| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is phoP [H]
Identifier: 167039421
GI number: 167039421
Start: 792867
End: 793562
Strand: Direct
Name: phoP [H]
Synonym: Teth514_0766
Alternate gene names: 167039421
Gene position: 792867-793562 (Clockwise)
Preceding gene: 167039416
Following gene: 167039422
Centisome position: 32.27
GC content: 33.05
Gene sequence:
>696_bases ATGGGTAAAAAGATATTTGTTGTTGATGACGAAATAAAAATACTGGAAGTTGTAAAGTCATATCTTGAACATGAGGGATT TAGCGTTATTACCGAAACCAATGGCAATAACGTTTTAGATACATTCAAAAAAGAAAAACCAGACCTTGTTATATTGGACC TCATGTTGCCAGGTATTTCAGGAGAGGAACTGTGTAAAAGGTTACGTCAGTTTTCCAATGTTCCGATATTGATGCTTACA GCAAAAGTTCAAGAAAGTGATAAAATTAATGGATTTTCTATAGGTGCTGATGACTATATTACAAAACCATTCAGCCCACG CGAATTGGTTATGAGAGTAAAAGCAATATTAAGAAGAACAACTGATGATGTGCCTCTTGCTGAAGTAATGTCTTTTAATA ATGATGACCTTGTGGTTGATTTAAGAGCACATACAGTGAGGAAAAAGGGTGTGGTTGTAAATCTTACTCCAAATGAATTT AAAATTTTAAAGATTCTAATTCGCAATCCAAATAGGGTCTTTACAAGAGAAGAATTAATTGAAAAAGTTATGGGATTTGA CTATGAAGGCTATGACAGGACGATTGATGCACATATTAAAAATTTAAGACAAAAAATTGAAGACGATACGAAAAATCCAG TGTATATTAAAACGGTGTATGGCGTTGGATATAAATTTGGTGATGGAAATGTTTAG
Upstream 100 bases:
>100_bases CATAAGCCGTGATGTATAATATATGAAGAAAGAAATTTATCAAGCTATTTTCATACATTATTCATAATTTTACAATAAAA TGATAAAGGATGGTTGAAAA
Downstream 100 bases:
>100_bases AAATAATTTAAGAACAAGGACGGCTATTGTATTTATTTCAATAGCTCTTATATCGATTGTTATTGTAAGTATTACAACAA ACATCTTAATAATAAATAGC
Product: two component transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MGKKIFVVDDEIKILEVVKSYLEHEGFSVITETNGNNVLDTFKKEKPDLVILDLMLPGISGEELCKRLRQFSNVPILMLT AKVQESDKINGFSIGADDYITKPFSPRELVMRVKAILRRTTDDVPLAEVMSFNNDDLVVDLRAHTVRKKGVVVNLTPNEF KILKILIRNPNRVFTREELIEKVMGFDYEGYDRTIDAHIKNLRQKIEDDTKNPVYIKTVYGVGYKFGDGNV
Sequences:
>Translated_231_residues MGKKIFVVDDEIKILEVVKSYLEHEGFSVITETNGNNVLDTFKKEKPDLVILDLMLPGISGEELCKRLRQFSNVPILMLT AKVQESDKINGFSIGADDYITKPFSPRELVMRVKAILRRTTDDVPLAEVMSFNNDDLVVDLRAHTVRKKGVVVNLTPNEF KILKILIRNPNRVFTREELIEKVMGFDYEGYDRTIDAHIKNLRQKIEDDTKNPVYIKTVYGVGYKFGDGNV >Mature_230_residues GKKIFVVDDEIKILEVVKSYLEHEGFSVITETNGNNVLDTFKKEKPDLVILDLMLPGISGEELCKRLRQFSNVPILMLTA KVQESDKINGFSIGADDYITKPFSPRELVMRVKAILRRTTDDVPLAEVMSFNNDDLVVDLRAHTVRKKGVVVNLTPNEFK ILKILIRNPNRVFTREELIEKVMGFDYEGYDRTIDAHIKNLRQKIEDDTKNPVYIKTVYGVGYKFGDGNV
Specific function: Member of the two-component regulatory system phoP/phoR involved in the regulation of alkaline phosphatase genes phoA and phoB and of phosphodiesterase [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788394, Length=228, Percent_Identity=42.5438596491228, Blast_Score=192, Evalue=2e-50, Organism=Escherichia coli, GI1789809, Length=229, Percent_Identity=40.174672489083, Blast_Score=177, Evalue=5e-46, Organism=Escherichia coli, GI1786599, Length=229, Percent_Identity=38.8646288209607, Blast_Score=171, Evalue=3e-44, Organism=Escherichia