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The map label for this gene is ydaO [C]

Identifier: 167039805

GI number: 167039805

Start: 1196800

End: 1197702

Strand: Reverse

Name: ydaO [C]

Synonym: Teth514_1159

Alternate gene names: 167039805

Gene position: 1197702-1196800 (Counterclockwise)

Preceding gene: 167039806

Following gene: 167039804

Centisome position: 48.74

GC content: 33.44

Gene sequence:

>903_bases
TTGAAGTGCATAAGATGTAAGAAAAAAGCAGTTATCACTCTAAAAAGGCATAATGCAGCCTTCTGTGCTGAGTGTTTTTT
ACATTATTATAGAAACCAAGTCTTAAAAAACATTCAAAAAAATAAAATGTTTAAAAAAGACGATAGAGTTTTAGTGGTAG
TATCTGGCGGCAAAGATAGTATGGCTCTGTGGGACGTTCTAGTCAAGGAAGGTTATAACGTTGTCGCAATGTATATAAAT
CTTGGAATTGGAGAGTATTCAAACAGGTCTCAAGAGGTGGTTGAAAATTTTGCAAAGAAAAATAATCTTCCACTCATTGT
AAAAAATATTAAAGAAGAATTCGGGCTTGATATATACAAGCTTTCAAAGACTTTAAAACGAAGCCCCTGTTCCGTATGTG
GAACAATTAAAAGATACCTGTTTAACAAAGTAGCTTACGACAATGGATTTTCAGTTATTGCAACAGGTCACAATTTAGAT
GACGAAGCAGCAACACTTTTAGGCAATATTTTGAATTGGGGAGAAAGCTATCTTGCAAGACAGGGACCAGTTTTACCTCA
AACTCACCCGAAACTCATAAAAAAAGTAAAACCTCTTTATACTTTAACAGAAAAAGAAAACATGTATTACGTACTTTTAA
ACAAAATTGAATTTTTACATGAAGAGTGTCCTTATTCAGTTGGAGCTCGTTCAATTCTTTATAAAGAATTATTAAATGAA
CTGGAAGAAAAAAGTCCTGGCACAAAACAGCGTTTTTTGATTGGCTTCCTTGAAAAGGGCAAAAAACATTTCAAAGAGGT
AGAAAATATTGAATTGAAGGAATGCAAAACTTGTGGCCATGTCACAACAACGGAAGAATGTTCTTTTTGCAGACTTACAA
AAGTTTCTAATACCGTTAGCTAG

Upstream 100 bases:

>100_bases
AATGGAGAAATAGTTACTCCAGACGAAATTCTTCAAGATGATGATGTAGTAGAAATAATATCAGTAGTTTCTGGAGGTTA
GTAGAAGGAGGCTTTACCAA

Downstream 100 bases:

>100_bases
TGTAGAGATTGTACCTAAGGCTGGTAGTATAAAAAATTTTTAAAACCAGCCTTTTTTCTTACACAAAAGTCAACATTTAA
AATTACAAACAAAGTAAGGA

Product: PP-loop domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MKCIRCKKKAVITLKRHNAAFCAECFLHYYRNQVLKNIQKNKMFKKDDRVLVVVSGGKDSMALWDVLVKEGYNVVAMYIN
LGIGEYSNRSQEVVENFAKKNNLPLIVKNIKEEFGLDIYKLSKTLKRSPCSVCGTIKRYLFNKVAYDNGFSVIATGHNLD
DEAATLLGNILNWGESYLARQGPVLPQTHPKLIKKVKPLYTLTEKENMYYVLLNKIEFLHEECPYSVGARSILYKELLNE
LEEKSPGTKQRFLIGFLEKGKKHFKEVENIELKECKTCGHVTTTEECSFCRLTKVSNTVS

Sequences:

>Translated_300_residues
MKCIRCKKKAVITLKRHNAAFCAECFLHYYRNQVLKNIQKNKMFKKDDRVLVVVSGGKDSMALWDVLVKEGYNVVAMYIN
LGIGEYSNRSQEVVENFAKKNNLPLIVKNIKEEFGLDIYKLSKTLKRSPCSVCGTIKRYLFNKVAYDNGFSVIATGHNLD
DEAATLLGNILNWGESYLARQGPVLPQTHPKLIKKVKPLYTLTEKENMYYVLLNKIEFLHEECPYSVGARSILYKELLNE
LEEKSPGTKQRFLIGFLEKGKKHFKEVENIELKECKTCGHVTTTEECSFCRLTKVSNTVS
>Mature_300_residues
MKCIRCKKKAVITLKRHNAAFCAECFLHYYRNQVLKNIQKNKMFKKDDRVLVVVSGGKDSMALWDVLVKEGYNVVAMYIN
LGIGEYSNRSQEVVENFAKKNNLPLIVKNIKEEFGLDIYKLSKTLKRSPCSVCGTIKRYLFNKVAYDNGFSVIATGHNLD
DEAATLLGNILNWGESYLARQGPVLPQTHPKLIKKVKPLYTLTEKENMYYVLLNKIEFLHEECPYSVGARSILYKELLNE
LEEKSPGTKQRFLIGFLEKGKKHFKEVENIELKECKTCGHVTTTEECSFCRLTKVSNTVS

Specific function: Unknown

COG id: COG0037

COG function: function code D; Predicted ATPase of the PP-loop superfamily implicated in cell cycle control

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TtcA family [H]

Homologues:

Organism=Homo sapiens, GI222537719, Length=309, Percent_Identity=26.2135922330097, Blast_Score=101, Evalue=7e-22,
Organism=Caenorhabditis elegans, GI17540090, Length=302, Percent_Identity=29.8013245033113, Blast_Score=129, Evalue=2e-30,
Organism=Drosophila melanogaster, GI24651972, Length=297, Percent_Identity=28.956228956229, Blast_Score=124, Evalue=9e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012089
- InterPro:   IPR014729
- InterPro:   IPR011063
- InterPro:   IPR020554 [H]

Pfam domain/function: PF01171 ATP_bind_3 [H]

EC number: NA

Molecular weight: Translated: 34384; Mature: 34384

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKCIRCKKKAVITLKRHNAAFCAECFLHYYRNQVLKNIQKNKMFKKDDRVLVVVSGGKDS
CCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCH
MALWDVLVKEGYNVVAMYINLGIGEYSNRSQEVVENFAKKNNLPLIVKNIKEEFGLDIYK
HHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHH
LSKTLKRSPCSVCGTIKRYLFNKVAYDNGFSVIATGHNLDDEAATLLGNILNWGESYLAR
HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
QGPVLPQTHPKLIKKVKPLYTLTEKENMYYVLLNKIEFLHEECPYSVGARSILYKELLNE
CCCCCCCCCHHHHHHHCHHHEEECCCCEEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
LEEKSPGTKQRFLIGFLEKGKKHFKEVENIELKECKTCGHVTTTEECSFCRLTKVSNTVS
HHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MKCIRCKKKAVITLKRHNAAFCAECFLHYYRNQVLKNIQKNKMFKKDDRVLVVVSGGKDS
CCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCH
MALWDVLVKEGYNVVAMYINLGIGEYSNRSQEVVENFAKKNNLPLIVKNIKEEFGLDIYK
HHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHH
LSKTLKRSPCSVCGTIKRYLFNKVAYDNGFSVIATGHNLDDEAATLLGNILNWGESYLAR
HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
QGPVLPQTHPKLIKKVKPLYTLTEKENMYYVLLNKIEFLHEECPYSVGARSILYKELLNE
CCCCCCCCCHHHHHHHCHHHEEECCCCEEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
LEEKSPGTKQRFLIGFLEKGKKHFKEVENIELKECKTCGHVTTTEECSFCRLTKVSNTVS
HHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]