| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is 167039292
Identifier: 167039292
GI number: 167039292
Start: 660960
End: 661598
Strand: Direct
Name: 167039292
Synonym: Teth514_0633
Alternate gene names: NA
Gene position: 660960-661598 (Clockwise)
Preceding gene: 167039291
Following gene: 167039293
Centisome position: 26.9
GC content: 36.46
Gene sequence:
>639_bases ATGTCCTACCTTTTAAGTATTTTTTCTGATTTTGCTCAAATAAAACCAGTGACTTTATCGGTTATATTAGCAATTTTATT GGCAGCTTTTCTTTTATATCTGATGCGAAAAAGTGTCAAATTTGACACAAAAATGCTTGTCTACGGAGCACTTTCAATCG CTATTTCTTTCGTGCTGTCTTATATAAGATTTTATCACTGGCCTCAAGGTGGTTCTATTACACCTGCCAGCATGTTGCCG CTTTTTATCTTTGCCTATTATTATGGACCAGGTCCTGGTGTGATTGTAGGAATGGCGTATGGATTTTTACAACTTATTCA AGACCCATTTATTGTCCAATGGGTGCAAGTACTTCTCGACTATCCTTTGGCCTTCGGTGCTTTAGGACTTGCTGGCTTTT TTAGAAAAAACCTAAGTTTGGGAATTTTAGTCGGTGGATTTGGACGATTTTTCTCTCACTTTTTATCGGGAGTGTTCTTT TTTGCAAGCTATGCACCAGAAGGAATGAGCCCTATAGTTTATTCACTTTTAGTCAATGGAAGCATAATAGGTGTAGAAGT GGCAATATGTTTTGCGGTTTCACTAATTCCTCAAGTTAGAAATGCTATTGAAGAAATTAAAAAGAAAGCAATTGCTTAA
Upstream 100 bases:
>100_bases GGGTAATGCCTCCGTAGGGAATGCGGCTCAAAAATACCGCATTTCGCGGTATTTTTTTCAGCGAACATAGCCTCCTTGAA AAATGGAGGTGTTTTTGTTT
Downstream 100 bases:
>100_bases AGGGGTATTTCCCCTTTTTATTTTTTGCAGTGGATAGCTGAAATAATGGTATAATATATGGTATAATATTATGTAAGAAA AAATTTAACGCAGAATTAAC
Product: putative proton-coupled thiamine transporter YuaJ
Products: NA
Alternate protein names: Proton-Coupled Thiamine Transporter Yuaj
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MSYLLSIFSDFAQIKPVTLSVILAILLAAFLLYLMRKSVKFDTKMLVYGALSIAISFVLSYIRFYHWPQGGSITPASMLP LFIFAYYYGPGPGVIVGMAYGFLQLIQDPFIVQWVQVLLDYPLAFGALGLAGFFRKNLSLGILVGGFGRFFSHFLSGVFF FASYAPEGMSPIVYSLLVNGSIIGVEVAICFAVSLIPQVRNAIEEIKKKAIA
Sequences:
>Translated_212_residues MSYLLSIFSDFAQIKPVTLSVILAILLAAFLLYLMRKSVKFDTKMLVYGALSIAISFVLSYIRFYHWPQGGSITPASMLP LFIFAYYYGPGPGVIVGMAYGFLQLIQDPFIVQWVQVLLDYPLAFGALGLAGFFRKNLSLGILVGGFGRFFSHFLSGVFF FASYAPEGMSPIVYSLLVNGSIIGVEVAICFAVSLIPQVRNAIEEIKKKAIA >Mature_211_residues SYLLSIFSDFAQIKPVTLSVILAILLAAFLLYLMRKSVKFDTKMLVYGALSIAISFVLSYIRFYHWPQGGSITPASMLPL FIFAYYYGPGPGVIVGMAYGFLQLIQDPFIVQWVQVLLDYPLAFGALGLAGFFRKNLSLGILVGGFGRFFSHFLSGVFFF ASYAPEGMSPIVYSLLVNGSIIGVEVAICFAVSLIPQVRNAIEEIKKKAIA
Specific function: Unknown
COG id: COG3859
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23329; Mature: 23198
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYLLSIFSDFAQIKPVTLSVILAILLAAFLLYLMRKSVKFDTKMLVYGALSIAISFVLS CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH YIRFYHWPQGGSITPASMLPLFIFAYYYGPGPGVIVGMAYGFLQLIQDPFIVQWVQVLLD HHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHH YPLAFGALGLAGFFRKNLSLGILVGGFGRFFSHFLSGVFFFASYAPEGMSPIVYSLLVNG HHHHHHHHHHHHHHHHCCCHHEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC SIIGVEVAICFAVSLIPQVRNAIEEIKKKAIA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SYLLSIFSDFAQIKPVTLSVILAILLAAFLLYLMRKSVKFDTKMLVYGALSIAISFVLS HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH YIRFYHWPQGGSITPASMLPLFIFAYYYGPGPGVIVGMAYGFLQLIQDPFIVQWVQVLLD HHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHH YPLAFGALGLAGFFRKNLSLGILVGGFGRFFSHFLSGVFFFASYAPEGMSPIVYSLLVNG HHHHHHHHHHHHHHHHCCCHHEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC SIIGVEVAICFAVSLIPQVRNAIEEIKKKAIA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA