAGATAAAAGAGCAGCGGCAATTAACGCCCTAAAAGATTACAGCAGTATGAAGT
ACATCATAGAACATACCGAT

Product: SNF2-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 449; Mature: 449

Protein sequence:

>449_residues
MKYKPHEYQVYATEYILNHPIAAVLLDMGLGKSVITLTAIFDLTLDSFLVRKVLVIAPLRVARDTWPAEIEKWDHLKGLK
YTLAVGSEVKRKTAFMERAQVYIINRENVEWLITRSGIPFDFDMVVIDELSSFKSHQAKRFKSLMRVRPKVKRIVGLTGT
PSSNGLMDLWAQYRLLDMGQRLGRFIGRYREDYFVPDKRNQQVIFSYKPKPGAEEEIYKLISDITISMKGTDYLKLPDLV
INEVPVKLSEKEMKTLDTMKRDLITNVKGEEVTAANAAALSGKLLQMANGAVYDDHGTVLYIHDRKLDALEDLIEAANGK
PVLIAYWFKHDLSRIQKRFEVEVLSTSDSIKRWNDGEIPIAVIHPASAGHGLNLQAGGSTLVWFGLTWSLELYQQTNARL
WRQGQKETVVIHHLISKGTIDERVMKALNDKNNTQSALIDAVKATLKEV

Sequences:

>Translated_449_residues
MKYKPHEYQVYATEYILNHPIAAVLLDMGLGKSVITLTAIFDLTLDSFLVRKVLVIAPLRVARDTWPAEIEKWDHLKGLK
YTLAVGSEVKRKTAFMERAQVYIINRENVEWLITRSGIPFDFDMVVIDELSSFKSHQAKRFKSLMRVRPKVKRIVGLTGT
PSSNGLMDLWAQYRLLDMGQRLGRFIGRYREDYFVPDKRNQQVIFSYKPKPGAEEEIYKLISDITISMKGTDYLKLPDLV
INEVPVKLSEKEMKTLDTMKRDLITNVKGEEVTAANAAALSGKLLQMANGAVYDDHGTVLYIHDRKLDALEDLIEAANGK
PVLIAYWFKHDLSRIQKRFEVEVLSTSDSIKRWNDGEIPIAVIHPASAGHGLNLQAGGSTLVWFGLTWSLELYQQTNARL
WRQGQKETVVIHHLISKGTIDERVMKALNDKNNTQSALIDAVKATLKEV
>Mature_449_residues
MKYKPHEYQVYATEYILNHPIAAVLLDMGLGKSVITLTAIFDLTLDSFLVRKVLVIAPLRVARDTWPAEIEKWDHLKGLK
YTLAVGSEVKRKTAFMERAQVYIINRENVEWLITRSGIPFDFDMVVIDELSSFKSHQAKRFKSLMRVRPKVKRIVGLTGT
PSSNGLMDLWAQYRLLDMGQRLGRFIGRYREDYFVPDKRNQQVIFSYKPKPGAEEEIYKLISDITISMKGTDYLKLPDLV
INEVPVKLSEKEMKTLDTMKRDLITNVKGEEVTAANAAALSGKLLQMANGAVYDDHGTVLYIHDRKLDALEDLIEAANGK
PVLIAYWFKHDLSRIQKRFEVEVLSTSDSIKRWNDGEIPIAVIHPASAGHGLNLQAGGSTLVWFGLTWSLELYQQTNARL
WRQGQKETVVIHHLISKGTIDERVMKALNDKNNTQSALIDAVKATLKEV

Specific function: Unknown

COG id: COG0553

COG function: function code KL; Superfamily II DNA/RNA helicases, SNF2 family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SWIM-type zinc finger [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000330
- InterPro:   IPR007527 [H]

Pfam domain/function: PF00271 Helicase_C; PF00176 SNF2_N; PF04434 SWIM [H]

EC number: NA

Molecular weight: Translated: 51057; Mature: 51057

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYKPHEYQVYATEYILNHPIAAVLLDMGLGKSVITLTAIFDLTLDSFLVRKVLVIAPLR
CCCCCCEEEEEEEHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHH
VARDTWPAEIEKWDHLKGLKYTLAVGSEVKRKTAFMERAQVYIINRENVEWLITRSGIPF
HHCCCCCHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCEEEEEECCCEEEEEEECCCCC
DFDMVVIDELSSFKSHQAKRFKSLMRVRPKVKRIVGLTGTPSSNGLMDLWAQYRLLDMGQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHH
RLGRFIGRYREDYFVPDKRNQQVIFSYKPKPGAEEEIYKLISDITISMKGTDYLKLPDLV
HHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCEEEECCCCCEECCHHH
INEVPVKLSEKEMKTLDTMKRDLITNVKGEEVTAANAAALSGKLLQMANGAVYDDHGTVL
HCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHHHCCCEEECCCCEE
YIHDRKLDALEDLIEAANGKPVLIAYWFKHDLSRIQKRFEVEVLSTSDSIKRWNDGEIPI
EEECCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHEEEEEECCCHHCCCCCCCCCE
AVIHPASAGHGLNLQAGGSTLVWFGLTWSLELYQQTNARLWRQGQKETVVIHHLISKGTI
EEEECCCCCCCCEEECCCCEEEEEEEEEEEEEHHHHHHHHHHCCCCCEEEEEHHHHCCCH
DERVMKALNDKNNTQSALIDAVKATLKEV
HHHHHHHHCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKYKPHEYQVYATEYILNHPIAAVLLDMGLGKSVITLTAIFDLTLDSFLVRKVLVIAPLR
CCCCCCEEEEEEEHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHH
VARDTWPAEIEKWDHLKGLKYTLAVGSEVKRKTAFMERAQVYIINRENVEWLITRSGIPF
HHCCCCCHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCEEEEEECCCEEEEEEECCCCC
DFDMVVIDELSSFKSHQAKRFKSLMRVRPKVKRIVGLTGTPSSNGLMDLWAQYRLLDMGQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHH
RLGRFIGRYREDYFVPDKRNQQVIFSYKPKPGAEEEIYKLISDITISMKGTDYLKLPDLV
HHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCEEEECCCCCEECCHHH
INEVPVKLSEKEMKTLDTMKRDLITNVKGEEVTAANAAALSGKLLQMANGAVYDDHGTVL
HCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHHHCCCEEECCCCEE
YIHDRKLDALEDLIEAANGKPVLIAYWFKHDLSRIQKRFEVEVLSTSDSIKRWNDGEIPI
EEECCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHEEEEEECCCHHCCCCCCCCCE
AVIHPASAGHGLNLQAGGSTLVWFGLTWSLELYQQTNARLWRQGQKETVVIHHLISKGTI
EEEECCCCCCCCEEECCCCEEEEEEEEEEEEEHHHHHHHHHHCCCCCEEEEEHHHHCCCH
DERVMKALNDKNNTQSALIDAVKATLKEV
HHHHHHHHCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7569993; 8253680 [H]