Click here to switch to the map view.

The map label for this gene is secY [H]

Identifier: 167039539

GI number: 167039539

Start: 913737

End: 914993

Strand: Direct

Name: secY [H]

Synonym: Teth514_0886

Alternate gene names: 167039539

Gene position: 913737-914993 (Clockwise)

Preceding gene: 167039538

Following gene: 167039540

Centisome position: 37.19

GC content: 34.84

Gene sequence:

>1257_bases
GTGTTTCAAACCCTTGTCAATGCTTGGAATGTTGATGATGTAAGGAAAAGGATACTTTATACTTTGGGGATGTTAGTAAT
CTTTAGAGTGGGGTCTCATATTCCTGTGCCTGGAATTGACCCAAAAGTGATTGCTAACATACTTGGTCAAGGACAATTGT
TTGGATTTTTTGATATAATATCAGGTGGTGCTTTTAGTAATTTTACCATTTTTGCGATGAGCATTACACCCTACATCAAT
GCATCAATTATAATGCAACTTTTAACAATAGCAATTCCTTCTCTTGAGCAATTAGCCAAAGAAGGCGAAGAAGGAAGGAA
GAAAATTGCTCAGTATACCAGATATTTAACAGTTGTACTTGCCTTGATACAAGCTATAGGAATGACAATTGGGCTAAAGA
GTGCAGTTATCAACCCTACATTTTTTAACTTAACGGTCATCGTTATAACCTTAACTGCAGGTACTGCTTTTCTCATGTGG
TTAGGTGAAAAAATTACTGAAAATGGAATAGGCAACGGAAGTTCATTAATAATTTTTGCGGGGATAATTTCTAGGATTCC
TAACATGATATATCTGACAAGTCAATATATTCAAGCAGGTACTGCTAATATTTTTGGTGCTATTGCTTTTGTAGTAGCAG
AGCTCATAATGATAGTGTTAATAATCTTAGCTACAGAAGGCCAAAGAAGAATTCCTGTGCAATATGCAAAAAGGGTTGTT
GGCAGAAAAGTTTATGGTGGACAAAGTACTCACATTCCTATAAGAATAAACATGGCAGGGGTTATTCCTATCATATTTGC
TCTTTCACTATTACAGTTTCCGCAACAATTAGCAACCTTTTTCCCACGGTCGTCATTTTACAACTTTGTGCAAAAATGGC
TTAGCACAAGTGGGCTAATATACAATATTTTAGATATATTATTGATAATAGGATTTACTTATTTCTATACTGCAGTAATA
TTTAACCCTGTAGATGTATCGGATAATTTGAAAAAATATGGGGGCTTTATCCCTGGAATAAGGCCAGGTAAACCAACTAC
AGACTTTCTTACAAGGGTATTGAATAGAGTTACTTTTGTAGGAGCGTTATTCTTAGCATTTATTGCTACAATGCCAGTAA
TTTTAATGAATATAACAGGATTGCAGCTTTACTTTGGGGGTACAGCACTTTTAATTGCAGTTGGTGTAGCGCTTGATACT
ATGAAACAAATTGAAGGACATCTTATCATGAGGAATTATCAAGGATTTTTGAAATAA

Upstream 100 bases:

>100_bases
GGTGATTTAAATAAAAAGTTTACGGTAAGGGCTCATAAATTTAGCCAGAGTGCAATTGAAAAAATACAAGCCGTTGGGGG
AAAGGCAGAGGTGATTTAAA

Downstream 100 bases:

>100_bases
AAGGGGGAGGATTTATGAGAGTAATACTTTTAGGCCCCCCAGGTGCAGGCAAAGGGACGCAAGCTGTGAAAATTGCTAAG
GAGTTTGACATTCCTCACAT

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MFQTLVNAWNVDDVRKRILYTLGMLVIFRVGSHIPVPGIDPKVIANILGQGQLFGFFDIISGGAFSNFTIFAMSITPYIN
ASIIMQLLTIAIPSLEQLAKEGEEGRKKIAQYTRYLTVVLALIQAIGMTIGLKSAVINPTFFNLTVIVITLTAGTAFLMW
LGEKITENGIGNGSSLIIFAGIISRIPNMIYLTSQYIQAGTANIFGAIAFVVAELIMIVLIILATEGQRRIPVQYAKRVV
GRKVYGGQSTHIPIRINMAGVIPIIFALSLLQFPQQLATFFPRSSFYNFVQKWLSTSGLIYNILDILLIIGFTYFYTAVI
FNPVDVSDNLKKYGGFIPGIRPGKPTTDFLTRVLNRVTFVGALFLAFIATMPVILMNITGLQLYFGGTALLIAVGVALDT
MKQIEGHLIMRNYQGFLK

Sequences:

>Translated_418_residues
MFQTLVNAWNVDDVRKRILYTLGMLVIFRVGSHIPVPGIDPKVIANILGQGQLFGFFDIISGGAFSNFTIFAMSITPYIN
ASIIMQLLTIAIPSLEQLAKEGEEGRKKIAQYTRYLTVVLALIQAIGMTIGLKSAVINPTFFNLTVIVITLTAGTAFLMW
LGEKITENGIGNGSSLIIFAGIISRIPNMIYLTSQYIQAGTANIFGAIAFVVAELIMIVLIILATEGQRRIPVQYAKRVV
GRKVYGGQSTHIPIRINMAGVIPIIFALSLLQFPQQLATFFPRSSFYNFVQKWLSTSGLIYNILDILLIIGFTYFYTAVI
FNPVDVSDNLKKYGGFIPGIRPGKPTTDFLTRVLNRVTFVGALFLAFIATMPVILMNITGLQLYFGGTALLIAVGVALDT
MKQIEGHLIMRNYQGFLK
>Mature_418_residues
MFQTLVNAWNVDDVRKRILYTLGMLVIFRVGSHIPVPGIDPKVIANILGQGQLFGFFDIISGGAFSNFTIFAMSITPYIN
ASIIMQLLTIAIPSLEQLAKEGEEGRKKIAQYTRYLTVVLALIQAIGMTIGLKSAVINPTFFNLTVIVITLTAGTAFLMW
LGEKITENGIGNGSSLIIFAGIISRIPNMIYLTSQYIQAGTANIFGAIAFVVAELIMIVLIILATEGQRRIPVQYAKRVV
GRKVYGGQSTHIPIRINMAGVIPIIFALSLLQFPQQLATFFPRSSFYNFVQKWLSTSGLIYNILDILLIIGFTYFYTAVI
FNPVDVSDNLKKYGGFIPGIRPGKPTTDFLTRVLNRVTFVGALFLAFIATMPVILMNITGLQLYFGGTALLIAVGVALDT
MKQIEGHLIMRNYQGFLK

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=424, Percent_Identity=45.0471698113208, Blast_Score=340, Evalue=1e-94,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 46032; Mature: 46032

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: PS00755 SECY_1 ; PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFQTLVNAWNVDDVRKRILYTLGMLVIFRVGSHIPVPGIDPKVIANILGQGQLFGFFDII
CCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHH
SGGAFSNFTIFAMSITPYINASIIMQLLTIAIPSLEQLAKEGEEGRKKIAQYTRYLTVVL
CCCCCCCEEEEEEEECCHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHH
ALIQAIGMTIGLKSAVINPTFFNLTVIVITLTAGTAFLMWLGEKITENGIGNGSSLIIFA
HHHHHHHHHHHHHHHHCCCHHHHEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
GIISRIPNMIYLTSQYIQAGTANIFGAIAFVVAELIMIVLIILATEGQRRIPVQYAKRVV
HHHHHCCCCEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
GRKVYGGQSTHIPIRINMAGVIPIIFALSLLQFPQQLATFFPRSSFYNFVQKWLSTSGLI
CCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHH
YNILDILLIIGFTYFYTAVIFNPVDVSDNLKKYGGFIPGIRPGKPTTDFLTRVLNRVTFV
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
GALFLAFIATMPVILMNITGLQLYFGGTALLIAVGVALDTMKQIEGHLIMRNYQGFLK
HHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHCCHHEEEHHHHHCC
>Mature Secondary Structure
MFQTLVNAWNVDDVRKRILYTLGMLVIFRVGSHIPVPGIDPKVIANILGQGQLFGFFDII
CCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHH
SGGAFSNFTIFAMSITPYINASIIMQLLTIAIPSLEQLAKEGEEGRKKIAQYTRYLTVVL
CCCCCCCEEEEEEEECCHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHH
ALIQAIGMTIGLKSAVINPTFFNLTVIVITLTAGTAFLMWLGEKITENGIGNGSSLIIFA
HHHHHHHHHHHHHHHHCCCHHHHEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
GIISRIPNMIYLTSQYIQAGTANIFGAIAFVVAELIMIVLIILATEGQRRIPVQYAKRVV
HHHHHCCCCEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
GRKVYGGQSTHIPIRINMAGVIPIIFALSLLQFPQQLATFFPRSSFYNFVQKWLSTSGLI
CCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHH
YNILDILLIIGFTYFYTAVIFNPVDVSDNLKKYGGFIPGIRPGKPTTDFLTRVLNRVTFV
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
GALFLAFIATMPVILMNITGLQLYFGGTALLIAVGVALDTMKQIEGHLIMRNYQGFLK
HHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHHHCCHHEEEHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1512566; 10192928; 11058132 [H]