Definition Thermoanaerobacter sp. X514 chromosome, complete genome.
Accession NC_010320
Length 2,457,259

Click here to switch to the map view.

The map label for this gene is ymfM [H]

Identifier: 167039831

GI number: 167039831

Start: 1222606

End: 1223406

Strand: Direct

Name: ymfM [H]

Synonym: Teth514_1186

Alternate gene names: 167039831

Gene position: 1222606-1223406 (Clockwise)

Preceding gene: 167039830

Following gene: 167039832

Centisome position: 49.75

GC content: 32.46

Gene sequence:

>801_bases
ATGAAGGAATTGGGAGAATTTTTAAAAAGTGAAAGAATTAAAATGGGATTGACTCTTGAAGAAATTCAAGAAATAACTAA
AATACGGATACGCTATTTGAAAGCTATTGAAGATGGAGATTTTAGCGTAATGCCTGCACTTGTATATGCTAAGGGCTTTG
TAAAAAGTTACGCTGAGGCCTTAGGGTTAGATGGCAATGAGTTAGTAAAAAAGTATGAGTATTTGTTTCAGGAGAAAGAG
GAGGAAGCCATACCTAATATAGAGATCACATCTTATAAAAAAGAGAGAAGAGATTTTTCACAATTTTTTTTGACTTTAAA
AAAAGCAGTAATTGTTGTTTTAATAATAGGTATTATAGGATACGGTTTTTACTATTTTCTAATTCAAGTTAAAAAAGGAC
TTGCACCAATTCCACAACAAAATCAAAGTGAAGCTTCAACAATTTCGGAAGACAAAACAAATCTTCCACAGGAAAGCAAT
GTTTCTCAACTTACAGTAAAGACGTCGATTGAAAAAGTAGCAGAGACTTCTAAAAAAATAGAATATAAAGTTGTTCCCTT
TGGAGAAAGTTATAAAGTAGAAATAAGCGTACCTGGCGAAAAATGTTGGTTTAGTGTAAAAGTAGATGGAAATGTCGTTT
ATGAAGGCCTTATGACAAAGGATATGTCTAAAATTTTTGATGTAAAAGATAGTATTACTATCTTGATGGGTTATCCGCCA
GCTGTTAAAATAACTGTAGATGGTGAGGAGCTACCAACAGTGCAAACACCGTCACCAGTTACAATAAATATACATACATA
G

Upstream 100 bases:

>100_bases
AAATCATCCTTTTAATTTTTATTTTTCCGAAAATAATGAAGGAAAAATGTATTTTGTGTGGAATATATAATAAGTGGATG
GTTAGTAAGGGGTGATAGGT

Downstream 100 bases:

>100_bases
AAAGGGGAAAGAGATGATAAAAGAAGCTATATTTCATAAAAGCGATATGCCTTACGCATATCCACTGAATGAAAATCAAT
TAAAGATAGTACTAAGGACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MKELGEFLKSERIKMGLTLEEIQEITKIRIRYLKAIEDGDFSVMPALVYAKGFVKSYAEALGLDGNELVKKYEYLFQEKE
EEAIPNIEITSYKKERRDFSQFFLTLKKAVIVVLIIGIIGYGFYYFLIQVKKGLAPIPQQNQSEASTISEDKTNLPQESN
VSQLTVKTSIEKVAETSKKIEYKVVPFGESYKVEISVPGEKCWFSVKVDGNVVYEGLMTKDMSKIFDVKDSITILMGYPP
AVKITVDGEELPTVQTPSPVTINIHT

Sequences:

>Translated_266_residues
MKELGEFLKSERIKMGLTLEEIQEITKIRIRYLKAIEDGDFSVMPALVYAKGFVKSYAEALGLDGNELVKKYEYLFQEKE
EEAIPNIEITSYKKERRDFSQFFLTLKKAVIVVLIIGIIGYGFYYFLIQVKKGLAPIPQQNQSEASTISEDKTNLPQESN
VSQLTVKTSIEKVAETSKKIEYKVVPFGESYKVEISVPGEKCWFSVKVDGNVVYEGLMTKDMSKIFDVKDSITILMGYPP
AVKITVDGEELPTVQTPSPVTINIHT
>Mature_266_residues
MKELGEFLKSERIKMGLTLEEIQEITKIRIRYLKAIEDGDFSVMPALVYAKGFVKSYAEALGLDGNELVKKYEYLFQEKE
EEAIPNIEITSYKKERRDFSQFFLTLKKAVIVVLIIGIIGYGFYYFLIQVKKGLAPIPQQNQSEASTISEDKTNLPQESN
VSQLTVKTSIEKVAETSKKIEYKVVPFGESYKVEISVPGEKCWFSVKVDGNVVYEGLMTKDMSKIFDVKDSITILMGYPP
AVKITVDGEELPTVQTPSPVTINIHT

Specific function: Unknown

COG id: COG1426

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30093; Mature: 30093

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKELGEFLKSERIKMGLTLEEIQEITKIRIRYLKAIEDGDFSVMPALVYAKGFVKSYAEA
CHHHHHHHHHCHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
LGLDGNELVKKYEYLFQEKEEEAIPNIEITSYKKERRDFSQFFLTLKKAVIVVLIIGIIG
HCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YGFYYFLIQVKKGLAPIPQQNQSEASTISEDKTNLPQESNVSQLTVKTSIEKVAETSKKI
HHHHHHHHHHHHCCCCCCCCCCCHHHHHCCHHCCCCCCCCCCEEEHHHHHHHHHHHHHCE
EYKVVPFGESYKVEISVPGEKCWFSVKVDGNVVYEGLMTKDMSKIFDVKDSITILMGYPP
EEEEEECCCCEEEEEEECCCCEEEEEEECCCEEEHHHHHHHHHHHHCCCCCEEEEEECCC
AVKITVDGEELPTVQTPSPVTINIHT
EEEEEECCCCCCCCCCCCCEEEEEEC
>Mature Secondary Structure
MKELGEFLKSERIKMGLTLEEIQEITKIRIRYLKAIEDGDFSVMPALVYAKGFVKSYAEA
CHHHHHHHHHCHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
LGLDGNELVKKYEYLFQEKEEEAIPNIEITSYKKERRDFSQFFLTLKKAVIVVLIIGIIG
HCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YGFYYFLIQVKKGLAPIPQQNQSEASTISEDKTNLPQESNVSQLTVKTSIEKVAETSKKI
HHHHHHHHHHHHCCCCCCCCCCCHHHHHCCHHCCCCCCCCCCEEEHHHHHHHHHHHHHCE
EYKVVPFGESYKVEISVPGEKCWFSVKVDGNVVYEGLMTKDMSKIFDVKDSITILMGYPP
EEEEEECCCCEEEEEEECCCCEEEEEEECCCEEEHHHHHHHHHHHHCCCCCEEEEEECCC
AVKITVDGEELPTVQTPSPVTINIHT
EEEEEECCCCCCCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]