| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is malE [H]
Identifier: 167039748
GI number: 167039748
Start: 1140141
End: 1141514
Strand: Direct
Name: malE [H]
Synonym: Teth514_1099
Alternate gene names: 167039748
Gene position: 1140141-1141514 (Clockwise)
Preceding gene: 167039747
Following gene: 167039749
Centisome position: 46.4
GC content: 37.7
Gene sequence:
>1374_bases GTGGGTAAAACAAAAAAGTATCTTTCGTTGATGGTAGTTATTGTTTTTGCACTCACGATAATGTTGGCAGGGTGTGGAGG ACAAAAAACTTCCCAGTCATCTGAAGGAGCTCCAGCGCCTCAAACAGAAACTTCACAAAAGAAAGTAGAAGTTGTTTTCT GGCATAATATGAAGGTAGTGACTGATAGACAGTCTATTGAAGAAGCAGTTCAAATGTTTAACAAAGAACATCCGAACATT GAAGTAAAAGCGGTATTAGTTCCAGGTGACGAAACAGATGCAACGAAATTAATGACAGCTGTTGCAGCAGGGGAAGGACC TGACGTTTATTATCTTGATAGATTTACAGTAGCACAAAGAGCTCATGCAGGCATGTTAGAACCCTTAGAAGATTATCTAA CACAATTGGGTACAAATATTGATGACTTAAAGAGTAAATTTTTCGATTTTGCAATTGAAGAAGCAACTTATAAAGGAAAA CTTTATGCACTTCCGTGGGATACTGATGCACGTGTTTTATATTATAATAAAAAATTATTTAAAGAAGCAGGATTAGATCC GGAAAGACCACCACAAACTATATCAGAACTCGATGAATATGCTAACAAACTCACGAAAGTGCAAGGGGGAAAAATTTTGC AAATAGGTTTTATTCCTTGGCGTGGTCAAGGATGGCCTTACACTTGGGGTTGGGTATTTGGAGGAAAATTTTATGATCAT GAAACCAAAAAATTTACTTTTGCAGATGATCCTAAGATTGTTGCTTCACTAGAATGGCAGAAAACCTATGCTGATAAATA TGGAATAAAAAATATTGATTCTTTCTTTGCTGCTTTTGGGGATGGTGGAGGAGCAGAGCCTGTTGATCCATTTATGATGG GAAAAGAAGCTATGAGGATAGATGGTAACTGGTTTTTGAGCACGCTGAGAAAATTTGCAGATCCTAAAGTATGTGAATGG GGAATAGCTCCAATACCATATCCTGGAGGTAGGGAAAAAGATTCAACTTGGGCAGGAGGTTGGAGTTTAGTTATTCCAAA AGGTGCAAAACATCCAAAAGAAGCAGCTGAATTTATTCAATGGATGGCTACAAAGGGTGCTATAAAATATGCCAAAGATA CTGCTCATTTTTCTGCAATTAAAGAAGGTACATTGGAGGTTGTAAAAGAAGATCCAGATCAAAAATTGTTTTATGAACTT TTAAATGGCCCCAATGCTCACAGCCGCCCTGTTGTACCAGTAGGAGCACTTGTTTGGGATGAGTTAGTAAGGGCTAGAGA TGACGCACTTTATGGTAAAAAAGTACCTCAACAGGCTTTGAAAGAAGCACAAGAGAAAGTTCAAAAAGAACTTGATAAAG CTCTGAGTGAATAA
Upstream 100 bases:
>100_bases AAAAAAGGGAATTCCTTTGAAATAGAGAGTAGAACCATTTAAACAATTTTGTGGTTCTACAATAGCAAATATGAATAAAA TAAAAAGGGGGATGAATGTT
Downstream 100 bases:
>100_bases AAAGGATAAATATTTTAACCTCAGCCTTGCTTTTTGTAAAGGGCAAGGCTGAGGAAAGTAAGGAAAAGGAGGCTCAATAT TGAATGTTTAAAACAAAAAA
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: MMBP; Maltodextrin-binding protein [H]
Number of amino acids: Translated: 457; Mature: 456
Protein sequence:
>457_residues MGKTKKYLSLMVVIVFALTIMLAGCGGQKTSQSSEGAPAPQTETSQKKVEVVFWHNMKVVTDRQSIEEAVQMFNKEHPNI EVKAVLVPGDETDATKLMTAVAAGEGPDVYYLDRFTVAQRAHAGMLEPLEDYLTQLGTNIDDLKSKFFDFAIEEATYKGK LYALPWDTDARVLYYNKKLFKEAGLDPERPPQTISELDEYANKLTKVQGGKILQIGFIPWRGQGWPYTWGWVFGGKFYDH ETKKFTFADDPKIVASLEWQKTYADKYGIKNIDSFFAAFGDGGGAEPVDPFMMGKEAMRIDGNWFLSTLRKFADPKVCEW GIAPIPYPGGREKDSTWAGGWSLVIPKGAKHPKEAAEFIQWMATKGAIKYAKDTAHFSAIKEGTLEVVKEDPDQKLFYEL LNGPNAHSRPVVPVGALVWDELVRARDDALYGKKVPQQALKEAQEKVQKELDKALSE
Sequences:
>Translated_457_residues MGKTKKYLSLMVVIVFALTIMLAGCGGQKTSQSSEGAPAPQTETSQKKVEVVFWHNMKVVTDRQSIEEAVQMFNKEHPNI EVKAVLVPGDETDATKLMTAVAAGEGPDVYYLDRFTVAQRAHAGMLEPLEDYLTQLGTNIDDLKSKFFDFAIEEATYKGK LYALPWDTDARVLYYNKKLFKEAGLDPERPPQTISELDEYANKLTKVQGGKILQIGFIPWRGQGWPYTWGWVFGGKFYDH ETKKFTFADDPKIVASLEWQKTYADKYGIKNIDSFFAAFGDGGGAEPVDPFMMGKEAMRIDGNWFLSTLRKFADPKVCEW GIAPIPYPGGREKDSTWAGGWSLVIPKGAKHPKEAAEFIQWMATKGAIKYAKDTAHFSAIKEGTLEVVKEDPDQKLFYEL LNGPNAHSRPVVPVGALVWDELVRARDDALYGKKVPQQALKEAQEKVQKELDKALSE >Mature_456_residues GKTKKYLSLMVVIVFALTIMLAGCGGQKTSQSSEGAPAPQTETSQKKVEVVFWHNMKVVTDRQSIEEAVQMFNKEHPNIE VKAVLVPGDETDATKLMTAVAAGEGPDVYYLDRFTVAQRAHAGMLEPLEDYLTQLGTNIDDLKSKFFDFAIEEATYKGKL YALPWDTDARVLYYNKKLFKEAGLDPERPPQTISELDEYANKLTKVQGGKILQIGFIPWRGQGWPYTWGWVFGGKFYDHE TKKFTFADDPKIVASLEWQKTYADKYGIKNIDSFFAAFGDGGGAEPVDPFMMGKEAMRIDGNWFLSTLRKFADPKVCEWG IAPIPYPGGREKDSTWAGGWSLVIPKGAKHPKEAAEFIQWMATKGAIKYAKDTAHFSAIKEGTLEVVKEDPDQKLFYELL NGPNAHSRPVVPVGALVWDELVRARDDALYGKKVPQQALKEAQEKVQKELDKALSE
Specific function: Involved in an abc transport system for maltotriose [H]
COG id: COG1653
COG function: function code G; ABC-type sugar transport system, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 1 family [H]
Homologues:
Organism=Escherichia coli, GI1789862, Length=439, Percent_Identity=24.1457858769932, Blast_Score=81, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006060 - InterPro: IPR006059 - InterPro: IPR006061 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 51174; Mature: 51043
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKTKKYLSLMVVIVFALTIMLAGCGGQKTSQSSEGAPAPQTETSQKKVEVVFWHNMKVV CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECEEEE TDRQSIEEAVQMFNKEHPNIEVKAVLVPGDETDATKLMTAVAAGEGPDVYYLDRFTVAQR ECHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCEEEECHHHHHHH AHAGMLEPLEDYLTQLGTNIDDLKSKFFDFAIEEATYKGKLYALPWDTDARVLYYNKKLF HHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEECHHHH KEAGLDPERPPQTISELDEYANKLTKVQGGKILQIGFIPWRGQGWPYTWGWVFGGKFYDH HHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCEEEEEEECCEEECC ETKKFTFADDPKIVASLEWQKTYADKYGIKNIDSFFAAFGDGGGAEPVDPFMMGKEAMRI CCCEEEECCCCCEEEEEEHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHCCHHEEE DGNWFLSTLRKFADPKVCEWGIAPIPYPGGREKDSTWAGGWSLVIPKGAKHPKEAAEFIQ CCHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHH WMATKGAIKYAKDTAHFSAIKEGTLEVVKEDPDQKLFYELLNGPNAHSRPVVPVGALVWD HHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHH ELVRARDDALYGKKVPQQALKEAQEKVQKELDKALSE HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GKTKKYLSLMVVIVFALTIMLAGCGGQKTSQSSEGAPAPQTETSQKKVEVVFWHNMKVV CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECEEEE TDRQSIEEAVQMFNKEHPNIEVKAVLVPGDETDATKLMTAVAAGEGPDVYYLDRFTVAQR ECHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCEEEECHHHHHHH AHAGMLEPLEDYLTQLGTNIDDLKSKFFDFAIEEATYKGKLYALPWDTDARVLYYNKKLF HHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEECHHHH KEAGLDPERPPQTISELDEYANKLTKVQGGKILQIGFIPWRGQGWPYTWGWVFGGKFYDH HHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCEEEEEEECCEEECC ETKKFTFADDPKIVASLEWQKTYADKYGIKNIDSFFAAFGDGGGAEPVDPFMMGKEAMRI CCCEEEECCCCCEEEEEEHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHCCHHEEE DGNWFLSTLRKFADPKVCEWGIAPIPYPGGREKDSTWAGGWSLVIPKGAKHPKEAAEFIQ CCHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHH WMATKGAIKYAKDTAHFSAIKEGTLEVVKEDPDQKLFYELLNGPNAHSRPVVPVGALVWD HHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHH ELVRARDDALYGKKVPQQALKEAQEKVQKELDKALSE HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12622808 [H]