| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is gpmA [H]
Identifier: 167039326
GI number: 167039326
Start: 701208
End: 701963
Strand: Direct
Name: gpmA [H]
Synonym: Teth514_0667
Alternate gene names: 167039326
Gene position: 701208-701963 (Clockwise)
Preceding gene: 167039324
Following gene: 167039327
Centisome position: 28.54
GC content: 38.62
Gene sequence:
>756_bases ATGCATAAAGTTGTTTTGCTAAGACATGGAGAAAGCCTGTGGAATATGGAAAACAGATTTACTGGCTGGACGGATGTTGA TTTATCTCCAAAGGGCATTGAAGAAGCTCGGGAAAGCGGCAAGACTTTAAAGGCAGAAGGGTACACTTTTGACTGTGCTT TTACTTCTGTTTTAAAAAGAGCTATAAGAACTTTGTGGATTGTTCTTGACGAATTAGACAGGATGTGGATACCGGTTTAT AAATCATGGAGGCTCAATGAAAGGCATTATGGAGCACTGCAAGGGCTTAATAAAGCTGAGACCGCCAAGAAATACGGAGA AGAGCAGGTAAAAATATGGAGAAGATCTGCTGATGTAAGGCCTCCCGCCTTAGAAAAAGATGACCCGAGATATCCCGGTT TTGACCCCAGATATGCTGACCTTTCTGAGGAAGAAATCCCCCTTACTGAAAATTTGATTGATACAATTAACAGAGTTATT CCATATTGGGAGTCCACAATTGCACCGACTATAAAATCAGGTAAAAAAGTGCTAATAGTTGCTCATGGAAATAGTTTGAG AGGGCTTGTAAAATACCTTGACAATCTTTCTAAGCAGGAGATAATGGAGTTAAATATTCCTACAGGAATTCCGTTAGTTT ATGAGCTTGACGATGATTTAAAACCTATAAGGCATTATTATCTTGCCGATGAAGAGAAAGTAAAAGAGAAGAAAGAATTA GTAGAAAACCAAGGAAAGATTCAAGGGAATTCTTAA
Upstream 100 bases:
>100_bases ATACTGTTGTAATTGCTTGATAATTGAGATATAATTAAGAAAACAGGATAGAGTGGGAAAAGACAGAAAATGTTTGTAAA TATGAAAGGTGGGGATATGT
Downstream 100 bases:
>100_bases AATATTATCTTGTCTTATTTTTACTTGTTTTTTGGCTTCTAAAAGTGTACAATAGAAATATAAGGAATATAGAATGAGAG GTGTATTTTGTATGTTGAGT
Product: phosphoglyceromutase
Products: NA
Alternate protein names: BPG-dependent PGAM; PGAM; Phosphoglyceromutase; dPGM [H]
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MHKVVLLRHGESLWNMENRFTGWTDVDLSPKGIEEARESGKTLKAEGYTFDCAFTSVLKRAIRTLWIVLDELDRMWIPVY KSWRLNERHYGALQGLNKAETAKKYGEEQVKIWRRSADVRPPALEKDDPRYPGFDPRYADLSEEEIPLTENLIDTINRVI PYWESTIAPTIKSGKKVLIVAHGNSLRGLVKYLDNLSKQEIMELNIPTGIPLVYELDDDLKPIRHYYLADEEKVKEKKEL VENQGKIQGNS
Sequences:
>Translated_251_residues MHKVVLLRHGESLWNMENRFTGWTDVDLSPKGIEEARESGKTLKAEGYTFDCAFTSVLKRAIRTLWIVLDELDRMWIPVY KSWRLNERHYGALQGLNKAETAKKYGEEQVKIWRRSADVRPPALEKDDPRYPGFDPRYADLSEEEIPLTENLIDTINRVI PYWESTIAPTIKSGKKVLIVAHGNSLRGLVKYLDNLSKQEIMELNIPTGIPLVYELDDDLKPIRHYYLADEEKVKEKKEL VENQGKIQGNS >Mature_251_residues MHKVVLLRHGESLWNMENRFTGWTDVDLSPKGIEEARESGKTLKAEGYTFDCAFTSVLKRAIRTLWIVLDELDRMWIPVY KSWRLNERHYGALQGLNKAETAKKYGEEQVKIWRRSADVRPPALEKDDPRYPGFDPRYADLSEEEIPLTENLIDTINRVI PYWESTIAPTIKSGKKVLIVAHGNSLRGLVKYLDNLSKQEIMELNIPTGIPLVYELDDDLKPIRHYYLADEEKVKEKKEL VENQGKIQGNS
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]
COG id: COG0588
COG function: function code G; Phosphoglycerate mutase 1
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily [H]
Homologues:
Organism=Homo sapiens, GI4505753, Length=250, Percent_Identity=62, Blast_Score=310, Evalue=8e-85, Organism=Homo sapiens, GI50593010, Length=250, Percent_Identity=57.6, Blast_Score=302, Evalue=2e-82, Organism=Homo sapiens, GI71274132, Length=248, Percent_Identity=59.6774193548387, Blast_Score=292, Evalue=2e-79, Organism=Homo sapiens, GI4502445, Length=252, Percent_Identity=47.6190476190476, Blast_Score=257, Evalue=6e-69, Organism=Homo sapiens, GI40353764, Length=252, Percent_Identity=47.6190476190476, Blast_Score=257, Evalue=6e-69, Organism=Homo sapiens, GI310129614, Length=162, Percent_Identity=63.5802469135803, Blast_Score=206, Evalue=1e-53, Organism=Escherichia coli, GI1786970, Length=246, Percent_Identity=68.6991869918699, Blast_Score=355, Evalue=2e-99, Organism=Saccharomyces cerevisiae, GI6322697, Length=246, Percent_Identity=52.4390243902439, Blast_Score=251, Evalue=1e-67, Organism=Saccharomyces cerevisiae, GI6324516, Length=292, Percent_Identity=32.5342465753425, Blast_Score=143, Evalue=3e-35, Organism=Saccharomyces cerevisiae, GI6320183, Length=300, Percent_Identity=32.6666666666667, Blast_Score=132, Evalue=4e-32, Organism=Drosophila melanogaster, GI24646216, Length=251, Percent_Identity=55.7768924302789, Blast_Score=270, Evalue=9e-73, Organism=Drosophila melanogaster, GI85725270, Length=249, Percent_Identity=56.2248995983936, Blast_Score=260, Evalue=6e-70, Organism=Drosophila melanogaster, GI85725272, Length=249, Percent_Identity=56.2248995983936, Blast_Score=260, Evalue=6e-70, Organism=Drosophila melanogaster, GI24650981, Length=249, Percent_Identity=56.2248995983936, Blast_Score=260, Evalue=6e-70, Organism=Drosophila melanogaster, GI28571817, Length=219, Percent_Identity=37.8995433789954, Blast_Score=166, Evalue=2e-41, Organism=Drosophila melanogaster, GI28571815, Length=219, Percent_Identity=37.8995433789954, Blast_Score=166, Evalue=2e-41, Organism=Drosophila melanogaster, GI24648979, Length=219, Percent_Identity=37.8995433789954, Blast_Score=165, Evalue=2e-41,
Paralogues:
None
Copy number: 960 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 - InterPro: IPR001345 - InterPro: IPR005952 [H]
Pfam domain/function: PF00300 PGAM [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 29070; Mature: 29070
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: PS00175 PG_MUTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKVVLLRHGESLWNMENRFTGWTDVDLSPKGIEEARESGKTLKAEGYTFDCAFTSVLKR CCEEEEEECCCHHHCHHHCCCCCCCCCCCCCHHHHHHHCCCEEEECCEEEHHHHHHHHHH AIRTLWIVLDELDRMWIPVYKSWRLNERHYGALQGLNKAETAKKYGEEQVKIWRRSADVR HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHCHHHHHHHHHHCCCC PPALEKDDPRYPGFDPRYADLSEEEIPLTENLIDTINRVIPYWESTIAPTIKSGKKVLIV CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHCCCEEEEE AHGNSLRGLVKYLDNLSKQEIMELNIPTGIPLVYELDDDLKPIRHYYLADEEKVKEKKEL ECCCHHHHHHHHHHCCCHHHHEEECCCCCCCEEEECCCCHHHHHHHHCCCHHHHHHHHHH VENQGKIQGNS HHHCCCCCCCC >Mature Secondary Structure MHKVVLLRHGESLWNMENRFTGWTDVDLSPKGIEEARESGKTLKAEGYTFDCAFTSVLKR CCEEEEEECCCHHHCHHHCCCCCCCCCCCCCHHHHHHHCCCEEEECCEEEHHHHHHHHHH AIRTLWIVLDELDRMWIPVYKSWRLNERHYGALQGLNKAETAKKYGEEQVKIWRRSADVR HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHCHHHHHHHHHHCCCC PPALEKDDPRYPGFDPRYADLSEEEIPLTENLIDTINRVIPYWESTIAPTIKSGKKVLIV CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHCCCEEEEE AHGNSLRGLVKYLDNLSKQEIMELNIPTGIPLVYELDDDLKPIRHYYLADEEKVKEKKEL ECCCHHHHHHHHHHCCCHHHHEEECCCCCCCEEEECCCCHHHHHHHHCCCHHHHHHHHHH VENQGKIQGNS HHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA