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The map label for this gene is gerKA [H]

Identifier: 167039457

GI number: 167039457

Start: 836277

End: 837812

Strand: Direct

Name: gerKA [H]

Synonym: Teth514_0803

Alternate gene names: 167039457

Gene position: 836277-837812 (Clockwise)

Preceding gene: 167039455

Following gene: 167039458

Centisome position: 34.03

GC content: 33.98

Gene sequence:

>1536_bases
ATGCCCCATAAGTTGCCTGATCCACAGTATGTAAAAGAAAATTATCAATATATGACTCTTAGCAAAAAATTAGAAGAAAA
TATATATATATTTCAAGTGCTTTTAAAAGGGAATAATGACATAGTTTTTAGGCAAATTAGCATAGGAGATAAAAAAGTTA
AAGCTTTTTTAGTATATGTAGATGGAATGGTAGATAAGTTGTTAATTACTCGAAATATTTTAGAGCCAATAATGATAGAG
ACAAGAAAGTTGAATAAAATCATATACACTAATGACCAACTCTTTAATTATATAAATGAATATTTTATAACAACTTCAGA
AGTAAATGTAAAAGATAAAATTGGAGATATAATAGACGACTTACTTTCTGGAGAGACAATACTTTTAATTGATGGAGTGG
AAAAAGCTTTAATTATCTCTACAAAGGGATGGGAAGGGAGAAATATAACTGAGTCTACTACAGAATCCTATGTAAGAGGT
CCTAAAGAGTCTTTTGTGGAGACTTTAAGAATAAATACTTCTATGCTAAGAAGGAGAATAAAACACCCTGATTTTGTAAT
TGAAAATATAAAAATTGGAAAGTATTCTAAAACAGATGTATCTATTGCTTATGTAAAAAGCATTGCTGATGATACAGTGG
TACAAGAAGTTAAAAAACGACTTAAAAAAGTACAAATTGATGGGGTTATTGATAGCGGTTATTTAGAAGAATTTATAGAG
GATAATCCTTTTTCTCCTTTTCCACAAATAGCTCATTCTGAAAAGCCAGACAAGGTGACTGCAGAAATTTTAGAAGGGAA
AGTGGCAATATTAGTTGATGGTTCACCTTTTGTATTAATAGTTCCTGCAGTATTTGTACAATTCTTTCAGGCTGCTGAAG
ATTATTATGAGAGGTATTTCTTGTCATCAGCTCTCAGAATTTTGAGAATTGCTGCGATGTTTATTGCTCTTTTATTTCCC
TCTATATACATTGCAGAAACTACTTTTCATCAAGAAATGATACCGACGCAACTAGCTATTTCTATTGCTGCTCAAAGGGA
AGGAGTGCCTTTTCCAGCACTTTTGGAGGCATTATTCATGGAAATAACCTTTGAAATTTTAAGGGAGGCGGGTATAAGAC
TTCCTATGCAAGTAGGACAAGCAGTAAGTATAGTAGGCGGTTTGGTAGTTGGGCAAGCAGCTGTTCAAGCAGGACTCGTG
TCTCCTGCAATGGTGATTGTAGTTGCAATGACAGGAATAGCTTCCTTTTCAATTCCTGCTTATAACGTTGCGATAACTTT
TAGGCTTTTGAGATTTATCATAATGATTGCAGCAGGAACTTTAGGCTTTTTTGGGATAATAATGGTGGTGATGATGATAC
TCGCCCATATGGCGTCATTGGAGTCTTTTGGAGTACCATACCTTTCACCTTTGACTCCAAGTAGGACACAAGAATTAAGC
GATGTATTAATAAGAATACCTTGGTGGGCAAAGATATTGAGGCCGCGAACTGTACAGAGAAAAAATATTATGAGGCAGGA
GGATACAAGAGGATAA

Upstream 100 bases:

>100_bases
ACATATCCGACTCCTAAACGTATTTTTTTTTATTATTTATCTAAAGCCAACATAATATTCTAAAAAAAACTTGAAATAAT
AATATCTGGAGGTGTTTAAA

Downstream 100 bases:

>100_bases
GATGAAGAGACTTGTAATATTAATTTTGGTGGGTGCCATTTTACTCACAGGATGCTGGGATAAAAGAGAAATAAATCAAT
TGGCCTTTGTACAAGGTTTA

Product: spore germination protein GerA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 511; Mature: 510

Protein sequence:

>511_residues
MPHKLPDPQYVKENYQYMTLSKKLEENIYIFQVLLKGNNDIVFRQISIGDKKVKAFLVYVDGMVDKLLITRNILEPIMIE
TRKLNKIIYTNDQLFNYINEYFITTSEVNVKDKIGDIIDDLLSGETILLIDGVEKALIISTKGWEGRNITESTTESYVRG
PKESFVETLRINTSMLRRRIKHPDFVIENIKIGKYSKTDVSIAYVKSIADDTVVQEVKKRLKKVQIDGVIDSGYLEEFIE
DNPFSPFPQIAHSEKPDKVTAEILEGKVAILVDGSPFVLIVPAVFVQFFQAAEDYYERYFLSSALRILRIAAMFIALLFP
SIYIAETTFHQEMIPTQLAISIAAQREGVPFPALLEALFMEITFEILREAGIRLPMQVGQAVSIVGGLVVGQAAVQAGLV
SPAMVIVVAMTGIASFSIPAYNVAITFRLLRFIIMIAAGTLGFFGIIMVVMMILAHMASLESFGVPYLSPLTPSRTQELS
DVLIRIPWWAKILRPRTVQRKNIMRQEDTRG

Sequences:

>Translated_511_residues
MPHKLPDPQYVKENYQYMTLSKKLEENIYIFQVLLKGNNDIVFRQISIGDKKVKAFLVYVDGMVDKLLITRNILEPIMIE
TRKLNKIIYTNDQLFNYINEYFITTSEVNVKDKIGDIIDDLLSGETILLIDGVEKALIISTKGWEGRNITESTTESYVRG
PKESFVETLRINTSMLRRRIKHPDFVIENIKIGKYSKTDVSIAYVKSIADDTVVQEVKKRLKKVQIDGVIDSGYLEEFIE
DNPFSPFPQIAHSEKPDKVTAEILEGKVAILVDGSPFVLIVPAVFVQFFQAAEDYYERYFLSSALRILRIAAMFIALLFP
SIYIAETTFHQEMIPTQLAISIAAQREGVPFPALLEALFMEITFEILREAGIRLPMQVGQAVSIVGGLVVGQAAVQAGLV
SPAMVIVVAMTGIASFSIPAYNVAITFRLLRFIIMIAAGTLGFFGIIMVVMMILAHMASLESFGVPYLSPLTPSRTQELS
DVLIRIPWWAKILRPRTVQRKNIMRQEDTRG
>Mature_510_residues
PHKLPDPQYVKENYQYMTLSKKLEENIYIFQVLLKGNNDIVFRQISIGDKKVKAFLVYVDGMVDKLLITRNILEPIMIET
RKLNKIIYTNDQLFNYINEYFITTSEVNVKDKIGDIIDDLLSGETILLIDGVEKALIISTKGWEGRNITESTTESYVRGP
KESFVETLRINTSMLRRRIKHPDFVIENIKIGKYSKTDVSIAYVKSIADDTVVQEVKKRLKKVQIDGVIDSGYLEEFIED
NPFSPFPQIAHSEKPDKVTAEILEGKVAILVDGSPFVLIVPAVFVQFFQAAEDYYERYFLSSALRILRIAAMFIALLFPS
IYIAETTFHQEMIPTQLAISIAAQREGVPFPALLEALFMEITFEILREAGIRLPMQVGQAVSIVGGLVVGQAAVQAGLVS
PAMVIVVAMTGIASFSIPAYNVAITFRLLRFIIMIAAGTLGFFGIIMVVMMILAHMASLESFGVPYLSPLTPSRTQELSD
VLIRIPWWAKILRPRTVQRKNIMRQEDTRG

Specific function: Involved in the germination response to the combination of glucose, fructose, L-asparagine, and KCl [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerABKA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004995 [H]

Pfam domain/function: PF03323 GerA [H]

EC number: NA

Molecular weight: Translated: 57664; Mature: 57532

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHKLPDPQYVKENYQYMTLSKKLEENIYIFQVLLKGNNDIVFRQISIGDKKVKAFLVYV
CCCCCCCHHHHHCCCCEEEHHHHHHCCEEEEEEEEECCCCEEEEEECCCCHHHEEEEEEH
DGMVDKLLITRNILEPIMIETRKLNKIIYTNDQLFNYINEYFITTSEVNVKDKIGDIIDD
HHHHHHHHHHHHHHHHHHHHHHHHCEEEEECHHHHHHHHHHEEECCCCCHHHHHHHHHHH
LLSGETILLIDGVEKALIISTKGWEGRNITESTTESYVRGPKESFVETLRINTSMLRRRI
HHCCCEEEEEECCCEEEEEEECCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCHHHHHHHH
KHPDFVIENIKIGKYSKTDVSIAYVKSIADDTVVQEVKKRLKKVQIDGVIDSGYLEEFIE
CCCCEEEECEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCEECHHHHHHHHC
DNPFSPFPQIAHSEKPDKVTAEILEGKVAILVDGSPFVLIVPAVFVQFFQAAEDYYERYF
CCCCCCCCHHHCCCCCCHHHHHHHCCCEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHH
LSSALRILRIAAMFIALLFPSIYIAETTFHQEMIPTQLAISIAAQREGVPFPALLEALFM
HHHHHHHHHHHHHHHHHHCCHHHEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
EITFEILREAGIRLPMQVGQAVSIVGGLVVGQAAVQAGLVSPAMVIVVAMTGIASFSIPA
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCH
YNVAITFRLLRFIIMIAAGTLGFFGIIMVVMMILAHMASLESFGVPYLSPLTPSRTQELS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
DVLIRIPWWAKILRPRTVQRKNIMRQEDTRG
HHHEECCHHHHHHCCCHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PHKLPDPQYVKENYQYMTLSKKLEENIYIFQVLLKGNNDIVFRQISIGDKKVKAFLVYV
CCCCCCHHHHHCCCCEEEHHHHHHCCEEEEEEEEECCCCEEEEEECCCCHHHEEEEEEH
DGMVDKLLITRNILEPIMIETRKLNKIIYTNDQLFNYINEYFITTSEVNVKDKIGDIIDD
HHHHHHHHHHHHHHHHHHHHHHHHCEEEEECHHHHHHHHHHEEECCCCCHHHHHHHHHHH
LLSGETILLIDGVEKALIISTKGWEGRNITESTTESYVRGPKESFVETLRINTSMLRRRI
HHCCCEEEEEECCCEEEEEEECCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCHHHHHHHH
KHPDFVIENIKIGKYSKTDVSIAYVKSIADDTVVQEVKKRLKKVQIDGVIDSGYLEEFIE
CCCCEEEECEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCEECHHHHHHHHC
DNPFSPFPQIAHSEKPDKVTAEILEGKVAILVDGSPFVLIVPAVFVQFFQAAEDYYERYF
CCCCCCCCHHHCCCCCCHHHHHHHCCCEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHH
LSSALRILRIAAMFIALLFPSIYIAETTFHQEMIPTQLAISIAAQREGVPFPALLEALFM
HHHHHHHHHHHHHHHHHHCCHHHEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
EITFEILREAGIRLPMQVGQAVSIVGGLVVGQAAVQAGLVSPAMVIVVAMTGIASFSIPA
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCH
YNVAITFRLLRFIIMIAAGTLGFFGIIMVVMMILAHMASLESFGVPYLSPLTPSRTQELS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
DVLIRIPWWAKILRPRTVQRKNIMRQEDTRG
HHHEECCHHHHHHCCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]