| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is gltX [H]
Identifier: 167039498
GI number: 167039498
Start: 881351
End: 882808
Strand: Direct
Name: gltX [H]
Synonym: Teth514_0844
Alternate gene names: 167039498
Gene position: 881351-882808 (Clockwise)
Preceding gene: 167039497
Following gene: 167039499
Centisome position: 35.87
GC content: 33.81
Gene sequence:
>1458_bases ATGAACAATTTGAGAGTTAGATTTGCGCCAAGCCCAACTGGAGCTATTCATATAGGGAATATAAGAACTGCTTTATTTAA TTATCTTTTTTCAAGAAGTGAAGGGGCTACTTTTGTTTTAAGGATTGAAGACACGGACTTAGAAAGGTCTTCAAAAGAGT TTGAAGAATTAATTTTTAAAGAATTAGAGTGGTTAGGTATAGAATGGGACGAAGGACCAGATAAACCAGGTCCCTATGGC CCTTATAGGCAAAGTGAAAGACTTGAAATTTATCATAAATTTGCCCAGAAACTTATTGAAGAAAAAAAGGCATATAGATG TTATTGTACTCCGGAGGAATTAGAAGAAGATAGAAGAAAGGCAGTAGAAAGAGGAGATATACCTCGTTATTCTGGAAGGT GTAGGTATCTTACAAAGGAGCAAGAAGAGGCTTTTATAAGAGAGGGAAGAAAACCTGTAATAAGGTTTATTATTCCTGAC GATGAAGTTATAGAGTTTGAAGACATGATAAAAGGAAAAATTACAATAAAAAGTGATACTTTAGGCGGGGACATGGTAAT TGTCAAATCAGACGGAATGCCTACTTACAATTTTGCAGTTGTAATAGATGACGCTCTTATGAAGATTACCCATGTCATAA GAGGAGAAGACCATATATACAATACTCCGAAACAGATACTCATTTACAAGGCTTTAGGATTTGAAATTCCTAAGTTTGCC CATGCGCCTTTAATATTGGGACCAGATAGGACTAAACTTTCTAAAAGGCATGGGAATACTTATATAGGCCAGTATAGAGA ATTGGGATATTTGCCAGAAGCTATGTTTAACTTTTTATCTCTTTTAAGTTGGTCACCGGAGGATAATGTAGAAATCATGT CAAAAGAAGAAATAATAAAGAAATTTAATTTCAGAAGGATTCACAGTGCTAATCCTGTCTTTGATATTGAAAAGCTTAAT TGGATGAATCAACAGTATATACAAAAAAGTTCTATTGAGAGAATTGTAGATTTGGCTATTCCACATTTAAGAAGGGCAGG ATACATTGACGGAATAGATGATATGGTGTATAATTGGCTAAAGGATGTAATATCCCTTTACAAAGATGGACTCCAATATG TGGCTCAAATTACTGAGAAAGCTAAGATGTTTTTTGTAGAAGAAGTTGAGTATTCTGATGAAACGGTGAAAATATTGAAT AGCCCAAATAGTAAAATTGTACTAGAAGTAGTTAAAAAAGTCATAGAGGAAGCTGATGAAATAACAGAGGAATATGTTAA AGATTTGCTTAAAAAATTGCAAAAAGAAACCAAGGTAAAAGGGAAAGAATTTTTCATGCCAATCAGAGTAGCAATAACAG GAGAAGACCATGGACCTGAATTGGTGAAGATTATTCCTCTTTTGGGGAAGGATAAAGTGATAAATAGGCTGAAAAAAGCG ATAAATTTAATAAAGTAA
Upstream 100 bases:
>100_bases TTTTACACACAATTGTCACTTCATCTATTTAAAAAGCGCAAAATTTGTTATAATTAAATCTAGTATAAAGTATTAACTAA AAAAGGATGGAGTGACACAC
Downstream 100 bases:
>100_bases AAAGCGATGAGGAGAAGAGTATTATAACATAAGCCTTCAGAGAAGAGCTACCATAGGCTGCGAGTAGCTCGAGGATATGT TATAAGAAGTGCATCTCCGA
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase 1; GluRS 1 [H]
Number of amino acids: Translated: 485; Mature: 485
Protein sequence:
>485_residues MNNLRVRFAPSPTGAIHIGNIRTALFNYLFSRSEGATFVLRIEDTDLERSSKEFEELIFKELEWLGIEWDEGPDKPGPYG PYRQSERLEIYHKFAQKLIEEKKAYRCYCTPEELEEDRRKAVERGDIPRYSGRCRYLTKEQEEAFIREGRKPVIRFIIPD DEVIEFEDMIKGKITIKSDTLGGDMVIVKSDGMPTYNFAVVIDDALMKITHVIRGEDHIYNTPKQILIYKALGFEIPKFA HAPLILGPDRTKLSKRHGNTYIGQYRELGYLPEAMFNFLSLLSWSPEDNVEIMSKEEIIKKFNFRRIHSANPVFDIEKLN WMNQQYIQKSSIERIVDLAIPHLRRAGYIDGIDDMVYNWLKDVISLYKDGLQYVAQITEKAKMFFVEEVEYSDETVKILN SPNSKIVLEVVKKVIEEADEITEEYVKDLLKKLQKETKVKGKEFFMPIRVAITGEDHGPELVKIIPLLGKDKVINRLKKA INLIK
Sequences:
>Translated_485_residues MNNLRVRFAPSPTGAIHIGNIRTALFNYLFSRSEGATFVLRIEDTDLERSSKEFEELIFKELEWLGIEWDEGPDKPGPYG PYRQSERLEIYHKFAQKLIEEKKAYRCYCTPEELEEDRRKAVERGDIPRYSGRCRYLTKEQEEAFIREGRKPVIRFIIPD DEVIEFEDMIKGKITIKSDTLGGDMVIVKSDGMPTYNFAVVIDDALMKITHVIRGEDHIYNTPKQILIYKALGFEIPKFA HAPLILGPDRTKLSKRHGNTYIGQYRELGYLPEAMFNFLSLLSWSPEDNVEIMSKEEIIKKFNFRRIHSANPVFDIEKLN WMNQQYIQKSSIERIVDLAIPHLRRAGYIDGIDDMVYNWLKDVISLYKDGLQYVAQITEKAKMFFVEEVEYSDETVKILN SPNSKIVLEVVKKVIEEADEITEEYVKDLLKKLQKETKVKGKEFFMPIRVAITGEDHGPELVKIIPLLGKDKVINRLKKA INLIK >Mature_485_residues MNNLRVRFAPSPTGAIHIGNIRTALFNYLFSRSEGATFVLRIEDTDLERSSKEFEELIFKELEWLGIEWDEGPDKPGPYG PYRQSERLEIYHKFAQKLIEEKKAYRCYCTPEELEEDRRKAVERGDIPRYSGRCRYLTKEQEEAFIREGRKPVIRFIIPD DEVIEFEDMIKGKITIKSDTLGGDMVIVKSDGMPTYNFAVVIDDALMKITHVIRGEDHIYNTPKQILIYKALGFEIPKFA HAPLILGPDRTKLSKRHGNTYIGQYRELGYLPEAMFNFLSLLSWSPEDNVEIMSKEEIIKKFNFRRIHSANPVFDIEKLN WMNQQYIQKSSIERIVDLAIPHLRRAGYIDGIDDMVYNWLKDVISLYKDGLQYVAQITEKAKMFFVEEVEYSDETVKILN SPNSKIVLEVVKKVIEEADEITEEYVKDLLKKLQKETKVKGKEFFMPIRVAITGEDHGPELVKIIPLLGKDKVINRLKKA INLIK
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) [H]
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI134288884, Length=514, Percent_Identity=31.7120622568093, Blast_Score=280, Evalue=3e-75, Organism=Escherichia coli, GI1788743, Length=481, Percent_Identity=39.0852390852391, Blast_Score=352, Evalue=3e-98, Organism=Escherichia coli, GI226510925, Length=250, Percent_Identity=34.4, Blast_Score=137, Evalue=1e-33, Organism=Escherichia coli, GI1786895, Length=215, Percent_Identity=26.046511627907, Blast_Score=67, Evalue=3e-12, Organism=Caenorhabditis elegans, GI71993394, Length=487, Percent_Identity=32.4435318275154, Blast_Score=254, Evalue=1e-67, Organism=Saccharomyces cerevisiae, GI6324540, Length=501, Percent_Identity=32.7345309381238, Blast_Score=264, Evalue=3e-71, Organism=Saccharomyces cerevisiae, GI6324742, Length=224, Percent_Identity=25.4464285714286, Blast_Score=78, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6321192, Length=332, Percent_Identity=24.6987951807229, Blast_Score=76, Evalue=1e-14, Organism=Drosophila melanogaster, GI24665321, Length=497, Percent_Identity=34.8088531187123, Blast_Score=290, Evalue=1e-78,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008925 - InterPro: IPR020751 - InterPro: IPR001412 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 [H]
Pfam domain/function: PF00749 tRNA-synt_1c [H]
EC number: =6.1.1.17 [H]
Molecular weight: Translated: 56472; Mature: 56472
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNLRVRFAPSPTGAIHIGNIRTALFNYLFSRSEGATFVLRIEDTDLERSSKEFEELIFK CCCCEEEECCCCCCEEEECHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHH ELEWLGIEWDEGPDKPGPYGPYRQSERLEIYHKFAQKLIEEKKAYRCYCTPEELEEDRRK HHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCEEEECCHHHHHHHHHH AVERGDIPRYSGRCRYLTKEQEEAFIREGRKPVIRFIIPDDEVIEFEDMIKGKITIKSDT HHHHCCCCCCCCCEEECCCHHHHHHHHCCCCCEEEEECCCCCEEEHHHHHCCEEEEEECC LGGDMVIVKSDGMPTYNFAVVIDDALMKITHVIRGEDHIYNTPKQILIYKALGFEIPKFA CCCCEEEEECCCCCCEEEEEEEHHHHHHHHHHHCCCCHHCCCCHHEEEEHHHCCCCCCCC HAPLILGPDRTKLSKRHGNTYIGQYRELGYLPEAMFNFLSLLSWSPEDNVEIMSKEEIIK CCCEEECCCHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEECHHHHHH KFNFRRIHSANPVFDIEKLNWMNQQYIQKSSIERIVDLAIPHLRRAGYIDGIDDMVYNWL HCCCCEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH KDVISLYKDGLQYVAQITEKAKMFFVEEVEYSDETVKILNSPNSKIVLEVVKKVIEEADE HHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHH ITEEYVKDLLKKLQKETKVKGKEFFMPIRVAITGEDHGPELVKIIPLLGKDKVINRLKKA HHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCHHHEECCCCCHHHHHHHHHH INLIK HHHCC >Mature Secondary Structure MNNLRVRFAPSPTGAIHIGNIRTALFNYLFSRSEGATFVLRIEDTDLERSSKEFEELIFK CCCCEEEECCCCCCEEEECHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHH ELEWLGIEWDEGPDKPGPYGPYRQSERLEIYHKFAQKLIEEKKAYRCYCTPEELEEDRRK HHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCEEEECCHHHHHHHHHH AVERGDIPRYSGRCRYLTKEQEEAFIREGRKPVIRFIIPDDEVIEFEDMIKGKITIKSDT HHHHCCCCCCCCCEEECCCHHHHHHHHCCCCCEEEEECCCCCEEEHHHHHCCEEEEEECC LGGDMVIVKSDGMPTYNFAVVIDDALMKITHVIRGEDHIYNTPKQILIYKALGFEIPKFA CCCCEEEEECCCCCCEEEEEEEHHHHHHHHHHHCCCCHHCCCCHHEEEEHHHCCCCCCCC HAPLILGPDRTKLSKRHGNTYIGQYRELGYLPEAMFNFLSLLSWSPEDNVEIMSKEEIIK CCCEEECCCHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEECHHHHHH KFNFRRIHSANPVFDIEKLNWMNQQYIQKSSIERIVDLAIPHLRRAGYIDGIDDMVYNWL HCCCCEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH KDVISLYKDGLQYVAQITEKAKMFFVEEVEYSDETVKILNSPNSKIVLEVVKKVIEEADE HHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHH ITEEYVKDLLKKLQKETKVKGKEFFMPIRVAITGEDHGPELVKIIPLLGKDKVINRLKKA HHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCHHHEECCCCCHHHHHHHHHH INLIK HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA