| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is cotJC [H]
Identifier: 167039858
GI number: 167039858
Start: 1255235
End: 1255807
Strand: Reverse
Name: cotJC [H]
Synonym: Teth514_1213
Alternate gene names: 167039858
Gene position: 1255807-1255235 (Counterclockwise)
Preceding gene: 167039859
Following gene: 167039854
Centisome position: 51.11
GC content: 37.35
Gene sequence:
>573_bases ATGTGGGTTTATGAAAAGAAACTACAATATCCTGCTAAAGTATGCAAACCAGATGTAAAAATGGCAAAATACCTCATCGC CCAATATGGAGGCCCTGATGGAGAATTGGCAGCCGCTTTAAGATATCAAACTCAGCGATTCGTCATGCCTACAGGAAAAG CAAAAGCAGTTTTGACAGACATTGCTACAGAAGAATTAGCACACCTTGAAATAATAGCAACTCTTGTTTTCAAGCTTTTA AAGGGAGTACCAGTAGAAATATTAAAAAGAGAAGGATTAGGGGAATACTATACAGAACATGATAGAGGCCTATTCTATGC AGATACAACAGGAATGTTATGGACCGCCGCCTATATCCAGGCTAAAGGAGATGCAATCGCTGATCTACACGAAGATATGG CAGCCGAAGAAAAAGCAAGAGCAACTTATGAACATTTAATAAATCTCACAGATGACCCTTGTGTAAAAGATACTCTAAGG TTTTTGAGAGAAAGGGAGATTGTACACTTTCAAAGATTTGGAGAAACTTTAGTACAGGTAAGAGAATATATGGAAAGTAA AAAATTCTTTTAA
Upstream 100 bases:
>100_bases GGGCCCTTGATGGTTTTTGGTCATTCACAAAGTCAATATCCTTGGAAATGGGTAGATGACCCATGGCCTTGGGAAATAGA ATATTGAGGAGGACTTTGCT
Downstream 100 bases:
>100_bases AAAAGTAGATGTATGTCTATTGGCATACATCTACCCATTTTCCTTCTACTATTTTATCAAGGTCTTCGACTTTTATGGTA GCAGCAGCATTTGTATCACC
Product: manganese containing catalase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MWVYEKKLQYPAKVCKPDVKMAKYLIAQYGGPDGELAAALRYQTQRFVMPTGKAKAVLTDIATEELAHLEIIATLVFKLL KGVPVEILKREGLGEYYTEHDRGLFYADTTGMLWTAAYIQAKGDAIADLHEDMAAEEKARATYEHLINLTDDPCVKDTLR FLREREIVHFQRFGETLVQVREYMESKKFF
Sequences:
>Translated_190_residues MWVYEKKLQYPAKVCKPDVKMAKYLIAQYGGPDGELAAALRYQTQRFVMPTGKAKAVLTDIATEELAHLEIIATLVFKLL KGVPVEILKREGLGEYYTEHDRGLFYADTTGMLWTAAYIQAKGDAIADLHEDMAAEEKARATYEHLINLTDDPCVKDTLR FLREREIVHFQRFGETLVQVREYMESKKFF >Mature_190_residues MWVYEKKLQYPAKVCKPDVKMAKYLIAQYGGPDGELAAALRYQTQRFVMPTGKAKAVLTDIATEELAHLEIIATLVFKLL KGVPVEILKREGLGEYYTEHDRGLFYADTTGMLWTAAYIQAKGDAIADLHEDMAAEEKARATYEHLINLTDDPCVKDTLR FLREREIVHFQRFGETLVQVREYMESKKFF
Specific function: The cotJ operon proteins affect spore coat composition. They are either required for the normal formation of the inner layers of the coat or are themselves structural components of the coat [H]
COG id: COG3546
COG function: function code P; Mn-containing catalase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the manganese catalase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007760 - InterPro: IPR012347 - InterPro: IPR009078 [H]
Pfam domain/function: PF05067 Mn_catalase [H]
EC number: NA
Molecular weight: Translated: 21831; Mature: 21831
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWVYEKKLQYPAKVCKPDVKMAKYLIAQYGGPDGELAAALRYQTQRFVMPTGKAKAVLTD CCCCHHHHCCCHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEECCCCCHHHHHHH IATEELAHLEIIATLVFKLLKGVPVEILKREGLGEYYTEHDRGLFYADTTGMLWTAAYIQ HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHCCCCEEEECCCCHHHHHHHHH AKGDAIADLHEDMAAEEKARATYEHLINLTDDPCVKDTLRFLREREIVHFQRFGETLVQV HCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH REYMESKKFF HHHHHHCCCC >Mature Secondary Structure MWVYEKKLQYPAKVCKPDVKMAKYLIAQYGGPDGELAAALRYQTQRFVMPTGKAKAVLTD CCCCHHHHCCCHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEECCCCCHHHHHHH IATEELAHLEIIATLVFKLLKGVPVEILKREGLGEYYTEHDRGLFYADTTGMLWTAAYIQ HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHCCCCEEEECCCCHHHHHHHHH AKGDAIADLHEDMAAEEKARATYEHLINLTDDPCVKDTLRFLREREIVHFQRFGETLVQV HCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH REYMESKKFF HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7768848; 9384377 [H]