coli, GI1790860, Length=223, Percent_Identity=38.5650224215247, Blast_Score=153, Evalue=8e-39, Organism=Escherichia coli, GI1786911, Length=223, Percent_Identity=36.7713004484305, Blast_Score=149, Evalue=2e-37, Organism=Escherichia coli, GI1790863, Length=228, Percent_Identity=35.5263157894737, Blast_Score=145, Evalue=2e-36, Organism=Escherichia coli, GI2367329, Length=230, Percent_Identity=38.2608695652174, Blast_Score=135, Evalue=3e-33, Organism=Escherichia coli, GI1789402, Length=226, Percent_Identity=31.4159292035398, Blast_Score=130, Evalue=6e-32, Organism=Escherichia coli, GI1786784, Length=222, Percent_Identity=35.5855855855856, Blast_Score=129, Evalue=1e-31, Organism=Escherichia coli, GI87082012, Length=223, Percent_Identity=30.0448430493274, Blast_Score=120, Evalue=7e-29, Organism=Escherichia coli, GI1787229, Length=228, Percent_Identity=31.5789473684211, Blast_Score=118, Evalue=3e-28, Organism=Escherichia coli, GI145693140, Length=231, Percent_Identity=29.4372294372294, Blast_Score=113, Evalue=1e-26, Organism=Escherichia coli, GI1790552, Length=222, Percent_Identity=32.4324324324324, Blast_Score=107, Evalue=8e-25, Organism=Escherichia coli, GI1787375, Length=224, Percent_Identity=31.6964285714286, Blast_Score=97, Evalue=7e-22, Organism=Escherichia coli, GI1790299, Length=111, Percent_Identity=31.5315315315315, Blast_Score=67, Evalue=8e-13, Organism=Escherichia coli, GI1788550, Length=116, Percent_Identity=28.448275862069, Blast_Score=64, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR016032 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 26410; Mature: 26279
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKKIFVVDDEIKILEVVKSYLEHEGFSVITETNGNNVLDTFKKEKPDLVILDLMLPGIS CCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCEEEEEEECCCCC GEELCKRLRQFSNVPILMLTAKVQESDKINGFSIGADDYITKPFSPRELVMRVKAILRRT HHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHC TDDVPLAEVMSFNNDDLVVDLRAHTVRKKGVVVNLTPNEFKILKILIRNPNRVFTREELI CCCCCHHHHHCCCCCCEEEEEHHHHHHHCCEEEEECCCCEEEEEEEECCCCCCCCHHHHH EKVMGFDYEGYDRTIDAHIKNLRQKIEDDTKNPVYIKTVYGVGYKFGDGNV HHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCEEECCCCC >Mature Secondary Structure GKKIFVVDDEIKILEVVKSYLEHEGFSVITETNGNNVLDTFKKEKPDLVILDLMLPGIS CCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCEEEEEEECCCCC GEELCKRLRQFSNVPILMLTAKVQESDKINGFSIGADDYITKPFSPRELVMRVKAILRRT HHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHC TDDVPLAEVMSFNNDDLVVDLRAHTVRKKGVVVNLTPNEFKILKILIRNPNRVFTREELI CCCCCHHHHHCCCCCCEEEEEHHHHHHHCCEEEEECCCCEEEEEEEECCCCCCCCHHHHH EKVMGFDYEGYDRTIDAHIKNLRQKIEDDTKNPVYIKTVYGVGYKFGDGNV HHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1454550; 3036763; 9387221; 9384377; 8045898; 3142862 [H]