| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
Click here to switch to the map view.
The map label for this gene is dicA [C]
Identifier: 167039610
GI number: 167039610
Start: 980750
End: 981148
Strand: Reverse
Name: dicA [C]
Synonym: Teth514_0958
Alternate gene names: 167039610
Gene position: 981148-980750 (Counterclockwise)
Preceding gene: 167039622
Following gene: 167039607
Centisome position: 39.93
GC content: 30.33
Gene sequence:
>399_bases ATGGATACAGTCGGCGAACGCATAAAATATGCTCGTAAAAAAAATAATTTAACTATAACAGCTTTGAGCAAACTCACAGG TTTATCTGTTGGAAATTTAAGTGACCTTGAAAATAACAAATCAATGCCTTCTTCCAATGCTTTGATAAAGTTAAAAAACG CTCTTAATGTTTCAATAGATTGGCTTCTTACTGGCCAACAAATAGAATATGTAAAAGAAGAAGAGGAAAAATACTTATCG AGAGAAGAGTTTGAAAGCATCAGTGAAAAGGATAAAATAATTTTTAAAGCCTTTGAAACATTGCCTGAGGAAAGAAAGAG AGATATAGAAGGATACATAAAAGTGAGTTTGAATACTACTGATTTAGAAGAGTTCATTAAAAAAGAAAAGAAAGTATAA
Upstream 100 bases:
>100_bases AAATAGATAATGATTAAAAATTAACTATTTTAAATATATATCTGAATTACGAAAATGTCAATACTAATATCGTAATTCAG AAAAACAAAGGAGGAGTGTT
Downstream 100 bases:
>100_bases TTTTAACCATTATGATTAATTATTAATCATAATGACAAAAGATTACGGCTGCATTTTGCAGCCGTAATCTTTACTCACCC ATGAACATTTTCATATCATC
Product: helix-turn-helix domain-containing protein
Products: NA
Alternate protein names: Transcriptional Regulator; Helix-Turn-Helix Domain Protein
Number of amino acids: Translated: 132; Mature: 132
Protein sequence:
>132_residues MDTVGERIKYARKKNNLTITALSKLTGLSVGNLSDLENNKSMPSSNALIKLKNALNVSIDWLLTGQQIEYVKEEEEKYLS REEFESISEKDKIIFKAFETLPEERKRDIEGYIKVSLNTTDLEEFIKKEKKV
Sequences:
>Translated_132_residues MDTVGERIKYARKKNNLTITALSKLTGLSVGNLSDLENNKSMPSSNALIKLKNALNVSIDWLLTGQQIEYVKEEEEKYLS REEFESISEKDKIIFKAFETLPEERKRDIEGYIKVSLNTTDLEEFIKKEKKV >Mature_132_residues MDTVGERIKYARKKNNLTITALSKLTGLSVGNLSDLENNKSMPSSNALIKLKNALNVSIDWLLTGQQIEYVKEEEEKYLS REEFESISEKDKIIFKAFETLPEERKRDIEGYIKVSLNTTDLEEFIKKEKKV
Specific function: This Protein Is A Repressor Of Division Inhibition Gene Dicb. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15233; Mature: 15233
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTVGERIKYARKKNNLTITALSKLTGLSVGNLSDLENNKSMPSSNALIKLKNALNVSID CCCHHHHHHHHHHCCCEEEEEEHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEE WLLTGQQIEYVKEEEEKYLSREEFESISEKDKIIFKAFETLPEERKRDIEGYIKVSLNTT EEEECCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCEEEEEEECHH DLEEFIKKEKKV HHHHHHHHHCCC >Mature Secondary Structure MDTVGERIKYARKKNNLTITALSKLTGLSVGNLSDLENNKSMPSSNALIKLKNALNVSID CCCHHHHHHHHHHCCCEEEEEEHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEE WLLTGQQIEYVKEEEEKYLSREEFESISEKDKIIFKAFETLPEERKRDIEGYIKVSLNTT EEEECCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCEEEEEEECHH DLEEFIKKEKKV HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA