Click here to switch to the map view.

The map label for this gene is ybhK [C]

Identifier: 167039824

GI number: 167039824

Start: 1214420

End: 1215394

Strand: Direct

Name: ybhK [C]

Synonym: Teth514_1179

Alternate gene names: 167039824

Gene position: 1214420-1215394 (Clockwise)

Preceding gene: 167039823

Following gene: 167039825

Centisome position: 49.42

GC content: 35.69

Gene sequence:

>975_bases
ATGATTATGAAAAATAATTCTAAAGGAGGACCTCGTATTGTTGCTATTGGTGGAGGTACAGGGCTTTCTACTATGTTGAG
GGGGTTAAAATTTTATACAACTAATATTACTGCGGTAGTTACAGTAGCAGATGATGGCGGTGGCTCGGGAATCCTAAGAC
AGGATTTAGGGATACTGCCGCCTGGAGATATACGAAATTGTATACTGGCTTTAGCAAATACAGAGCCTACAATGGAACAA
CTTTTGCAGTACAGGTTTACTGAGGGAATGTTAAAAGGACAAAATTTTGGGAATTTGTTTTTGGCAGCCATGATAGGTAT
TTCTAAAAATTTTGAAGAAGCTGTAAAAAAGATGAGTGATGTGCTTGCTGTATCTGGAAAAGTTATTCCTGTAACTCTTA
ATGATGTAAGGCTTGTAGCAGAGCTGGAAAACGGGACTATTATTAAAGGGGAATCGCAAATTCCTGTTGTACAACAAAAA
GAAAACAGCAAGATAAAGAGGATATATATTGAACCTTCTCATGCAGCGCCTTTTGAAGAAGTGTTAGTGGATATATTAAA
TGCTGATGCCATTATATTGGGTCCTGGAAGTTTATATACAAGTGTAATACCTAATCTTTTGGTAGATGGAATGTGTGATG
CTATTGAAACCTCCAAAGCGGTTAAAATTTATGTATGTAATATCATGACACAGCCAGGAGAGACTTTGGGTTATACTGCT
TGTGACCATGTGAAGGCTCTTTTTGAACATGGGCTTAAATCTATAGATTACATTATTGTCAACAATGGCGAAATTCCTCA
TGATTATATGGAGCGCTATATAAAAGACATGTCACAACCTGTTGAATACGATAAAAATCAGTTAGAAAGAATGGGAATTA
AAGTAGTAGAAGAAAATTTAGTAGCTTTAAAAAAGGAATTTATAAGGCATAATGAGCAAAAGCTTGCAGAAGTGATTATA
AGCCTATTAGTATAA

Upstream 100 bases:

>100_bases
AAGCATAGGTCTGTTACTATTGCAAATGCCCTTTATGAGTTTCTAAAAAAAGAAGATTATTCTGTTATTTTGCACCATAG
AGATATAGGAGAGGAGTAAT

Downstream 100 bases:

>100_bases
ATGCAAAATTTTAGTCTATGTTGTACAAAAAAATATATTGACATTTGTTGAAATAAGATATACAATATTATTAAAAGCAA
GCGCAAGCGATTGCAATGAA

Product: hypothetical protein

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MIMKNNSKGGPRIVAIGGGTGLSTMLRGLKFYTTNITAVVTVADDGGGSGILRQDLGILPPGDIRNCILALANTEPTMEQ
LLQYRFTEGMLKGQNFGNLFLAAMIGISKNFEEAVKKMSDVLAVSGKVIPVTLNDVRLVAELENGTIIKGESQIPVVQQK
ENSKIKRIYIEPSHAAPFEEVLVDILNADAIILGPGSLYTSVIPNLLVDGMCDAIETSKAVKIYVCNIMTQPGETLGYTA
CDHVKALFEHGLKSIDYIIVNNGEIPHDYMERYIKDMSQPVEYDKNQLERMGIKVVEENLVALKKEFIRHNEQKLAEVII
SLLV

Sequences:

>Translated_324_residues
MIMKNNSKGGPRIVAIGGGTGLSTMLRGLKFYTTNITAVVTVADDGGGSGILRQDLGILPPGDIRNCILALANTEPTMEQ
LLQYRFTEGMLKGQNFGNLFLAAMIGISKNFEEAVKKMSDVLAVSGKVIPVTLNDVRLVAELENGTIIKGESQIPVVQQK
ENSKIKRIYIEPSHAAPFEEVLVDILNADAIILGPGSLYTSVIPNLLVDGMCDAIETSKAVKIYVCNIMTQPGETLGYTA
CDHVKALFEHGLKSIDYIIVNNGEIPHDYMERYIKDMSQPVEYDKNQLERMGIKVVEENLVALKKEFIRHNEQKLAEVII
SLLV
>Mature_324_residues
MIMKNNSKGGPRIVAIGGGTGLSTMLRGLKFYTTNITAVVTVADDGGGSGILRQDLGILPPGDIRNCILALANTEPTMEQ
LLQYRFTEGMLKGQNFGNLFLAAMIGISKNFEEAVKKMSDVLAVSGKVIPVTLNDVRLVAELENGTIIKGESQIPVVQQK
ENSKIKRIYIEPSHAAPFEEVLVDILNADAIILGPGSLYTSVIPNLLVDGMCDAIETSKAVKIYVCNIMTQPGETLGYTA
CDHVKALFEHGLKSIDYIIVNNGEIPHDYMERYIKDMSQPVEYDKNQLERMGIKVVEENLVALKKEFIRHNEQKLAEVII
SLLV

Specific function: Unknown

COG id: COG0391

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0052 family [H]

Homologues:

Organism=Escherichia coli, GI1786997, Length=253, Percent_Identity=33.9920948616601, Blast_Score=112, Evalue=5e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002882
- InterPro:   IPR010119 [H]

Pfam domain/function: PF01933 UPF0052 [H]

EC number: NA

Molecular weight: Translated: 35522; Mature: 35522

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIMKNNSKGGPRIVAIGGGTGLSTMLRGLKFYTTNITAVVTVADDGGGSGILRQDLGILP
CEECCCCCCCCEEEEEECCCCHHHHHHHHHEEEECEEEEEEEECCCCCCCCHHHCCCCCC
PGDIRNCILALANTEPTMEQLLQYRFTEGMLKGQNFGNLFLAAMIGISKNFEEAVKKMSD
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHH
VLAVSGKVIPVTLNDVRLVAELENGTIIKGESQIPVVQQKENSKIKRIYIEPSHAAPFEE
HHHHCCEEEEEEECCEEEEEEECCCEEEECCCCCCCEECCCCCCEEEEEEECCCCCCHHH
VLVDILNADAIILGPGSLYTSVIPNLLVDGMCDAIETSKAVKIYVCNIMTQPGETLGYTA
HHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCHH
CDHVKALFEHGLKSIDYIIVNNGEIPHDYMERYIKDMSQPVEYDKNQLERMGIKVVEENL
HHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
VALKKEFIRHNEQKLAEVIISLLV
HHHHHHHHHCCHHHHHHHHHHHHC
>Mature Secondary Structure
MIMKNNSKGGPRIVAIGGGTGLSTMLRGLKFYTTNITAVVTVADDGGGSGILRQDLGILP
CEECCCCCCCCEEEEEECCCCHHHHHHHHHEEEECEEEEEEEECCCCCCCCHHHCCCCCC
PGDIRNCILALANTEPTMEQLLQYRFTEGMLKGQNFGNLFLAAMIGISKNFEEAVKKMSD
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHH
VLAVSGKVIPVTLNDVRLVAELENGTIIKGESQIPVVQQKENSKIKRIYIEPSHAAPFEE
HHHHCCEEEEEEECCEEEEEEECCCEEEECCCCCCCEECCCCCCEEEEEEECCCCCCHHH
VLVDILNADAIILGPGSLYTSVIPNLLVDGMCDAIETSKAVKIYVCNIMTQPGETLGYTA
HHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCHH
CDHVKALFEHGLKSIDYIIVNNGEIPHDYMERYIKDMSQPVEYDKNQLERMGIKVVEENL
HHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
VALKKEFIRHNEQKLAEVIISLLV
HHHHHHHHHCCHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8195085 [H]