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The map label for this gene is insF1 [H]

Identifier: 167039416

GI number: 167039416

Start: 790949

End: 791458

Strand: Direct

Name: insF1 [H]

Synonym: Teth514_0761

Alternate gene names: 167039416

Gene position: 790949-791458 (Clockwise)

Preceding gene: 167039415

Following gene: 167039421

Centisome position: 32.19

GC content: 33.73

Gene sequence:

>510_bases
ATGTGTGAAGTTTTAAAGGTTTTAAGGAGCTCCTATATAACGCATATTTACACTGTCAAGGACAAATGGTGTTACCTTGC
CACAGTAATAGATCTTTATACCAAGAAAGTCATTGGCTATGCGTTTTCTAAAACGATGGATACAGAGCTTGCTATTCGTG
CTGTAGAAAATGCCTATAATGCTCAAAAGCCACAGGGAAAGCTTATACTCCATAGTGATTTAGGTTCACAGTATACAAGC
ACCAAATTTCAAGAATATATATTATCCAAAGGTAACATAAAACACTCATTTAGTCACAAAGGATGCCCTTATGATAATGC
ATGTATAGAATCTTTTCATGCTTCTTTAAAAAAGGAAGAAGTAAATTTAGCTACTTACTATGATTTTGATACTGCCAGAC
TTGCTATATTCGAGTATATTGAATCCTGGTATAATAGAAAGAGACTACATAGTAGTATAGGGTATATGACTCCGCAACAA
TTTGAGGTTTTGATTAAAAAGTCAGCATAA

Upstream 100 bases:

>100_bases
AGAATGAAATATTAAAAAAAGCCATGGCCATATTCGAAAAGGAGTAAGCTCTATATTTGAGTTTATTGAGGAAAATAAAA
AATATTATGATGTTAAATAA

Downstream 100 bases:

>100_bases
AAATTTCGAGTTTTTGTGTCTACTATATTGACATAAATCCACATAAATCCAATTCCGCCAAGCAAGTTTTACAAAGAAAT
TTTACGAAACAATGCGAGCC

Product: integrase catalytic subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MCEVLKVLRSSYITHIYTVKDKWCYLATVIDLYTKKVIGYAFSKTMDTELAIRAVENAYNAQKPQGKLILHSDLGSQYTS
TKFQEYILSKGNIKHSFSHKGCPYDNACIESFHASLKKEEVNLATYYDFDTARLAIFEYIESWYNRKRLHSSIGYMTPQQ
FEVLIKKSA

Sequences:

>Translated_169_residues
MCEVLKVLRSSYITHIYTVKDKWCYLATVIDLYTKKVIGYAFSKTMDTELAIRAVENAYNAQKPQGKLILHSDLGSQYTS
TKFQEYILSKGNIKHSFSHKGCPYDNACIESFHASLKKEEVNLATYYDFDTARLAIFEYIESWYNRKRLHSSIGYMTPQQ
FEVLIKKSA
>Mature_169_residues
MCEVLKVLRSSYITHIYTVKDKWCYLATVIDLYTKKVIGYAFSKTMDTELAIRAVENAYNAQKPQGKLILHSDLGSQYTS
TKFQEYILSKGNIKHSFSHKGCPYDNACIESFHASLKKEEVNLATYYDFDTARLAIFEYIESWYNRKRLHSSIGYMTPQQ
FEVLIKKSA

Specific function: Involved in the transposition of the insertion sequence IS3 [H]

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=120, Percent_Identity=32.5, Blast_Score=66, Evalue=2e-11,
Organism=Escherichia coli, GI1788405, Length=150, Percent_Identity=42.6666666666667, Blast_Score=120, Evalue=4e-29,
Organism=Escherichia coli, GI1787263, Length=150, Percent_Identity=42.6666666666667, Blast_Score=120, Evalue=4e-29,
Organism=Escherichia coli, GI1786753, Length=150, Percent_Identity=42.6666666666667, Blast_Score=120, Evalue=4e-29,
Organism=Escherichia coli, GI1786570, Length=150, Percent_Identity=42.6666666666667, Blast_Score=120, Evalue=4e-29,
Organism=Escherichia coli, GI1786490, Length=150, Percent_Identity=42.6666666666667, Blast_Score=120, Evalue=4e-29,
Organism=Escherichia coli, GI1789981, Length=145, Percent_Identity=33.1034482758621, Blast_Score=82, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 19598; Mature: 19598

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCEVLKVLRSSYITHIYTVKDKWCYLATVIDLYTKKVIGYAFSKTMDTELAIRAVENAYN
CHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC
AQKPQGKLILHSDLGSQYTSTKFQEYILSKGNIKHSFSHKGCPYDNACIESFHASLKKEE
CCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
VNLATYYDFDTARLAIFEYIESWYNRKRLHSSIGYMTPQQFEVLIKKSA
CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MCEVLKVLRSSYITHIYTVKDKWCYLATVIDLYTKKVIGYAFSKTMDTELAIRAVENAYN
CHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC
AQKPQGKLILHSDLGSQYTSTKFQEYILSKGNIKHSFSHKGCPYDNACIESFHASLKKEE
CCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
VNLATYYDFDTARLAIFEYIESWYNRKRLHSSIGYMTPQQFEVLIKKSA
CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2987844; 9278503 [H]