| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is 167039872
Identifier: 167039872
GI number: 167039872
Start: 1268355
End: 1270133
Strand: Reverse
Name: 167039872
Synonym: Teth514_1227
Alternate gene names: NA
Gene position: 1270133-1268355 (Counterclockwise)
Preceding gene: 167039873
Following gene: 167039871
Centisome position: 51.69
GC content: 33.45
Gene sequence:
>1779_bases ATGACTAACCTATATATAAAAAAGCTAATTGTTTCCGGTGGTGGTAAAGAGCCTTCAGTTTTGGAATTTGATGAAGGATT AAATATTATATGTGGACCATCGAATACTGGAAAAAGTTATATCTTAGAATGTATCGACTACTTATTTGGCAGTGATAAAA TTCGTTTTGATAGAAGCACTGGCTACAATAATATCAAATTAATTGTTGCTACAGAAAACGGTAGTATTACATTGGATCGT GAATTAGATTCAAATAAAATTAGAGTTCATAGCAACAATCACAAGATTGAATCTGGAGATTATAGAACTAGTGGAAAAAA GAATATCAGTGATGTATGGTTAAGTCTTATAGGTATTGATAAGGAGCATTTTATTATAAAAAACTCAAGGTATGATAAAC AACGTCTTACCTGGAGGACTTTTTCACATATGTTTCTCATTAAGGAATCTATTGTTTTTCAAGAAGCTTCTATTATATTG CCAAGGCAAAATACAGCACATACCGCAGCTCTTTCTGCTCTCTTTTTCTTAATTACTGGTCAAGATTTTGCTGAATCTGA CCCAAAGGAAGAAAAAAAGATAAAAGAAGCTAGAAAAAAGGCTGTTGCTGATTATATTAACAAAAGGTTAAATGATTTTG CTGAACGTAAAAACGAGCTTAACAAGCTTCCAGTTGGAGATGAAGAGTACCTTCAAGAAAAAGTAGAAAATATACTTGTT GAAATCGCTAAAACGGAAGAAAAAATTGCTGATTCAGTTAACCGCAGCAAACAACTTCTAAAGGAAATTTATATTGTCAG CGATCAATTGGCTGAATGTAATACGCTGTATAACCGGTATAAGGCATTGAAGACTCAGTATGCATCTGATATCAAGAGAT TAACTTTTATTGTTGAAGGAGAGCTGCATAAAAGTAAAATACACCCAAATTCTAAATGCCCCTTCTGTGACAGCAGTATA TCCTCTTCTCAAAGAGGAGCTTCTTATGTTGAAGCATCACATGCTGAGCTACATAGAATACAACTCCAATTAGATGATTT ATTAGAAGCTGAGCAAGATCTAATAAAAGAACGTTCAACACTAGAGACTAAACTTGCGAGATTAAATAATGAAAAATCAG ATGTTGAATTACTCATTAATGATGAATTAAAACCCAAAATTGCTGGGCTTAGATCAACTTTATATGATTATCGAAGAGCC ATTGAAATTCGAAATGAATCAGTTGTTATTACCAAATATGAAACAACAATGAAATCCGAATTGTTTGAAGCAATGATGGA AGACGAATCAGCTGTAGAGTTTAAAATCAAGGCCTACTTTAATAACGAGATCATAGCAACATTGGACATCTATCTAAATA GAATCCTAGAAGCTTGTAAGTTTGATGGTTATAGCTCTGCTTATTTTGATTCAAGTTCCTTTGACATATTTATCAACGGG ACTCCCAAAGACACATATGGCAAAGGATATCGCGCTTTTTTAAATACGGTACTTGCCATTTCGCTTATGGAGTATCTAAC CGATAAAGGTAAATATGCACCTGAGCTATTGATTATTGACTCCCCTATTCTTTCTCTGAAGGAAAAAGAAGATGGTGTGG CATCTGACACAATGAAAGCTGCATTATTCCAATACCTATTAGACAACCAAAGTCATGGTCAAGTTATTATTGTAGAAAAT GATATTCCTGATTTAGATTATAGCAGTGCAAATGTGATTCAGTTTACTAAAGATGAATCGTATGGTCGTTACGGATTTTT GAATGGTGTACGCCAATAA
Upstream 100 bases:
>100_bases GTTTATTTGGTAAGGGAATTTATATCTAATAAAACAGAGCGTGAAGTTTTAGAATCTATAAATAAACGCTCCATATATTC GCTGCGGGAGGATTAATGAA
Downstream 100 bases:
>100_bases GAAATGAAATGGAGGCTTATTTAATGAGCAAAGATCAAAATCTAGAAAAATGGTCTTCAATGGATATTATTACAGATTAT CTGGGTGTAAGTCGTGAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: Phage Protein; Exonuclease
Number of amino acids: Translated: 592; Mature: 591
Protein sequence:
>592_residues MTNLYIKKLIVSGGGKEPSVLEFDEGLNIICGPSNTGKSYILECIDYLFGSDKIRFDRSTGYNNIKLIVATENGSITLDR ELDSNKIRVHSNNHKIESGDYRTSGKKNISDVWLSLIGIDKEHFIIKNSRYDKQRLTWRTFSHMFLIKESIVFQEASIIL PRQNTAHTAALSALFFLITGQDFAESDPKEEKKIKEARKKAVADYINKRLNDFAERKNELNKLPVGDEEYLQEKVENILV EIAKTEEKIADSVNRSKQLLKEIYIVSDQLAECNTLYNRYKALKTQYASDIKRLTFIVEGELHKSKIHPNSKCPFCDSSI SSSQRGASYVEASHAELHRIQLQLDDLLEAEQDLIKERSTLETKLARLNNEKSDVELLINDELKPKIAGLRSTLYDYRRA IEIRNESVVITKYETTMKSELFEAMMEDESAVEFKIKAYFNNEIIATLDIYLNRILEACKFDGYSSAYFDSSSFDIFING TPKDTYGKGYRAFLNTVLAISLMEYLTDKGKYAPELLIIDSPILSLKEKEDGVASDTMKAALFQYLLDNQSHGQVIIVEN DIPDLDYSSANVIQFTKDESYGRYGFLNGVRQ
Sequences:
>Translated_592_residues MTNLYIKKLIVSGGGKEPSVLEFDEGLNIICGPSNTGKSYILECIDYLFGSDKIRFDRSTGYNNIKLIVATENGSITLDR ELDSNKIRVHSNNHKIESGDYRTSGKKNISDVWLSLIGIDKEHFIIKNSRYDKQRLTWRTFSHMFLIKESIVFQEASIIL PRQNTAHTAALSALFFLITGQDFAESDPKEEKKIKEARKKAVADYINKRLNDFAERKNELNKLPVGDEEYLQEKVENILV EIAKTEEKIADSVNRSKQLLKEIYIVSDQLAECNTLYNRYKALKTQYASDIKRLTFIVEGELHKSKIHPNSKCPFCDSSI SSSQRGASYVEASHAELHRIQLQLDDLLEAEQDLIKERSTLETKLARLNNEKSDVELLINDELKPKIAGLRSTLYDYRRA IEIRNESVVITKYETTMKSELFEAMMEDESAVEFKIKAYFNNEIIATLDIYLNRILEACKFDGYSSAYFDSSSFDIFING TPKDTYGKGYRAFLNTVLAISLMEYLTDKGKYAPELLIIDSPILSLKEKEDGVASDTMKAALFQYLLDNQSHGQVIIVEN DIPDLDYSSANVIQFTKDESYGRYGFLNGVRQ >Mature_591_residues TNLYIKKLIVSGGGKEPSVLEFDEGLNIICGPSNTGKSYILECIDYLFGSDKIRFDRSTGYNNIKLIVATENGSITLDRE LDSNKIRVHSNNHKIESGDYRTSGKKNISDVWLSLIGIDKEHFIIKNSRYDKQRLTWRTFSHMFLIKESIVFQEASIILP RQNTAHTAALSALFFLITGQDFAESDPKEEKKIKEARKKAVADYINKRLNDFAERKNELNKLPVGDEEYLQEKVENILVE IAKTEEKIADSVNRSKQLLKEIYIVSDQLAECNTLYNRYKALKTQYASDIKRLTFIVEGELHKSKIHPNSKCPFCDSSIS SSQRGASYVEASHAELHRIQLQLDDLLEAEQDLIKERSTLETKLARLNNEKSDVELLINDELKPKIAGLRSTLYDYRRAI EIRNESVVITKYETTMKSELFEAMMEDESAVEFKIKAYFNNEIIATLDIYLNRILEACKFDGYSSAYFDSSSFDIFINGT PKDTYGKGYRAFLNTVLAISLMEYLTDKGKYAPELLIIDSPILSLKEKEDGVASDTMKAALFQYLLDNQSHGQVIIVEND IPDLDYSSANVIQFTKDESYGRYGFLNGVRQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67587; Mature: 67456
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNLYIKKLIVSGGGKEPSVLEFDEGLNIICGPSNTGKSYILECIDYLFGSDKIRFDRST CCCCEEEHHHHCCCCCCCCEEECCCCCEEEECCCCCCHHHHHHHHHHHHCCCCEEEECCC GYNNIKLIVATENGSITLDRELDSNKIRVHSNNHKIESGDYRTSGKKNISDVWLSLIGID CCCEEEEEEEECCCCEEEECCCCCCEEEEECCCCEECCCCCCCCCCCCHHHHHHHHHCCC KEHFIIKNSRYDKQRLTWRTFSHMFLIKESIVFQEASIILPRQNTAHTAALSALFFLITG CCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCHHHHHHHHHHHHHCC QDFAESDPKEEKKIKEARKKAVADYINKRLNDFAERKNELNKLPVGDEEYLQEKVENILV CHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH EIAKTEEKIADSVNRSKQLLKEIYIVSDQLAECNTLYNRYKALKTQYASDIKRLTFIVEG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEC ELHKSKIHPNSKCPFCDSSISSSQRGASYVEASHAELHRIQLQLDDLLEAEQDLIKERST CHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LETKLARLNNEKSDVELLINDELKPKIAGLRSTLYDYRRAIEIRNESVVITKYETTMKSE HHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHEECCCEEEEEEHHHHHHHH LFEAMMEDESAVEFKIKAYFNNEIIATLDIYLNRILEACKFDGYSSAYFDSSSFDIFING HHHHHHCCCCCEEEEEEEEECCCEEEHHHHHHHHHHHHHCCCCCCCCEECCCCCEEEEEC TPKDTYGKGYRAFLNTVLAISLMEYLTDKGKYAPELLIIDSPILSLKEKEDGVASDTMKA CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHCCCCCCHHHHHHH ALFQYLLDNQSHGQVIIVENDIPDLDYSSANVIQFTKDESYGRYGFLNGVRQ HHHHHHHCCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCCHHHHCCCC >Mature Secondary Structure TNLYIKKLIVSGGGKEPSVLEFDEGLNIICGPSNTGKSYILECIDYLFGSDKIRFDRST CCCEEEHHHHCCCCCCCCEEECCCCCEEEECCCCCCHHHHHHHHHHHHCCCCEEEECCC GYNNIKLIVATENGSITLDRELDSNKIRVHSNNHKIESGDYRTSGKKNISDVWLSLIGID CCCEEEEEEEECCCCEEEECCCCCCEEEEECCCCEECCCCCCCCCCCCHHHHHHHHHCCC KEHFIIKNSRYDKQRLTWRTFSHMFLIKESIVFQEASIILPRQNTAHTAALSALFFLITG CCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCHHHHHHHHHHHHHCC QDFAESDPKEEKKIKEARKKAVADYINKRLNDFAERKNELNKLPVGDEEYLQEKVENILV CHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH EIAKTEEKIADSVNRSKQLLKEIYIVSDQLAECNTLYNRYKALKTQYASDIKRLTFIVEG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEC ELHKSKIHPNSKCPFCDSSISSSQRGASYVEASHAELHRIQLQLDDLLEAEQDLIKERST CHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LETKLARLNNEKSDVELLINDELKPKIAGLRSTLYDYRRAIEIRNESVVITKYETTMKSE HHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHEECCCEEEEEEHHHHHHHH LFEAMMEDESAVEFKIKAYFNNEIIATLDIYLNRILEACKFDGYSSAYFDSSSFDIFING HHHHHHCCCCCEEEEEEEEECCCEEEHHHHHHHHHHHHHCCCCCCCCEECCCCCEEEEEC TPKDTYGKGYRAFLNTVLAISLMEYLTDKGKYAPELLIIDSPILSLKEKEDGVASDTMKA CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHCCCCCCHHHHHHH ALFQYLLDNQSHGQVIIVENDIPDLDYSSANVIQFTKDESYGRYGFLNGVRQ HHHHHHHCCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA