| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
Click here to switch to the map view.
The map label for this gene is 167039514
Identifier: 167039514
GI number: 167039514
Start: 900082
End: 900336
Strand: Direct
Name: 167039514
Synonym: Teth514_0861
Alternate gene names: NA
Gene position: 900082-900336 (Clockwise)
Preceding gene: 167039513
Following gene: 167039515
Centisome position: 36.63
GC content: 37.65
Gene sequence:
>255_bases ATGGCGGGACAAGATTGCCCTTCTAAGCGGGTGGTTGGAGCGAAGCAGACTCTAAAAGCAATAATGAATTGTAATGTACT TCAGGTCTACATTGCAAAAGATGCGGAAGAACATGTTACTAAAAAAATAAAAGAACTATGTGAGGAAAAATCAATTAAAA TAGTGTACGTCGATACTATGAAAGAACTTGGGGTAATGTGTGGTATTGATGTAAATGCTGCCGCTGCAGCGGATATTATA GGTGAAAAGAAATAA
Upstream 100 bases:
>100_bases ACTAAAGATTGAAACGAAATTCTACTGTTGACAGCTAAACTGCTTAATGATAAAATTATTAGGTGTGTTAAAAACCGCTG TCCTGATGGGAGGAAGGCGA
Downstream 100 bases:
>100_bases TTACCCCTTTGAGGGGGTAATTATTTCTTGATTTATTTGGAAGGAGGTGCAAAAATGCCAACAATAAATCAGTTAGTAAG ACAAGGAAGAAAGCCAGTAA
Product: putative L7Ae-like ribosomal protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 84; Mature: 83
Protein sequence:
>84_residues MAGQDCPSKRVVGAKQTLKAIMNCNVLQVYIAKDAEEHVTKKIKELCEEKSIKIVYVDTMKELGVMCGIDVNAAAAADII GEKK
Sequences:
>Translated_84_residues MAGQDCPSKRVVGAKQTLKAIMNCNVLQVYIAKDAEEHVTKKIKELCEEKSIKIVYVDTMKELGVMCGIDVNAAAAADII GEKK >Mature_83_residues AGQDCPSKRVVGAKQTLKAIMNCNVLQVYIAKDAEEHVTKKIKELCEEKSIKIVYVDTMKELGVMCGIDVNAAAAADIIG EKK
Specific function: Unknown
COG id: COG1358
COG function: function code J; Ribosomal protein HS6-type (S12/L30/L7a)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribosomal protein L7Ae family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004038 [H]
Pfam domain/function: PF01248 Ribosomal_L7Ae [H]
EC number: NA
Molecular weight: Translated: 9140; Mature: 9009
Theoretical pI: Translated: 7.92; Mature: 7.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 9.5 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 8.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGQDCPSKRVVGAKQTLKAIMNCNVLQVYIAKDAEEHVTKKIKELCEEKSIKIVYVDTM CCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHCCEEEEEECCH KELGVMCGIDVNAAAAADIIGEKK HHCCHHCCCCCCHHHHHHHHCCCC >Mature Secondary Structure AGQDCPSKRVVGAKQTLKAIMNCNVLQVYIAKDAEEHVTKKIKELCEEKSIKIVYVDTM CCCCCCCCCCCCHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHCCEEEEEECCH KELGVMCGIDVNAAAAADIIGEKK HHCCHHCCCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11997336 [H]