| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is 167039880
Identifier: 167039880
GI number: 167039880
Start: 1277094
End: 1277885
Strand: Direct
Name: 167039880
Synonym: Teth514_1235
Alternate gene names: NA
Gene position: 1277094-1277885 (Clockwise)
Preceding gene: 167039879
Following gene: 167039881
Centisome position: 51.97
GC content: 39.65
Gene sequence:
>792_bases ATGAACAAAATAACTTTATTCAACTATGAAGGCAACACAGTAAGAACAGTAATGAAGGATGGAAATCCTTGGTGGGTTCT AAAAGATGTATGTTCGGTACTAGACATTGGAAACAGTCGTGATGTTATGGCTCGTTTGGACAGTGATGAAAAGGGAGTCG ATATTATCGACACCCCTGGAGGAAAACAGGAAGTATCTATTATCAATGAAAGTGGTCTTTATAGCGTGATATTGGTTTCT CGAAAGCCAGAAGCTAAAAAGTTTAAGCGCTGGGTAACCCATGAGGTGCTTCCTTCAATCAGAAGGCATGGCCTTTATGC TACAGATGAGTTACTTGCTAATCCAGACTTTTTGATTCAGGCACTACAGGAGCTTAAAGCGGAAAGAGCTAAAAATGCTG AGTTAACTACTACCATTAGCATTCAAGAACAGCAAATTGCAGAAATGAAACCTAAAGCAAGTTATTACGATGTGGTACTT AACTGTAAGGATGCGGTGTCTATCACAACAATAGCCAAGGACTATGGAAAGTCAGGGCGCTGGTTTAATGAGTATCTGCA TAATTTAGGTGTTCAATTCCGTCAAGGGAAGATTTGGCTTCTATATCAAAAGTACGCTCAACATGGATATACGACGACAA AAACCCATACTTACCTTGGAAATGATGGGACGATGCATTCAAAGGTTCATACTTACTGGACTCAGAAAGGACGCTTGTTC ATTTATGAGCTTCTTAAGGATCATGGCATTTTACCATTGATTGAACAAGAGTCCGAATTCGAGGAGATGTAA
Upstream 100 bases:
>100_bases ATAAAAAAGATTAATTTGAGGGGGTTCGAAGCCTCCTCTTTTTTTGCTTATAGCTGAGGGCATGTTTTATCGCTCTACAA CTATATGCTGGAGGTTCGAT
Downstream 100 bases:
>100_bases CTTATGGATAGATATAACGCTGAAGGCTATCCAGATCCAACTGCAGCAGAAGCCTTGGAAAATATCATGCGTGAAGAAAA AGCAAAAAACTATAAACCTT
Product: prophage antirepressor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MNKITLFNYEGNTVRTVMKDGNPWWVLKDVCSVLDIGNSRDVMARLDSDEKGVDIIDTPGGKQEVSIINESGLYSVILVS RKPEAKKFKRWVTHEVLPSIRRHGLYATDELLANPDFLIQALQELKAERAKNAELTTTISIQEQQIAEMKPKASYYDVVL NCKDAVSITTIAKDYGKSGRWFNEYLHNLGVQFRQGKIWLLYQKYAQHGYTTTKTHTYLGNDGTMHSKVHTYWTQKGRLF IYELLKDHGILPLIEQESEFEEM
Sequences:
>Translated_263_residues MNKITLFNYEGNTVRTVMKDGNPWWVLKDVCSVLDIGNSRDVMARLDSDEKGVDIIDTPGGKQEVSIINESGLYSVILVS RKPEAKKFKRWVTHEVLPSIRRHGLYATDELLANPDFLIQALQELKAERAKNAELTTTISIQEQQIAEMKPKASYYDVVL NCKDAVSITTIAKDYGKSGRWFNEYLHNLGVQFRQGKIWLLYQKYAQHGYTTTKTHTYLGNDGTMHSKVHTYWTQKGRLF IYELLKDHGILPLIEQESEFEEM >Mature_263_residues MNKITLFNYEGNTVRTVMKDGNPWWVLKDVCSVLDIGNSRDVMARLDSDEKGVDIIDTPGGKQEVSIINESGLYSVILVS RKPEAKKFKRWVTHEVLPSIRRHGLYATDELLANPDFLIQALQELKAERAKNAELTTTISIQEQQIAEMKPKASYYDVVL NCKDAVSITTIAKDYGKSGRWFNEYLHNLGVQFRQGKIWLLYQKYAQHGYTTTKTHTYLGNDGTMHSKVHTYWTQKGRLF IYELLKDHGILPLIEQESEFEEM
Specific function: Unknown
COG id: COG3617
COG function: function code K; Prophage antirepressor
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Bro-N domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003497 - InterPro: IPR018876 [H]
Pfam domain/function: PF02498 Bro-N; PF10548 P22_AR_C [H]
EC number: NA
Molecular weight: Translated: 30267; Mature: 30267
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKITLFNYEGNTVRTVMKDGNPWWVLKDVCSVLDIGNSRDVMARLDSDEKGVDIIDTPG CCCEEEEEECCCEEEEEEECCCCEEEHHHHHHHHCCCCCCCEEEECCCCCCCCEEEECCC GKQEVSIINESGLYSVILVSRKPEAKKFKRWVTHEVLPSIRRHGLYATDELLANPDFLIQ CCEEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHH ALQELKAERAKNAELTTTISIQEQQIAEMKPKASYYDVVLNCKDAVSITTIAKDYGKSGR HHHHHHHHHCCCCEEEEEEEECHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCC WFNEYLHNLGVQFRQGKIWLLYQKYAQHGYTTTKTHTYLGNDGTMHSKVHTYWTQKGRLF HHHHHHHHCCCEEECCCEEEEEEHHHHCCCCCCCEEEEECCCCCCCCCEEEEECCCCCEE IYELLKDHGILPLIEQESEFEEM EEEHHHHCCCCEEECCCHHHCCC >Mature Secondary Structure MNKITLFNYEGNTVRTVMKDGNPWWVLKDVCSVLDIGNSRDVMARLDSDEKGVDIIDTPG CCCEEEEEECCCEEEEEEECCCCEEEHHHHHHHHCCCCCCCEEEECCCCCCCCEEEECCC GKQEVSIINESGLYSVILVSRKPEAKKFKRWVTHEVLPSIRRHGLYATDELLANPDFLIQ CCEEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHH ALQELKAERAKNAELTTTISIQEQQIAEMKPKASYYDVVLNCKDAVSITTIAKDYGKSGR HHHHHHHHHCCCCEEEEEEEECHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCC WFNEYLHNLGVQFRQGKIWLLYQKYAQHGYTTTKTHTYLGNDGTMHSKVHTYWTQKGRLF HHHHHHHHCCCEEECCCEEEEEEHHHHCCCCCCCEEEEECCCCCCCCCEEEEECCCCCEE IYELLKDHGILPLIEQESEFEEM EEEHHHHCCCCEEECCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]