Click here to switch to the map view.

The map label for this gene is fliD [H]

Identifier: 167039125

GI number: 167039125

Start: 477074

End: 478633

Strand: Direct

Name: fliD [H]

Synonym: Teth514_0464

Alternate gene names: 167039125

Gene position: 477074-478633 (Clockwise)

Preceding gene: 167039124

Following gene: 167039126

Centisome position: 19.41

GC content: 34.68

Gene sequence:

>1560_bases
ATGGATCCAATAAGTATGAATAGCTACAATATGAGCAATTTATTAAGAATAAGTGGTCTTGCGACAGGACTCGATACTGA
TTCTATTGTACAACAGTTAATAAGAGCTGCCAGTATTCCTCTTGATAGATTAGAACAACAAAAGCAATGGTATCAATGGC
AACAAGAGGATTTAAGGGATATAAACAGTCAGCTTATGTCACTCCGAAATGACAATGTTTTTAAGCTCAAATTGCAGGGA
ACTTTTATGGCAAAAACTGTTACATCGTCAAATCCTTCAGTTGCTACCGCTACAGCAGGGGCAAATGCGGTGAATGGATC
GTATACCATATCAGTATCGCAATTGGCTCAAGCCGCTACAACTGCAAGTACAGATAAAATTGGTGCTGCAACTAAAAATT
CTGATGGAACATATACGTATAATGCACTTAATAATACGGGAAGCGATATAACTCTTTATTTAAAAGGATTAGATGGAAAT
GACAAAGAAATAATAATAAAAAATGGTGCGACAATAAAAGACATAGTTGCTGCAATAAATGCCAAAACTAATGAGACAGG
TGTAAGTGCTACATATGACCCAGGCTTAGATAGGCTATTTTTGGTATCAAATTTTACTGGAACAAATTCAAAGATTGATT
TCAGTGGTACTACAGATCCAACTGCTCAAAATTTTTTAACAACTACGTTAAAGTTAGATTCAAAAGTTTTGGACACTGGA
GGTATAACAGGCCAAGATGCACTATTTACTTTTAACGGTGTTCAAATGACAAGTTCAACTAACAATGTCACAGTAGCAGG
AATAAATATTACCCTTACAGGAACAAGTAATAGCACAACAACCCTTACTGTTTTAACAGATGTTGACAAAATATATAACA
CAATAAAAAGCTTTGTTGACAGTTACAATGATATAATTACAAAGATTAATGCAAAGCTTACAGAAAAAAGGTATTACGAT
TATCCACCTTTGACTTCTGAACAAAAACAAGCTATGAAAGACAGTGATATAAAACTATGGGAAGAAAAGGCAAGGTCAGG
GAATTTAAACAATGACGAAACTTTAATGCGAGTATATTACTCCATGAGAAATGTTGTTTCATCGACAGTATCCGGTGTAG
GTTCTTTAAGTTCAATTGGCATTACTACAGGACAATGGTATGAAGGTGGAAAACTTTATATCGACGAAACGAAGTTAAAA
GATGCTATTGCAAATGATCTGGACAAAGTAATGAAGATATTTGCTGGTGTTTATGAGACAGATTCTAATGGAAATACTAC
TTTGAAAACTTCAGGCATTGCACAAAATTTATATGATACTTTAAAACAAGGCATAGATGCCATAACAAGAAAAGCAGGGA
GTACCGCTCAGCTTTACGATACAAGCTTTATAGGAAACAGGATAAGAGAAATAGATGATAGGATTGCTCAAATGCAAAGA
TATTTAAACGACCTTGAAAAGAGGTATTACGCGCAATTTACGCAGCTAGAAATGTATGTAGGACAAATGAATTCTCAAAG
TGCGTGGTTGAGCCAACAAATTGGGGTTATGATGAAATAA

Upstream 100 bases:

>100_bases
TTGACGAGATTCCTCCTGAAAAAATACTTGACCTTGTGGCAGGATTATGGAAAATAGCTGGACTTTTTGTGGATAGAAAA
ATATAGTTGGGGGTATTAAG

Downstream 100 bases:

