| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is 167039381
Identifier: 167039381
GI number: 167039381
Start: 748352
End: 749257
Strand: Direct
Name: 167039381
Synonym: Teth514_0723
Alternate gene names: NA
Gene position: 748352-749257 (Clockwise)
Preceding gene: 167039380
Following gene: 167039382
Centisome position: 30.45
GC content: 32.89
Gene sequence:
>906_bases GTGGCAGTCTCTTTTTTATTCGGCGCAGCTGTTTTTATGGTGGTAGTTCTTTTGTACAGTATTAGGGAAAATAAAAGGCT CAAACTTAAAAGAAGGCTGGAGAGGCATTTAGTGATATCACAAAAGAATGAGTTTAGTATAGTGGATTTATTTGGTTTAG GAAGCTTTATTGAGAAGTTAGAGAAAAAGCTTAAAAAAAGCGGTATTAAGGTAGATGCAGAGGAAGTGTTTTTGTGGTTT ATACTTTTTACTATTGTGATACTTGTATTTTTGAGCTTTAAAGGTTTTACTTTATTAGGTTTTACACTTCCTGTTATGCT TTATTATCTTATAGACTATATTTTAGACTATTTAGGGAGAAGAAAAATAAGAAAAACTGAAGAGCAGTTTAGAGATTTTG TTAAAATGCTAGGAGCATATCTTAAAATGGTACCAAGCTTTGCTGGAGCTTTTATAAAGGCAGCTGAGGAAGCTGAAAAT CCTTTAAAAGAGCACACAGACAGAGTTCTAAGGAGATTTCAGTTAGGAGAAGATTTAGAAGAAGCATTAAAAGAATTTAA AAATATAGAAAGCACATATATAAAAGTATGGATTGACAGCATTATTTTTGCAGTGAGGATGAAATCTGATTTATCGAGAG TGTGTGAGAGGACAGCTAAAAAACTTTATGAGAGAATAAAAATGTCAAACAGAATTGCTGCCATGACTGTGCAGGCAAAA TCTTTAATGGTTTCTCTGGTAGGCATTATGGCTTTTATGATTGTTTCAACAGTGTCAGTTAGCCCTGATTTTATCAGGAC TTTTTCTTCTCCTATAGGGAAATTAGTAATTGCTTATGCTGCTTTGAGCTACTTTATATCAACACTTTATATTCTAAAAA GAATAGACAGGGAGATGGAACTATGA
Upstream 100 bases:
>100_bases AAAGGAAATTTAAAAGGCAGAGAGCTTGCTGAAGTTATTGAAATTGAGGGCATAGATGAAAACGGAGACTACATTTTAAA GCATGTGGTAGGTGATTAAT
Downstream 100 bases:
>100_bases GAAAGATTGTTTCAGAAAAACACCTTCAAAAACTTGGAATAAGACAGGACATGATAGAAAAGTGGGATAAGGAAATTAAA GCAGTCGGAGGAGTGAAAAT
Product: type II secretion system protein
Products: NA
Alternate protein names: Bacterial Type II Secretion System Protein F Domain; Type II Secretion System F Domain; Bacterial Type II Secretion System Protein F Domain Protein
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MAVSFLFGAAVFMVVVLLYSIRENKRLKLKRRLERHLVISQKNEFSIVDLFGLGSFIEKLEKKLKKSGIKVDAEEVFLWF ILFTIVILVFLSFKGFTLLGFTLPVMLYYLIDYILDYLGRRKIRKTEEQFRDFVKMLGAYLKMVPSFAGAFIKAAEEAEN PLKEHTDRVLRRFQLGEDLEEALKEFKNIESTYIKVWIDSIIFAVRMKSDLSRVCERTAKKLYERIKMSNRIAAMTVQAK SLMVSLVGIMAFMIVSTVSVSPDFIRTFSSPIGKLVIAYAALSYFISTLYILKRIDREMEL
Sequences:
>Translated_301_residues MAVSFLFGAAVFMVVVLLYSIRENKRLKLKRRLERHLVISQKNEFSIVDLFGLGSFIEKLEKKLKKSGIKVDAEEVFLWF ILFTIVILVFLSFKGFTLLGFTLPVMLYYLIDYILDYLGRRKIRKTEEQFRDFVKMLGAYLKMVPSFAGAFIKAAEEAEN PLKEHTDRVLRRFQLGEDLEEALKEFKNIESTYIKVWIDSIIFAVRMKSDLSRVCERTAKKLYERIKMSNRIAAMTVQAK SLMVSLVGIMAFMIVSTVSVSPDFIRTFSSPIGKLVIAYAALSYFISTLYILKRIDREMEL >Mature_300_residues AVSFLFGAAVFMVVVLLYSIRENKRLKLKRRLERHLVISQKNEFSIVDLFGLGSFIEKLEKKLKKSGIKVDAEEVFLWFI LFTIVILVFLSFKGFTLLGFTLPVMLYYLIDYILDYLGRRKIRKTEEQFRDFVKMLGAYLKMVPSFAGAFIKAAEEAENP LKEHTDRVLRRFQLGEDLEEALKEFKNIESTYIKVWIDSIIFAVRMKSDLSRVCERTAKKLYERIKMSNRIAAMTVQAKS LMVSLVGIMAFMIVSTVSVSPDFIRTFSSPIGKLVIAYAALSYFISTLYILKRIDREMEL
Specific function: Unknown
COG id: COG4965
COG function: function code U; Flp pilus assembly protein TadB
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34897; Mature: 34766
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVSFLFGAAVFMVVVLLYSIRENKRLKLKRRLERHLVISQKNEFSIVDLFGLGSFIEKL CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH EKKLKKSGIKVDAEEVFLWFILFTIVILVFLSFKGFTLLGFTLPVMLYYLIDYILDYLGR HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH RKIRKTEEQFRDFVKMLGAYLKMVPSFAGAFIKAAEEAENPLKEHTDRVLRRFQLGEDLE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHH EALKEFKNIESTYIKVWIDSIIFAVRMKSDLSRVCERTAKKLYERIKMSNRIAAMTVQAK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH SLMVSLVGIMAFMIVSTVSVSPDFIRTFSSPIGKLVIAYAALSYFISTLYILKRIDREME HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC L C >Mature Secondary Structure AVSFLFGAAVFMVVVLLYSIRENKRLKLKRRLERHLVISQKNEFSIVDLFGLGSFIEKL CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH EKKLKKSGIKVDAEEVFLWFILFTIVILVFLSFKGFTLLGFTLPVMLYYLIDYILDYLGR HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH RKIRKTEEQFRDFVKMLGAYLKMVPSFAGAFIKAAEEAENPLKEHTDRVLRRFQLGEDLE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHH EALKEFKNIESTYIKVWIDSIIFAVRMKSDLSRVCERTAKKLYERIKMSNRIAAMTVQAK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH SLMVSLVGIMAFMIVSTVSVSPDFIRTFSSPIGKLVIAYAALSYFISTLYILKRIDREME HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC L C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA