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The map label for this gene is yvyD [H]

Identifier: 167039132

GI number: 167039132

Start: 482975

End: 483520

Strand: Direct

Name: yvyD [H]

Synonym: Teth514_0471

Alternate gene names: 167039132

Gene position: 482975-483520 (Clockwise)

Preceding gene: 167039131

Following gene: 167039133

Centisome position: 19.66

GC content: 35.35

Gene sequence:

>546_bases
ATGAATATCACAGTAAGCGGTAAAAATGGCATGACAGTTACGGATGGACTAAGGGATGCGGTTATAAAAAATGTGAGCAA
GTTAAGCAAATACTTTCCAGAAGATACTGAAGTGAGGACTGTTTTAAGTGTACAGAAAAACAATCACATTGCGGAAATTA
CAATACCTTTTAAGGGTATTATATTTAGAGCTGAAGAAGTCAGCGATGACATGTATGTGTCAATTGATAGGGTTGTAGAC
AAAATAGAAAAACAAATACTCAAACACAAGGCAAAGCTTAAAAATAGATTTGGTTCTAATGAGTCAATAAGGTTTGAAAT
TCCACCTGTTTATGAAGAAGCTAAGGGAGAAGAGGAAGAGGGTTCCTTTGAAATAGTTAAGACAAAGAGGTTCCCCATAA
AGCCTATGTCACCTGAGGAAGCAATTCTTCAGATGAACCTTTTGGGACATAACTTCTTTGTATTTACAAATGCCGACACT
GACACTATAAATGTCGTATACAAAAGAAAAGATGGGAAATATGGCTTAATAGAGCCAATAGAATAA

Upstream 100 bases:

>100_bases
CACTCCAAAAGGAGTGTTTTTTGTTTCCACATATTGCAGGAATATTGTTTTTTATGTAGAATTATATTAAATAGAAGGAT
AATGAGAGGGGTTTGATACT

Downstream 100 bases:

>100_bases
AACTACATAAGAAGCTAAAAAATTGGGGATAGGCTCTATCCCCAATTTTTTTGTCTAAAAAGAAGGAATTTTAAATTTTG
TATAGAATATATTTTTAGTG

Product: sigma 54 modulation protein/ribosomal protein S30EA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MNITVSGKNGMTVTDGLRDAVIKNVSKLSKYFPEDTEVRTVLSVQKNNHIAEITIPFKGIIFRAEEVSDDMYVSIDRVVD
KIEKQILKHKAKLKNRFGSNESIRFEIPPVYEEAKGEEEEGSFEIVKTKRFPIKPMSPEEAILQMNLLGHNFFVFTNADT
DTINVVYKRKDGKYGLIEPIE

Sequences:

>Translated_181_residues
MNITVSGKNGMTVTDGLRDAVIKNVSKLSKYFPEDTEVRTVLSVQKNNHIAEITIPFKGIIFRAEEVSDDMYVSIDRVVD
KIEKQILKHKAKLKNRFGSNESIRFEIPPVYEEAKGEEEEGSFEIVKTKRFPIKPMSPEEAILQMNLLGHNFFVFTNADT
DTINVVYKRKDGKYGLIEPIE
>Mature_181_residues
MNITVSGKNGMTVTDGLRDAVIKNVSKLSKYFPEDTEVRTVLSVQKNNHIAEITIPFKGIIFRAEEVSDDMYVSIDRVVD
KIEKQILKHKAKLKNRFGSNESIRFEIPPVYEEAKGEEEEGSFEIVKTKRFPIKPMSPEEAILQMNLLGHNFFVFTNADT
DTINVVYKRKDGKYGLIEPIE

Specific function: Probably Modulates The Activity Of Sigma(54) (Rpon). [C]

COG id: COG1544

COG function: function code J; Ribosome-associated protein Y (PSrp-1)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S30Ae family [H]

Homologues:

Organism=Escherichia coli, GI1789595, Length=96, Percent_Identity=35.4166666666667, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003489 [H]

Pfam domain/function: PF02482 Ribosomal_S30AE [H]

EC number: NA

Molecular weight: Translated: 20670; Mature: 20670

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNITVSGKNGMTVTDGLRDAVIKNVSKLSKYFPEDTEVRTVLSVQKNNHIAEITIPFKGI
CEEEEECCCCCEEECHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEECCCEE
IFRAEEVSDDMYVSIDRVVDKIEKQILKHKAKLKNRFGSNESIRFEIPPVYEEAKGEEEE
EEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHCCCCCC
GSFEIVKTKRFPIKPMSPEEAILQMNLLGHNFFVFTNADTDTINVVYKRKDGKYGLIEPI
CCEEEEEECCCCCCCCCHHHHHEEEEECCCEEEEEECCCCCEEEEEEEECCCCCCCCCCC
E
C
>Mature Secondary Structure
MNITVSGKNGMTVTDGLRDAVIKNVSKLSKYFPEDTEVRTVLSVQKNNHIAEITIPFKGI
CEEEEECCCCCEEECHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEECCCEE
IFRAEEVSDDMYVSIDRVVDKIEKQILKHKAKLKNRFGSNESIRFEIPPVYEEAKGEEEE
EEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHCCCCCC
GSFEIVKTKRFPIKPMSPEEAILQMNLLGHNFFVFTNADTDTINVVYKRKDGKYGLIEPI
CCEEEEEECCCCCCCCCHHHHHEEEEECCCEEEEEECCCCCEEEEEEEECCCCCCCCCCC
E
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8195064; 9384377; 1901557 [H]