Click here to switch to the map view.

The map label for this gene is cstA [H]

Identifier: 167039561

GI number: 167039561

Start: 933182

End: 934822

Strand: Direct

Name: cstA [H]

Synonym: Teth514_0909

Alternate gene names: 167039561

Gene position: 933182-934822 (Clockwise)

Preceding gene: 167039560

Following gene: 167039562

Centisome position: 37.98

GC content: 44.06

Gene sequence:

>1641_bases
ATGAGTGCAATAATTTTACTGATAAGTGCTATTATTCTTTTTGTACTTGCTTATATCTTTTACGGAGGCTGGCTTGCAAA
ACAGTGGGGTTTGCAGCCAGACAATAATACCCCTGCACACACCATGTATGATGGCGTGGACTATGTCCCTGCAAAGGCAC
CTGTCCTTCTGGGCCATCACTTTGCATCCATAGCCGGTGCCGGTCCTATAAACGGACCTATACAAGCCGCTATATTTGGA
TGGGTACCAGCAACACTCTGGATTCTTTTAGGCGGTATATTCCTAGGTGGAGCCCATGATTTTGGTTCACTTCTTGCATC
ATTGAGGCATAAGGGCAAGTCCATAGGTGATATCATACAAGCAAATGTTGGCTTGACAGCAAAGAGGTTGTTTCTTTTGT
TTTCCTGGTCGACACTGGTACTCATAGTTGCAGCCTTTACAAACATAGTGGCTGATACTTTTGTCTCTACACCCCAGGCA
GCCACTGCTTCACTGCTTTTTATACTATTTGCCGTGGTATTTGGATTTGCTGTATGCAGAAGGAATGCACCACTTGGCTT
GAGTACCGTGTTGGGTGTGGCGGCTTTGGCGTTATCTATATGGATAGGTTATATAGCCCCGTTATCATTGCCTAAGACCA
CATGGATAATCATCCTTGCCGTGTATATAGTAGCTGCATCAGTTATGCCTGTATGGATACTCCTGCAGCCAAGGGATTAC
TTGAACTCTTTCCTTCTCTATGGAATGATGATTGGCGGTGTTGTTGGTATACTGCTTTATAACCCGAGGATTCAACTTCC
AGCGTTTACAAGCTTTAAGGTTGGTACGCAGTATCTCTTCCCGATGCTGTTCATTACCATAGCATGCGGTGCCATATCCG
GTTTCCACTCACTGGTGGCCTCCGGCACCACAGCAAAACAGCTGGACAAAGAAGGGGATGCTAAGTTAATAGGCTATGGC
TCTATGCTTATAGAGAGCACCTTAGCCATAATTTCTATAATTACCGCAGCGTATCTTACTCAAGATAAGTTTGCAGAGCT
TATTAAGTTTGGTCCAACCAATGTGTTTGCTGATGGATTAGGTACATTCATGGCCAGCTTTGGTATAAATCAGGTTGTAG
GAAAGACCTTTGCTGCCCTTGCTGTGTCTGCATTTGCCATGACCACGCTGGATACAGCCACAAGGCTCGGCAGGTTTGCC
TTCCAGGAGTTTTTTGAAAATATATCGGAGTCTGGAGAGACAGTGGCATCTTCTAACCCTGTGGCTAAATTCTTTAGTGA
CAGGTATGTGGCATCTGTAATCACTGTGGTTATTTCTATTGTACTTGCATTTACAAGCTGGAAGGCTATATGGCCTATAT
TTGGTGCGGCTAACCAGCTCCTCGCAGCGGTAGCACTGCTGGCAGTGGCTGCATGGCTTGCCAATGCAGGTAGGAACAAT
AAAATGCTCATTATCCCTATGATATTTATGTTTATAGTTACTTTGACAGCCCTTGTACTTCTGATTCAATCTAATATTGC
TTCTGGTAACTATATACTGGTGTTATTTGCCGTCCTGCTGTTTATCCTGGCTATACTATTAATACTTCAAACATATGGAG
TGCTTACAGGAAAGAACAGAAGAGAAGGGGTAGCAAAATAG

Upstream 100 bases:

>100_bases
CAATAGGGTGGTGGCAAACAGGAAGGGAAGAGAGGTGATAAAGGATTTTATGATTCCTATGCCAAAGCCCAATTATAAAT
AAAAGGGAGGTAACATTTAA

Downstream 100 bases:

>100_bases
ATAAAAAGCCTGCCGCAGGGAAGGCTTTTTAAGTGCGCCCGGCATGGGCGATAGCTAGGCGGTGAAAGTCCGCTATGGCC
ATGGCGGTGGGAACCATTAG

Product: carbon starvation protein CstA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 546; Mature: 545

Protein sequence:

>546_residues
MSAIILLISAIILFVLAYIFYGGWLAKQWGLQPDNNTPAHTMYDGVDYVPAKAPVLLGHHFASIAGAGPINGPIQAAIFG
WVPATLWILLGGIFLGGAHDFGSLLASLRHKGKSIGDIIQANVGLTAKRLFLLFSWSTLVLIVAAFTNIVADTFVSTPQA
ATASLLFILFAVVFGFAVCRRNAPLGLSTVLGVAALALSIWIGYIAPLSLPKTTWIIILAVYIVAASVMPVWILLQPRDY
LNSFLLYGMMIGGVVGILLYNPRIQLPAFTSFKVGTQYLFPMLFITIACGAISGFHSLVASGTTAKQLDKEGDAKLIGYG
SMLIESTLAIISIITAAYLTQDKFAELIKFGPTNVFADGLGTFMASFGINQVVGKTFAALAVSAFAMTTLDTATRLGRFA
FQEFFENISESGETVASSNPVAKFFSDRYVASVITVVISIVLAFTSWKAIWPIFGAANQLLAAVALLAVAAWLANAGRNN
KMLIIPMIFMFIVTLTALVLLIQSNIASGNYILVLFAVLLFILAILLILQTYGVLTGKNRREGVAK

Sequences:

>Translated_546_residues
MSAIILLISAIILFVLAYIFYGGWLAKQWGLQPDNNTPAHTMYDGVDYVPAKAPVLLGHHFASIAGAGPINGPIQAAIFG
WVPATLWILLGGIFLGGAHDFGSLLASLRHKGKSIGDIIQANVGLTAKRLFLLFSWSTLVLIVAAFTNIVADTFVSTPQA
ATASLLFILFAVVFGFAVCRRNAPLGLSTVLGVAALALSIWIGYIAPLSLPKTTWIIILAVYIVAASVMPVWILLQPRDY
LNSFLLYGMMIGGVVGILLYNPRIQLPAFTSFKVGTQYLFPMLFITIACGAISGFHSLVASGTTAKQLDKEGDAKLIGYG
SMLIESTLAIISIITAAYLTQDKFAELIKFGPTNVFADGLGTFMASFGINQVVGKTFAALAVSAFAMTTLDTATRLGRFA
FQEFFENISESGETVASSNPVAKFFSDRYVASVITVVISIVLAFTSWKAIWPIFGAANQLLAAVALLAVAAWLANAGRNN
KMLIIPMIFMFIVTLTALVLLIQSNIASGNYILVLFAVLLFILAILLILQTYGVLTGKNRREGVAK
>Mature_545_residues
SAIILLISAIILFVLAYIFYGGWLAKQWGLQPDNNTPAHTMYDGVDYVPAKAPVLLGHHFASIAGAGPINGPIQAAIFGW
VPATLWILLGGIFLGGAHDFGSLLASLRHKGKSIGDIIQANVGLTAKRLFLLFSWSTLVLIVAAFTNIVADTFVSTPQAA
TASLLFILFAVVFGFAVCRRNAPLGLSTVLGVAALALSIWIGYIAPLSLPKTTWIIILAVYIVAASVMPVWILLQPRDYL
NSFLLYGMMIGGVVGILLYNPRIQLPAFTSFKVGTQYLFPMLFITIACGAISGFHSLVASGTTAKQLDKEGDAKLIGYGS
MLIESTLAIISIITAAYLTQDKFAELIKFGPTNVFADGLGTFMASFGINQVVGKTFAALAVSAFAMTTLDTATRLGRFAF
QEFFENISESGETVASSNPVAKFFSDRYVASVITVVISIVLAFTSWKAIWPIFGAANQLLAAVALLAVAAWLANAGRNNK
MLIIPMIFMFIVTLTALVLLIQSNIASGNYILVLFAVLLFILAILLILQTYGVLTGKNRREGVAK

Specific function: Peptide Utilization During Carbon Starvation. [C]

COG id: COG1966

COG function: function code T; Carbon starvation protein, predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CstA family [H]

Homologues:

Organism=Escherichia coli, GI1786814, Length=575, Percent_Identity=32, Blast_Score=253, Evalue=2e-68,
Organism=Escherichia coli, GI87082431, Length=434, Percent_Identity=33.4101382488479, Blast_Score=226, Evalue=3e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003706 [H]

Pfam domain/function: PF02554 CstA [H]

EC number: NA

Molecular weight: Translated: 58445; Mature: 58314

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAIILLISAIILFVLAYIFYGGWLAKQWGLQPDNNTPAHTMYDGVDYVPAKAPVLLGHH
CHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHH
FASIAGAGPINGPIQAAIFGWVPATLWILLGGIFLGGAHDFGSLLASLRHKGKSIGDIIQ
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHH
ANVGLTAKRLFLLFSWSTLVLIVAAFTNIVADTFVSTPQAATASLLFILFAVVFGFAVCR
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
RNAPLGLSTVLGVAALALSIWIGYIAPLSLPKTTWIIILAVYIVAASVMPVWILLQPRDY
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCHHH
LNSFLLYGMMIGGVVGILLYNPRIQLPAFTSFKVGTQYLFPMLFITIACGAISGFHSLVA
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGTTAKQLDKEGDAKLIGYGSMLIESTLAIISIITAAYLTQDKFAELIKFGPTNVFADGL
CCCHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
GTFMASFGINQVVGKTFAALAVSAFAMTTLDTATRLGRFAFQEFFENISESGETVASSNP
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
VAKFFSDRYVASVITVVISIVLAFTSWKAIWPIFGAANQLLAAVALLAVAAWLANAGRNN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KMLIIPMIFMFIVTLTALVLLIQSNIASGNYILVLFAVLLFILAILLILQTYGVLTGKNR
CEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
REGVAK
CCCCCC
>Mature Secondary Structure 
SAIILLISAIILFVLAYIFYGGWLAKQWGLQPDNNTPAHTMYDGVDYVPAKAPVLLGHH
HHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHH
FASIAGAGPINGPIQAAIFGWVPATLWILLGGIFLGGAHDFGSLLASLRHKGKSIGDIIQ
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHH
ANVGLTAKRLFLLFSWSTLVLIVAAFTNIVADTFVSTPQAATASLLFILFAVVFGFAVCR
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
RNAPLGLSTVLGVAALALSIWIGYIAPLSLPKTTWIIILAVYIVAASVMPVWILLQPRDY
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCHHH
LNSFLLYGMMIGGVVGILLYNPRIQLPAFTSFKVGTQYLFPMLFITIACGAISGFHSLVA
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGTTAKQLDKEGDAKLIGYGSMLIESTLAIISIITAAYLTQDKFAELIKFGPTNVFADGL
CCCHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
GTFMASFGINQVVGKTFAALAVSAFAMTTLDTATRLGRFAFQEFFENISESGETVASSNP
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
VAKFFSDRYVASVITVVISIVLAFTSWKAIWPIFGAANQLLAAVALLAVAAWLANAGRNN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KMLIIPMIFMFIVTLTALVLLIQSNIASGNYILVLFAVLLFILAILLILQTYGVLTGKNR
CEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
REGVAK
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]