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The map label for this gene is farR [C]

Identifier: 167039037

GI number: 167039037

Start: 382095

End: 382451

Strand: Reverse

Name: farR [C]

Synonym: Teth514_0374

Alternate gene names: 167039037

Gene position: 382451-382095 (Counterclockwise)

Preceding gene: 167039038

Following gene: 167039036

Centisome position: 15.56

GC content: 28.57

Gene sequence:

>357_bases
ATGCTAAGAAAAGTAGATAAACACAGTGGAGTGCCTGCATATTTACAAATAGTAAACATGATAAAATCAGAAATTTTATT
AGGTAACCTTCAAAAAGGCAGTCAACTTCCATCTATCAGAGATTTACAGGTGATATTTGACGTAAATATAAATACAGTTA
TAAAAGCTTTAGAAAAATTAAAAAACGAAGGATATATAGAGTCAGAGCAAGGCATAGGATATTTTATAAAGAAAGACATT
GATGTAGAAGAAGGTGTAATAAAAATTATAAGAGAATGTGTCACAAAATTGAAAAACAGTCGTATAGACTATTATACTTC
TATGTTAATTTTTGAGGAGGTCTGGAAAAATGAATGA

Upstream 100 bases:

>100_bases
TGCAACAGGCGGTTCTTTAAAAATTATAAACAAAAGCAAAGCTCCTATCGACATAAAAAATTTAGGCATTATAAAATTAA
TCAGAGAGTGATGGTGCAAA

Downstream 100 bases:

>100_bases
AGTGATAAATAAAATGGATATTTATATACAGAAAGAATTAAAGGAGAAAACTGTAAGAATACTTTTTCTTACTTTTCTAC
TATTCATACCAGTAATATTA

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: Regulatory Protein GntR HTH; Transcriptional Regulator GntR Family; GntR-Family Transcriptional Regulator; Transcriptional Regulator; Gntr Family Transcriptional Regulator

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MLRKVDKHSGVPAYLQIVNMIKSEILLGNLQKGSQLPSIRDLQVIFDVNINTVIKALEKLKNEGYIESEQGIGYFIKKDI
DVEEGVIKIIRECVTKLKNSRIDYYTSMLIFEEVWKNE

Sequences:

>Translated_118_residues
MLRKVDKHSGVPAYLQIVNMIKSEILLGNLQKGSQLPSIRDLQVIFDVNINTVIKALEKLKNEGYIESEQGIGYFIKKDI
DVEEGVIKIIRECVTKLKNSRIDYYTSMLIFEEVWKNE
>Mature_118_residues
MLRKVDKHSGVPAYLQIVNMIKSEILLGNLQKGSQLPSIRDLQVIFDVNINTVIKALEKLKNEGYIESEQGIGYFIKKDI
DVEEGVIKIIRECVTKLKNSRIDYYTSMLIFEEVWKNE

Specific function: Possible Transcriptional Regulator Of The Succinyl-CoA- Synthetase Operon. Binds Specifically To The Farr Promoter And Exhibits Weak Binding To The Citrate Synthase And Lipoamide Dehydrogenase Promoters. Binding At The Farr Promoter Is Abolished By Long-

COG id: COG1725

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13632; Mature: 13632

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRKVDKHSGVPAYLQIVNMIKSEILLGNLQKGSQLPSIRDLQVIFDVNINTVIKALEKL
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHH
KNEGYIESEQGIGYFIKKDIDVEEGVIKIIRECVTKLKNSRIDYYTSMLIFEEVWKNE
HCCCCEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLRKVDKHSGVPAYLQIVNMIKSEILLGNLQKGSQLPSIRDLQVIFDVNINTVIKALEKL
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHH
KNEGYIESEQGIGYFIKKDIDVEEGVIKIIRECVTKLKNSRIDYYTSMLIFEEVWKNE
HCCCCEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA