| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is artQ [H]
Identifier: 167039130
GI number: 167039130
Start: 481500
End: 482162
Strand: Direct
Name: artQ [H]
Synonym: Teth514_0469
Alternate gene names: 167039130
Gene position: 481500-482162 (Clockwise)
Preceding gene: 167039129
Following gene: 167039131
Centisome position: 19.6
GC content: 36.8
Gene sequence:
>663_bases ATGAGTGTAGATTTTTTGAGCATGGTAAAATACAGTCATTTATTTGTAAGTGGCCTTCTTATGACTTTAAAACTCACCTT TTTAGCAGTGACTATAGGAGTTATATTAGGTCTGATTGTTGCTCTTATTAAAATGTCTTCTATAAAACCTATAAGCTTTA TAGGCGCAAGCTATGTTGAAATTATAAGAGGTACTCCTCTTTTGGTACAACTTTTATTGATATACAATGGCCTTATGCAA TTTGGAATAGATATACCCGCTTTTACAGCAGGCGTTTTTGCTCTTGCCATAAATAGCGCTGCCTATGTTGCAGAGATTAT AAGGGCAGGTATACAAGCGGTAGACCCTGGTCAAAACGAAGCAGCTCGCTCTCTTGGCATGACTCATGCTATGGCGATGA GGTACGTTATAATTCCTCAGGCAATAAAAAATATCCTTCCTGCTTTGGGAAATGAATTTATCGTGATGCTCAAAGAATCA GCTATTATATCAGTAATAGGTTTTGCAGACCTTACAAGGCAAGCAGATATTATACAAAGCATTACTTATAAGTATTTCGA GCCTTACATCATCATTGCAGCTATATATTTTATAATGACCTTCATCTTTTCAAGACTCCTTGGAATCTTTGAAAGGAGGC TTAGGGCTGGTGATACGCGTTAA
Upstream 100 bases:
>100_bases TATGACAAACTTGTAGATAAATGGTTTAAGTAATGATGAAATTTAGTGGAGAATTTTCAAAATAGTTCTCCACTAAAATT TTGCAGAAAGGAAGATTTTT
Downstream 100 bases:
>100_bases TGAGGTGTATAAAACCTTTGGGGATTTAGAAGTATTAAAAGGTGTAAGTTTAAATGTAAATAAAGGAGAAGTTGTTGTAA TAATAGGACCAAGCGGTTCA
Product: polar amino acid ABC transporter, inner membrane subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MSVDFLSMVKYSHLFVSGLLMTLKLTFLAVTIGVILGLIVALIKMSSIKPISFIGASYVEIIRGTPLLVQLLLIYNGLMQ FGIDIPAFTAGVFALAINSAAYVAEIIRAGIQAVDPGQNEAARSLGMTHAMAMRYVIIPQAIKNILPALGNEFIVMLKES AIISVIGFADLTRQADIIQSITYKYFEPYIIIAAIYFIMTFIFSRLLGIFERRLRAGDTR
Sequences:
>Translated_220_residues MSVDFLSMVKYSHLFVSGLLMTLKLTFLAVTIGVILGLIVALIKMSSIKPISFIGASYVEIIRGTPLLVQLLLIYNGLMQ FGIDIPAFTAGVFALAINSAAYVAEIIRAGIQAVDPGQNEAARSLGMTHAMAMRYVIIPQAIKNILPALGNEFIVMLKES AIISVIGFADLTRQADIIQSITYKYFEPYIIIAAIYFIMTFIFSRLLGIFERRLRAGDTR >Mature_219_residues SVDFLSMVKYSHLFVSGLLMTLKLTFLAVTIGVILGLIVALIKMSSIKPISFIGASYVEIIRGTPLLVQLLLIYNGLMQF GIDIPAFTAGVFALAINSAAYVAEIIRAGIQAVDPGQNEAARSLGMTHAMAMRYVIIPQAIKNILPALGNEFIVMLKESA IISVIGFADLTRQADIIQSITYKYFEPYIIIAAIYFIMTFIFSRLLGIFERRLRAGDTR
Specific function: Part of a binding-protein-dependent transport system for arginine. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788226, Length=197, Percent_Identity=41.1167512690355, Blast_Score=158, Evalue=2e-40, Organism=Escherichia coli, GI1787030, Length=217, Percent_Identity=34.5622119815668, Blast_Score=134, Evalue=5e-33, Organism=Escherichia coli, GI1786873, Length=219, Percent_Identity=34.703196347032, Blast_Score=125, Evalue=3e-30, Organism=Escherichia coli, GI1787087, Length=224, Percent_Identity=29.9107142857143, Blast_Score=112, Evalue=2e-26, Organism=Escherichia coli, GI1788646, Length=221, Percent_Identity=33.0316742081448, Blast_Score=109, Evalue=1e-25, Organism=Escherichia coli, GI1788645, Length=207, Percent_Identity=35.7487922705314, Blast_Score=108, Evalue=3e-25, Organism=Escherichia coli, GI48994930, Length=131, Percent_Identity=38.9312977099237, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI87082239, Length=208, Percent_Identity=30.2884615384615, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1786874, Length=212, Percent_Identity=28.7735849056604, Blast_Score=94, Evalue=8e-21, Organism=Escherichia coli, GI1787086, Length=225, Percent_Identity=26.6666666666667, Blast_Score=79, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 24190; Mature: 24059
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVDFLSMVKYSHLFVSGLLMTLKLTFLAVTIGVILGLIVALIKMSSIKPISFIGASYVE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH IIRGTPLLVQLLLIYNGLMQFGIDIPAFTAGVFALAINSAAYVAEIIRAGIQAVDPGQNE HHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH AARSLGMTHAMAMRYVIIPQAIKNILPALGNEFIVMLKESAIISVIGFADLTRQADIIQS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEHHHHHHHHHHHHHHHHHHHHHHH ITYKYFEPYIIIAAIYFIMTFIFSRLLGIFERRLRAGDTR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SVDFLSMVKYSHLFVSGLLMTLKLTFLAVTIGVILGLIVALIKMSSIKPISFIGASYVE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH IIRGTPLLVQLLLIYNGLMQFGIDIPAFTAGVFALAINSAAYVAEIIRAGIQAVDPGQNE HHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH AARSLGMTHAMAMRYVIIPQAIKNILPALGNEFIVMLKESAIISVIGFADLTRQADIIQS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEHHHHHHHHHHHHHHHHHHHHHHH ITYKYFEPYIIIAAIYFIMTFIFSRLLGIFERRLRAGDTR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]