| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is ytoI [H]
Identifier: 167039836
GI number: 167039836
Start: 1226850
End: 1228157
Strand: Direct
Name: ytoI [H]
Synonym: Teth514_1191
Alternate gene names: 167039836
Gene position: 1226850-1228157 (Clockwise)
Preceding gene: 167039835
Following gene: 167039837
Centisome position: 49.93
GC content: 34.79
Gene sequence:
>1308_bases ATGAAAAAAAATGAAATTGTATTGGAATATATAAAAAATTTACCTGAAGGCACAAAAATTTCAGTAAGAGGTCTTGCACA GACTTTACATATAAGTGAAGGTACCGCTTACAAAGCCATAAAGGATGCAGAAAATTTAATGCTTGTAACTACGATTCCAA GAGTAGGAACTATAAGAAGAAAACAAAAAGATCCATTTTTTGACCGTCTTACTTATGAGGTTATTACAGATGTAGTGGAA GGGACAGTATTAGGTGGTCATGGTGGAATGGGGATGGAACTTCACAAATTTTTAATTGGAGCCATGACCATTGATGAAAT GGTGAAGTACATATCACCAGGAGACCTTGTAATTTTGGGAAATAGGGAAGATGCACAGGAAGCGGCTTTGAAAGCAGGGG CAGCAGTGATGATTACAGGAGGTTTTGATACATTACCTCATATAAAAGAACTGGCGGATAAGCTTTCATTGCCGCTTATA TCTACTTCTTATGATACTTTTACTGTAGCGACTCTTATAAACAAGGCGATCAATGAAAGTATGACACGAAAAAAGATTTT GTACGTCAGCGATGTAATGACATATAATCCAATCTATATGACGCCTCAACAAACAGTAAAAGATTGGAAAAAATTATATA CAGAGACTAAACATACCAGATATCCCGTTGTTGATTCTAAAGGGATGTTAGTCGGTATGGTAACTTCAAGAGATGTTGCC ACTGCATCGGATGATGATAAAATTGGGAGTATTATGACTCCTAACCCTGTATTTGTAACGGATACTACTACGCTCTCTTA TGCAGCCCATCTGATGATATGGTGGAATGTAGAGATACTACCTGTGACTCGTGGCAGAGAATTGATAGGACTCATAAGCA GGGAAGATGTAATTAAGGCCCTACATTATACGACAAAACAGCCCCAGATTAGTGAAGCTATTCAAGATACAATTTTTAAA GATTTTGATATGGAAAAAATAGAAAATGGAGTAAAATTTAAAGGTAAGATCCCTTCGATGATGATTAACCAATTTGGTAC AGTAAGTAGCAGTGCTTTGATGATGTTAATGTGTGAATCTGGTATTTTTGCTATAACGCAGAATAAAAGATATGATGCGG TTTTAGATAATTTCTCAGTTTATTTTATTAAACCTATGCGTACAGAAGAATTAATAGAGGTTTTCGCAAAAATAATAGAA GTTAGTAATAATTTTAGTAAGTTGGAAATTCAAATCATTCATGAAAAAGAAGAAATTGCAAAGGCATTGATGTCTGTCAG ACTTTCTAAAAGAATAAAGATGGTTTAG
Upstream 100 bases:
>100_bases CTATAAAAGCATTGGTAGACCTTATTGAATCAAAATTCGGTGAGGAGTAAACAAAAAAGGTTTCTTTTTAGAAACCTTTT TTGTATAAAGGATGATAGTT
Downstream 100 bases:
>100_bases GTGATTATATCATGTTTGTCCATTTGCACGTTCATTCTGAATACAGTTTACTTGACGGTTCTTGCAGAATTAAAGATTTA ATTGCCAAAACTAAAGAGTT
Product: DRTGG domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 435; Mature: 435
Protein sequence:
>435_residues MKKNEIVLEYIKNLPEGTKISVRGLAQTLHISEGTAYKAIKDAENLMLVTTIPRVGTIRRKQKDPFFDRLTYEVITDVVE GTVLGGHGGMGMELHKFLIGAMTIDEMVKYISPGDLVILGNREDAQEAALKAGAAVMITGGFDTLPHIKELADKLSLPLI STSYDTFTVATLINKAINESMTRKKILYVSDVMTYNPIYMTPQQTVKDWKKLYTETKHTRYPVVDSKGMLVGMVTSRDVA TASDDDKIGSIMTPNPVFVTDTTTLSYAAHLMIWWNVEILPVTRGRELIGLISREDVIKALHYTTKQPQISEAIQDTIFK DFDMEKIENGVKFKGKIPSMMINQFGTVSSSALMMLMCESGIFAITQNKRYDAVLDNFSVYFIKPMRTEELIEVFAKIIE VSNNFSKLEIQIIHEKEEIAKALMSVRLSKRIKMV
Sequences:
>Translated_435_residues MKKNEIVLEYIKNLPEGTKISVRGLAQTLHISEGTAYKAIKDAENLMLVTTIPRVGTIRRKQKDPFFDRLTYEVITDVVE GTVLGGHGGMGMELHKFLIGAMTIDEMVKYISPGDLVILGNREDAQEAALKAGAAVMITGGFDTLPHIKELADKLSLPLI STSYDTFTVATLINKAINESMTRKKILYVSDVMTYNPIYMTPQQTVKDWKKLYTETKHTRYPVVDSKGMLVGMVTSRDVA TASDDDKIGSIMTPNPVFVTDTTTLSYAAHLMIWWNVEILPVTRGRELIGLISREDVIKALHYTTKQPQISEAIQDTIFK DFDMEKIENGVKFKGKIPSMMINQFGTVSSSALMMLMCESGIFAITQNKRYDAVLDNFSVYFIKPMRTEELIEVFAKIIE VSNNFSKLEIQIIHEKEEIAKALMSVRLSKRIKMV >Mature_435_residues MKKNEIVLEYIKNLPEGTKISVRGLAQTLHISEGTAYKAIKDAENLMLVTTIPRVGTIRRKQKDPFFDRLTYEVITDVVE GTVLGGHGGMGMELHKFLIGAMTIDEMVKYISPGDLVILGNREDAQEAALKAGAAVMITGGFDTLPHIKELADKLSLPLI STSYDTFTVATLINKAINESMTRKKILYVSDVMTYNPIYMTPQQTVKDWKKLYTETKHTRYPVVDSKGMLVGMVTSRDVA TASDDDKIGSIMTPNPVFVTDTTTLSYAAHLMIWWNVEILPVTRGRELIGLISREDVIKALHYTTKQPQISEAIQDTIFK DFDMEKIENGVKFKGKIPSMMINQFGTVSSSALMMLMCESGIFAITQNKRYDAVLDNFSVYFIKPMRTEELIEVFAKIIE VSNNFSKLEIQIIHEKEEIAKALMSVRLSKRIKMV
Specific function: Unknown
COG id: COG4109
COG function: function code K; Predicted transcriptional regulator containing CBS domains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000644 - InterPro: IPR010766 - InterPro: IPR000524 - InterPro: IPR006683 - InterPro: IPR011991 [H]
Pfam domain/function: PF03061 4HBT; PF00571 CBS; PF07085 DRTGG; PF00392 GntR [H]
EC number: NA
Molecular weight: Translated: 48903; Mature: 48903
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKNEIVLEYIKNLPEGTKISVRGLAQTLHISEGTAYKAIKDAENLMLVTTIPRVGTIRR CCCCHHHHHHHHCCCCCCEEEHEEHEEEEEECCCCHHHHHHCCCCEEEEEECCCCCCHHH KQKDPFFDRLTYEVITDVVEGTVLGGHGGMGMELHKFLIGAMTIDEMVKYISPGDLVILG HCCCCHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEC NREDAQEAALKAGAAVMITGGFDTLPHIKELADKLSLPLISTSYDTFTVATLINKAINES CCCCHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHH MTRKKILYVSDVMTYNPIYMTPQQTVKDWKKLYTETKHTRYPVVDSKGMLVGMVTSRDVA HHHHEEEEEEHHHCCCCEEECHHHHHHHHHHHHHCCCCCCCCEECCCCCEEEEEECCCCC TASDDDKIGSIMTPNPVFVTDTTTLSYAAHLMIWWNVEILPVTRGRELIGLISREDVIKA CCCCCCCCCCEECCCCEEEECCCHHHHHEEEEEEEEEEEEEECCCCHHHHHHHHHHHHHH LHYTTKQPQISEAIQDTIFKDFDMEKIENGVKFKGKIPSMMINQFGTVSSSALMMLMCES HHHCCCCCHHHHHHHHHHHCCCCHHHHCCCCEECCCCHHHHHHHCCCCCHHHHEEEEECC GIFAITQNKRYDAVLDNFSVYFIKPMRTEELIEVFAKIIEVSNNFSKLEIQIIHEKEEIA CEEEEECCCCHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEEEECHHHHH KALMSVRLSKRIKMV HHHHHHHHHHHHCCC >Mature Secondary Structure MKKNEIVLEYIKNLPEGTKISVRGLAQTLHISEGTAYKAIKDAENLMLVTTIPRVGTIRR CCCCHHHHHHHHCCCCCCEEEHEEHEEEEEECCCCHHHHHHCCCCEEEEEECCCCCCHHH KQKDPFFDRLTYEVITDVVEGTVLGGHGGMGMELHKFLIGAMTIDEMVKYISPGDLVILG HCCCCHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEC NREDAQEAALKAGAAVMITGGFDTLPHIKELADKLSLPLISTSYDTFTVATLINKAINES CCCCHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHH MTRKKILYVSDVMTYNPIYMTPQQTVKDWKKLYTETKHTRYPVVDSKGMLVGMVTSRDVA HHHHEEEEEEHHHCCCCEEECHHHHHHHHHHHHHCCCCCCCCEECCCCCEEEEEECCCCC TASDDDKIGSIMTPNPVFVTDTTTLSYAAHLMIWWNVEILPVTRGRELIGLISREDVIKA CCCCCCCCCCEECCCCEEEECCCHHHHHEEEEEEEEEEEEEECCCCHHHHHHHHHHHHHH LHYTTKQPQISEAIQDTIFKDFDMEKIENGVKFKGKIPSMMINQFGTVSSSALMMLMCES HHHCCCCCHHHHHHHHHHHCCCCHHHHCCCCEECCCCHHHHHHHCCCCCHHHHEEEEECC GIFAITQNKRYDAVLDNFSVYFIKPMRTEELIEVFAKIIEVSNNFSKLEIQIIHEKEEIA CEEEEECCCCHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEEEECHHHHH KALMSVRLSKRIKMV HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377 [H]