>100_bases
AAGGGGGTGCGGTGATGGTAAATCCGTATCAGCAGTACAAAGAAAACGCGATTTTGACAGCCAGTCCTGAAGAGCTGGTA
CTGATGCTTTACAATGGCAT

Product: flagellar hook-associated 2 domain-containing protein

Products: NA

Alternate protein names: HAP2; Filament cap protein [H]

Number of amino acids: Translated: 519; Mature: 519

Protein sequence:

>519_residues
MDPISMNSYNMSNLLRISGLATGLDTDSIVQQLIRAASIPLDRLEQQKQWYQWQQEDLRDINSQLMSLRNDNVFKLKLQG
TFMAKTVTSSNPSVATATAGANAVNGSYTISVSQLAQAATTASTDKIGAATKNSDGTYTYNALNNTGSDITLYLKGLDGN
DKEIIIKNGATIKDIVAAINAKTNETGVSATYDPGLDRLFLVSNFTGTNSKIDFSGTTDPTAQNFLTTTLKLDSKVLDTG
GITGQDALFTFNGVQMTSSTNNVTVAGINITLTGTSNSTTTLTVLTDVDKIYNTIKSFVDSYNDIITKINAKLTEKRYYD
YPPLTSEQKQAMKDSDIKLWEEKARSGNLNNDETLMRVYYSMRNVVSSTVSGVGSLSSIGITTGQWYEGGKLYIDETKLK
DAIANDLDKVMKIFAGVYETDSNGNTTLKTSGIAQNLYDTLKQGIDAITRKAGSTAQLYDTSFIGNRIREIDDRIAQMQR
YLNDLEKRYYAQFTQLEMYVGQMNSQSAWLSQQIGVMMK

Sequences:

>Translated_519_residues
MDPISMNSYNMSNLLRISGLATGLDTDSIVQQLIRAASIPLDRLEQQKQWYQWQQEDLRDINSQLMSLRNDNVFKLKLQG
TFMAKTVTSSNPSVATATAGANAVNGSYTISVSQLAQAATTASTDKIGAATKNSDGTYTYNALNNTGSDITLYLKGLDGN
DKEIIIKNGATIKDIVAAINAKTNETGVSATYDPGLDRLFLVSNFTGTNSKIDFSGTTDPTAQNFLTTTLKLDSKVLDTG
GITGQDALFTFNGVQMTSSTNNVTVAGINITLTGTSNSTTTLTVLTDVDKIYNTIKSFVDSYNDIITKINAKLTEKRYYD
YPPLTSEQKQAMKDSDIKLWEEKARSGNLNNDETLMRVYYSMRNVVSSTVSGVGSLSSIGITTGQWYEGGKLYIDETKLK
DAIANDLDKVMKIFAGVYETDSNGNTTLKTSGIAQNLYDTLKQGIDAITRKAGSTAQLYDTSFIGNRIREIDDRIAQMQR
YLNDLEKRYYAQFTQLEMYVGQMNSQSAWLSQQIGVMMK
>Mature_519_residues
MDPISMNSYNMSNLLRISGLATGLDTDSIVQQLIRAASIPLDRLEQQKQWYQWQQEDLRDINSQLMSLRNDNVFKLKLQG
TFMAKTVTSSNPSVATATAGANAVNGSYTISVSQLAQAATTASTDKIGAATKNSDGTYTYNALNNTGSDITLYLKGLDGN
DKEIIIKNGATIKDIVAAINAKTNETGVSATYDPGLDRLFLVSNFTGTNSKIDFSGTTDPTAQNFLTTTLKLDSKVLDTG
GITGQDALFTFNGVQMTSSTNNVTVAGINITLTGTSNSTTTLTVLTDVDKIYNTIKSFVDSYNDIITKINAKLTEKRYYD
YPPLTSEQKQAMKDSDIKLWEEKARSGNLNNDETLMRVYYSMRNVVSSTVSGVGSLSSIGITTGQWYEGGKLYIDETKLK
DAIANDLDKVMKIFAGVYETDSNGNTTLKTSGIAQNLYDTLKQGIDAITRKAGSTAQLYDTSFIGNRIREIDDRIAQMQR
YLNDLEKRYYAQFTQLEMYVGQMNSQSAWLSQQIGVMMK

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

Organism=Escherichia coli, GI1788233, Length=512, Percent_Identity=26.953125, Blast_Score=84, Evalue=3e-17,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010810
- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07196 Flagellin_IN; PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 56975; Mature: 56975

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPISMNSYNMSNLLRISGLATGLDTDSIVQQLIRAASIPLDRLEQQKQWYQWQQEDLRD
CCCCCCCCCCHHHHHEEHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
INSQLMSLRNDNVFKLKLQGTFMAKTVTSSNPSVATATAGANAVNGSYTISVSQLAQAAT
HHHHHHHHCCCCEEEEEECCEEEEEEECCCCCCEEEEECCCCCCCCEEEEEHHHHHHHHH
TASTDKIGAATKNSDGTYTYNALNNTGSDITLYLKGLDGNDKEIIIKNGATIKDIVAAIN
HCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCEEEEECCCHHHHHHHHHC
AKTNETGVSATYDPGLDRLFLVSNFTGTNSKIDFSGTTDPTAQNFLTTTLKLDSKVLDTG
CCCCCCCCEEECCCCCCEEEEEEECCCCCCEEEECCCCCCCHHHHEEEEEEECCEEECCC
GITGQDALFTFNGVQMTSSTNNVTVAGINITLTGTSNSTTTLTVLTDVDKIYNTIKSFVD
CCCCCCCEEEECCEEEECCCCCEEEEEEEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHH
SYNDIITKINAKLTEKRYYDYPPLTSEQKQAMKDSDIKLWEEKARSGNLNNDETLMRVYY
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHH
SMRNVVSSTVSGVGSLSSIGITTGQWYEGGKLYIDETKLKDAIANDLDKVMKIFAGVYET
HHHHHHHHHHHCCCCHHHCCCCCCCEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHEEE
DSNGNTTLKTSGIAQNLYDTLKQGIDAITRKAGSTAQLYDTSFIGNRIREIDDRIAQMQR
CCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHH
YLNDLEKRYYAQFTQLEMYVGQMNSQSAWLSQQIGVMMK
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCC
>Mature Secondary Structure
MDPISMNSYNMSNLLRISGLATGLDTDSIVQQLIRAASIPLDRLEQQKQWYQWQQEDLRD
CCCCCCCCCCHHHHHEEHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
INSQLMSLRNDNVFKLKLQGTFMAKTVTSSNPSVATATAGANAVNGSYTISVSQLAQAAT
HHHHHHHHCCCCEEEEEECCEEEEEEECCCCCCEEEEECCCCCCCCEEEEEHHHHHHHHH
TASTDKIGAATKNSDGTYTYNALNNTGSDITLYLKGLDGNDKEIIIKNGATIKDIVAAIN
HCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCEEEEECCCHHHHHHHHHC
AKTNETGVSATYDPGLDRLFLVSNFTGTNSKIDFSGTTDPTAQNFLTTTLKLDSKVLDTG
CCCCCCCCEEECCCCCCEEEEEEECCCCCCEEEECCCCCCCHHHHEEEEEEECCEEECCC
GITGQDALFTFNGVQMTSSTNNVTVAGINITLTGTSNSTTTLTVLTDVDKIYNTIKSFVD
CCCCCCCEEEECCEEEECCCCCEEEEEEEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHH
SYNDIITKINAKLTEKRYYDYPPLTSEQKQAMKDSDIKLWEEKARSGNLNNDETLMRVYY
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHH
SMRNVVSSTVSGVGSLSSIGITTGQWYEGGKLYIDETKLKDAIANDLDKVMKIFAGVYET
HHHHHHHHHHHCCCCHHHCCCCCCCEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHEEE
DSNGNTTLKTSGIAQNLYDTLKQGIDAITRKAGSTAQLYDTSFIGNRIREIDDRIAQMQR
CCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHH
YLNDLEKRYYAQFTQLEMYVGQMNSQSAWLSQQIGVMMK
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8195064; 9384377 [H]