| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is 167039882
Identifier: 167039882
GI number: 167039882
Start: 1278305
End: 1280650
Strand: Direct
Name: 167039882
Synonym: Teth514_1237
Alternate gene names: NA
Gene position: 1278305-1280650 (Clockwise)
Preceding gene: 167039881
Following gene: 167039883
Centisome position: 52.02
GC content: 41.3
Gene sequence:
>2346_bases ATGAAGATAGCGGTTGGTAACAGCCGAATGGATAAAAAGTGGAAGAACAATGATATCACATGGGAGGACTTTATCTCACG AGTTAAATCTACCATACGAACAACAGAAACGGTATCTGAATTTCGGAAAATGAGTCGCGCTCAACAGGACTCAATAAAAG ATGTAGGAGGATTTGTGGGAGGAGCCCTTCGTGAAGGAAAACGCAGAAATGGTTATGTCCTCTCCCGTTCCCTTCTGACT TTAGATATGGATTATGCCAAACCAGAGGTTTGGGAGCAAATTGAAGCGTTACATGATTTCAAATGCTGCATCTATTCTAC CCATAAACATACACCAGATGCACCAAGATTAAGACTTATTATTCCACTTAAAAGAGAAGTAACAGAGGATGAATACCCAG CCCTTGGTCGGATGGTTGCAAAGGAGATTGGGATTGATTTATTCGATGACACCACTTATGAACCTTCAAGACTAATGTAT TGGCCTTCTACACCGTCAGATGGAGAGTTTGTATTTAAAGAGAAAGACGGTGAACTATTGGACCCAGATATCTATCTATC AAAATATGTAGACTGGCGGGACACTTCAATGTGGCCAGTCTCAAGTCGACAATCTGAGGTTGTACAAAGGAAAATAACTA AACAAGCAGATCCATTAATTAAAGAAGGGGTTATAGGAGCATTTTGCAGAGCCTATAACATTGAAGAAGCCATCGAAGAA TTTCTACCTGATGTATATGAACCTAGTACCATGAATGGACGATTTGATTATATTCCAGCAGATTCTTCAGCAGGCTTGGT AATCTATGATGGTAAATTTGCTTATAGCCATCATGCTACCGATCCAGCATGTGGAATGTTGCTAAACGCATTTGATTTGG TCCGAGTGCATAAGTTTCGGGAACTAGATGAAAAGGTGACAGAAAATACACCGCCAAGTAAACTACCTTCATTTAGAGCC ATGACAGATTTGGCATTAGAGGATGAACGGGTAAAAGAGCAGTTTGCTGAAGAACGAAAGGCTCAGGTTGAAAAAGAGTT TATTGATGAAGATTGGGAAAAGCAGCTGGAGATTGATAAGACAGGAACGGTTAAAAATACTCTTAGAAATTTGATTTTGA TACTTGAAAATGATCCCAACCTAAAAAGCATAGTGTTTAATCAGCTATCTGATAGTCTCGAAATTAAAGGTGATGTTCCT TGGCCGCATCCATCGAAGTTCTGGAGAGATGCAGATGATGCACAGCTAATCAGCTACATTGACACCCACTACGGAACCTT TTCTGCAAGAAACTATGATGTAGCGGTAGCGAAGGTCGCTGACGATAGATCTTATCATCCGATTCGGGAATTTATTGAGG CTCTTCCTGAGTGGGATAAGGTAGCTAGAGTAGATACCTTGCTAATCGATTATCTAGGTGCATCAGATAATCCATATGTT CGAGCTGTGACAAGAAAAACTTTATGTGCAGCGATTTCTCGTGTACTGACTCCAGGCATCAAGTTTGATTCCATGTTGGT TTTAAATGGCCCGCAGGGAGTTGGAAAAAGTACTCTTATAGCCAAGTTAGGTGGAGACTGGTTTTCTGATAGTTTGAGCT TGTCAGATACCAAGGATAAGACCGCCGCAGAAAAGTTACAAGGTTACTGGATTTTAGAAATTGGAGAGCTGGCTGGACTA AAAAAAGCAGAAGTAGAAACACTTAGAAGCTTCTTATCTCGCCAGAATGATATTTATCGAGCTAGCTTTGGCAAGAGAGC TACTCCTCACTTAAGACAATGTGTCTTTTTTGGCACCACTAATGCTGAAAAAGGCTATTTACGGGATACCACAGGAAACC GTCGTTTTTGGCCGGTAAAGACCCCGGGAAATGGCACAAAAAAATCTTGGCAGCTAAAGCAGGATGAAATTCTGCAGATA TGGGCCGAGGCTCTTACCTATGTAAAGGCTGGAGAGAAATTGTACCTTGATGCTAGCCTTGAAAAGCTTGCAAAAGAAGA ACAGCGAGAAGCTATGGAGTCCGATGAGCGAGAAGGTTTGGTTAGAGAGTACCTTGATATGCTTTTACCTGAGGATTGGG ACACCATGGATCTATATGAACGTCGAGCCTATATCAACGGGACTGAGTTTGGTGAAAGCCAAAGGGTTGGTGTTTGGAAA CGAAAATCTGTTTCTAATATGGAAATTTGGTGTGAATGCTTTGGAAAGGATCGAGCCAACCTTCGAAGAGTAGATGGTAA TGAAATATCAGCTATTATGGCGAGTATTGGAGGATGGACAGGTCTCGTTAAAAAAGAACGTATCCCGCTTTATGGACCAC AGTGGGTTTATGTTCCAAAAGAGTAA
Upstream 100 bases:
>100_bases GCTATATCTCAAAAGGGATGCAAGCAGAGATAAATAAAGCATCGAAGCATCGTATACCTATCCGGTATTTTTCTGAAAAC TGCGAGGAGGTGCAGAAGCT
Downstream 100 bases:
>100_bases TTCAGTTTGGAACACATGGAACAATTTTTTCTATGGAACAGATTTCAGCTGTTCCGGTGGAACAAAAACGGTCTTTTGGT ACATCTCATCGGAACAGGCG
Product: virulence-associated E family protein
Products: NA
Alternate protein names: Virulence-Associated Protein E; Virulence-Associated E; DNA Primase Domain Protein; Prophage Ps2 Protein; Prophage Lp3 Helicase; Phage Protein; Phage-Like Protein; TraC Domain-Containing Protein; Virulence-Associated Protein E Family Protein; Phage Integrase Protein; Phage-Related Virulence-Associated Protein E; Primase C Terminal 2 Family; Pyocin R2_PP TraC Domain Protein; APSE-2 Prophage; P-Loop ATPase And Inactivated Derivative; Imidazoleglycerol Phosphate Synthase; Virulence-Associated E Domain Protein; P-Loop ATPase And Inactivated Derivatives-Like; Virulence-Associated Protein E Domain-Containing Protein; Helicase; DNA Primase Domain-Containing Protein
Number of amino acids: Translated: 781; Mature: 781
Protein sequence:
>781_residues MKIAVGNSRMDKKWKNNDITWEDFISRVKSTIRTTETVSEFRKMSRAQQDSIKDVGGFVGGALREGKRRNGYVLSRSLLT LDMDYAKPEVWEQIEALHDFKCCIYSTHKHTPDAPRLRLIIPLKREVTEDEYPALGRMVAKEIGIDLFDDTTYEPSRLMY WPSTPSDGEFVFKEKDGELLDPDIYLSKYVDWRDTSMWPVSSRQSEVVQRKITKQADPLIKEGVIGAFCRAYNIEEAIEE FLPDVYEPSTMNGRFDYIPADSSAGLVIYDGKFAYSHHATDPACGMLLNAFDLVRVHKFRELDEKVTENTPPSKLPSFRA MTDLALEDERVKEQFAEERKAQVEKEFIDEDWEKQLEIDKTGTVKNTLRNLILILENDPNLKSIVFNQLSDSLEIKGDVP WPHPSKFWRDADDAQLISYIDTHYGTFSARNYDVAVAKVADDRSYHPIREFIEALPEWDKVARVDTLLIDYLGASDNPYV RAVTRKTLCAAISRVLTPGIKFDSMLVLNGPQGVGKSTLIAKLGGDWFSDSLSLSDTKDKTAAEKLQGYWILEIGELAGL KKAEVETLRSFLSRQNDIYRASFGKRATPHLRQCVFFGTTNAEKGYLRDTTGNRRFWPVKTPGNGTKKSWQLKQDEILQI WAEALTYVKAGEKLYLDASLEKLAKEEQREAMESDEREGLVREYLDMLLPEDWDTMDLYERRAYINGTEFGESQRVGVWK RKSVSNMEIWCECFGKDRANLRRVDGNEISAIMASIGGWTGLVKKERIPLYGPQWVYVPKE
Sequences:
>Translated_781_residues MKIAVGNSRMDKKWKNNDITWEDFISRVKSTIRTTETVSEFRKMSRAQQDSIKDVGGFVGGALREGKRRNGYVLSRSLLT LDMDYAKPEVWEQIEALHDFKCCIYSTHKHTPDAPRLRLIIPLKREVTEDEYPALGRMVAKEIGIDLFDDTTYEPSRLMY WPSTPSDGEFVFKEKDGELLDPDIYLSKYVDWRDTSMWPVSSRQSEVVQRKITKQADPLIKEGVIGAFCRAYNIEEAIEE FLPDVYEPSTMNGRFDYIPADSSAGLVIYDGKFAYSHHATDPACGMLLNAFDLVRVHKFRELDEKVTENTPPSKLPSFRA MTDLALEDERVKEQFAEERKAQVEKEFIDEDWEKQLEIDKTGTVKNTLRNLILILENDPNLKSIVFNQLSDSLEIKGDVP WPHPSKFWRDADDAQLISYIDTHYGTFSARNYDVAVAKVADDRSYHPIREFIEALPEWDKVARVDTLLIDYLGASDNPYV RAVTRKTLCAAISRVLTPGIKFDSMLVLNGPQGVGKSTLIAKLGGDWFSDSLSLSDTKDKTAAEKLQGYWILEIGELAGL KKAEVETLRSFLSRQNDIYRASFGKRATPHLRQCVFFGTTNAEKGYLRDTTGNRRFWPVKTPGNGTKKSWQLKQDEILQI WAEALTYVKAGEKLYLDASLEKLAKEEQREAMESDEREGLVREYLDMLLPEDWDTMDLYERRAYINGTEFGESQRVGVWK RKSVSNMEIWCECFGKDRANLRRVDGNEISAIMASIGGWTGLVKKERIPLYGPQWVYVPKE >Mature_781_residues MKIAVGNSRMDKKWKNNDITWEDFISRVKSTIRTTETVSEFRKMSRAQQDSIKDVGGFVGGALREGKRRNGYVLSRSLLT LDMDYAKPEVWEQIEALHDFKCCIYSTHKHTPDAPRLRLIIPLKREVTEDEYPALGRMVAKEIGIDLFDDTTYEPSRLMY WPSTPSDGEFVFKEKDGELLDPDIYLSKYVDWRDTSMWPVSSRQSEVVQRKITKQADPLIKEGVIGAFCRAYNIEEAIEE FLPDVYEPSTMNGRFDYIPADSSAGLVIYDGKFAYSHHATDPACGMLLNAFDLVRVHKFRELDEKVTENTPPSKLPSFRA MTDLALEDERVKEQFAEERKAQVEKEFIDEDWEKQLEIDKTGTVKNTLRNLILILENDPNLKSIVFNQLSDSLEIKGDVP WPHPSKFWRDADDAQLISYIDTHYGTFSARNYDVAVAKVADDRSYHPIREFIEALPEWDKVARVDTLLIDYLGASDNPYV RAVTRKTLCAAISRVLTPGIKFDSMLVLNGPQGVGKSTLIAKLGGDWFSDSLSLSDTKDKTAAEKLQGYWILEIGELAGL KKAEVETLRSFLSRQNDIYRASFGKRATPHLRQCVFFGTTNAEKGYLRDTTGNRRFWPVKTPGNGTKKSWQLKQDEILQI WAEALTYVKAGEKLYLDASLEKLAKEEQREAMESDEREGLVREYLDMLLPEDWDTMDLYERRAYINGTEFGESQRVGVWK RKSVSNMEIWCECFGKDRANLRRVDGNEISAIMASIGGWTGLVKKERIPLYGPQWVYVPKE
Specific function: Unknown
COG id: COG5545
COG function: function code R; Predicted P-loop ATPase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 89549; Mature: 89549
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIAVGNSRMDKKWKNNDITWEDFISRVKSTIRTTETVSEFRKMSRAQQDSIKDVGGFVG CEEECCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GALREGKRRNGYVLSRSLLTLDMDYAKPEVWEQIEALHDFKCCIYSTHKHTPDAPRLRLI HHHHCCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHEEEECCCCCCCCCCEEEE IPLKREVTEDEYPALGRMVAKEIGIDLFDDTTYEPSRLMYWPSTPSDGEFVFKEKDGELL EECHHHCCCCCCHHHHHHHHHHHCCEEECCCCCCCCEEEECCCCCCCCCEEEEECCCCCC DPDIYLSKYVDWRDTSMWPVSSRQSEVVQRKITKQADPLIKEGVIGAFCRAYNIEEAIEE CCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHH FLPDVYEPSTMNGRFDYIPADSSAGLVIYDGKFAYSHHATDPACGMLLNAFDLVRVHKFR HCCHHCCCCCCCCEEEEECCCCCCCEEEECCEEEECCCCCCHHHHHHHHHHHHHHHHHHH ELDEKVTENTPPSKLPSFRAMTDLALEDERVKEQFAEERKAQVEKEFIDEDWEKQLEIDK HHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCC TGTVKNTLRNLILILENDPNLKSIVFNQLSDSLEIKGDVPWPHPSKFWRDADDAQLISYI CCCHHHHHHCEEEEECCCCCHHHHHHHHHCCCEEEECCCCCCCCHHHHCCCCHHHHHHHH DTHYGTFSARNYDVAVAKVADDRSYHPIREFIEALPEWDKVARVDTLLIDYLGASDNPYV HHHCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEE RAVTRKTLCAAISRVLTPGIKFDSMLVLNGPQGVGKSTLIAKLGGDWFSDSLSLSDTKDK EHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHCCCHHCCCCCCCCCCHH TAAEKLQGYWILEIGELAGLKKAEVETLRSFLSRQNDIYRASFGKRATPHLRQCVFFGTT HHHHHHCCEEEEEEHHHCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHEEEEECC NAEKGYLRDTTGNRRFWPVKTPGNGTKKSWQLKQDEILQIWAEALTYVKAGEKLYLDASL CCCCCCEECCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECHHH EKLAKEEQREAMESDEREGLVREYLDMLLPEDWDTMDLYERRAYINGTEFGESQRVGVWK HHHHHHHHHHHHHCHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCH RKSVSNMEIWCECFGKDRANLRRVDGNEISAIMASIGGWTGLVKKERIPLYGPQWVYVPK HCCCCCHHHHHHHHCCCCCCEEECCCHHHHHHHHHHCCHHHCCCCCCCCCCCCEEEEECC E C >Mature Secondary Structure MKIAVGNSRMDKKWKNNDITWEDFISRVKSTIRTTETVSEFRKMSRAQQDSIKDVGGFVG CEEECCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GALREGKRRNGYVLSRSLLTLDMDYAKPEVWEQIEALHDFKCCIYSTHKHTPDAPRLRLI HHHHCCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHEEEECCCCCCCCCCEEEE IPLKREVTEDEYPALGRMVAKEIGIDLFDDTTYEPSRLMYWPSTPSDGEFVFKEKDGELL EECHHHCCCCCCHHHHHHHHHHHCCEEECCCCCCCCEEEECCCCCCCCCEEEEECCCCCC DPDIYLSKYVDWRDTSMWPVSSRQSEVVQRKITKQADPLIKEGVIGAFCRAYNIEEAIEE CCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHH FLPDVYEPSTMNGRFDYIPADSSAGLVIYDGKFAYSHHATDPACGMLLNAFDLVRVHKFR HCCHHCCCCCCCCEEEEECCCCCCCEEEECCEEEECCCCCCHHHHHHHHHHHHHHHHHHH ELDEKVTENTPPSKLPSFRAMTDLALEDERVKEQFAEERKAQVEKEFIDEDWEKQLEIDK HHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCC TGTVKNTLRNLILILENDPNLKSIVFNQLSDSLEIKGDVPWPHPSKFWRDADDAQLISYI CCCHHHHHHCEEEEECCCCCHHHHHHHHHCCCEEEECCCCCCCCHHHHCCCCHHHHHHHH DTHYGTFSARNYDVAVAKVADDRSYHPIREFIEALPEWDKVARVDTLLIDYLGASDNPYV HHHCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEE RAVTRKTLCAAISRVLTPGIKFDSMLVLNGPQGVGKSTLIAKLGGDWFSDSLSLSDTKDK EHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHCCCHHCCCCCCCCCCHH TAAEKLQGYWILEIGELAGLKKAEVETLRSFLSRQNDIYRASFGKRATPHLRQCVFFGTT HHHHHHCCEEEEEEHHHCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHEEEEECC NAEKGYLRDTTGNRRFWPVKTPGNGTKKSWQLKQDEILQIWAEALTYVKAGEKLYLDASL CCCCCCEECCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECHHH EKLAKEEQREAMESDEREGLVREYLDMLLPEDWDTMDLYERRAYINGTEFGESQRVGVWK HHHHHHHHHHHHHCHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCH RKSVSNMEIWCECFGKDRANLRRVDGNEISAIMASIGGWTGLVKKERIPLYGPQWVYVPK HCCCCCHHHHHHHHCCCCCCEEECCCHHHHHHHHHHCCHHHCCCCCCCCCCCCEEEEECC E C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA