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The map label for this gene is yfdV [C]

Identifier: 167039031

GI number: 167039031

Start: 376831

End: 377778

Strand: Reverse

Name: yfdV [C]

Synonym: Teth514_0368

Alternate gene names: 167039031

Gene position: 377778-376831 (Counterclockwise)

Preceding gene: 167039035

Following gene: 167039023

Centisome position: 15.37

GC content: 31.96

Gene sequence:

>948_bases
ATGGAAACTTTCTTCTCTGCAGTTCAGGGAGTTTTAATAATTGTATTTATATTAGCACTTGGCTATTATCTATCAAAAAT
AGGGTGGTTTGATAAATCAACATCAGACCTTTTTGCAAAGCTTGTAATTAATGTATCTTTACCTCTTAATATGATTGTAA
ACATTTCTACAACTTTTTCTAAAGAACAACTAGAACACTCAGTAAGAGGACTTTTAATTCCGTTTTTATCTATACTTCTA
TCCTATATAGTGGCTTACATATTTGCTGAAACTTTTAAAATAAAAAAGGGAAGAAAAGGTGTTTTTGTAGTGATATTCTC
CCTCTCAAATACTATTTTTGTTGGACTACCTATGGCTCAAGCTCTTTTTGGAGATATAGCAACACCTTACGCGCTTTTAT
ATTACATGGCAAACACTACAATATTGTGGACTTTAGGAGTATATAGTGTTATAAGAGATGTAAATGGAAAAGAAAGAAAC
GTTGAAAACTGGGATACAATAAAGAGAATATTCAATCCTCCTCTTTTAGGTTTTATAATAGGAGTAATTTTTGTGCTTGC
AAATATTTCTCTTCCAAAATTTCTCTTTGAAAGCTTTAGAATGATTGGAAATCTCACTACTCCTTTATCAATATTCTACA
TTGGCATAGTCATTCATGAAATGGGTTTTGATAAATTTAAACTTAACAAAGATGTTGCTCTGGTTTTTATTGGAAGATTC
CTAATAACTCCTGCCCTTGTATTGCTTCTAAACATATTCATCCCTGTGCCAAAGCTTATGAGAGATGTATTTGTCATAAT
GTCAGCAATGCCTGTGCTGGTAAACTCTGCAATTATAGCAAGAGTTTACGGAGCAGATTATGAATTTGCCACAAGTATGA
TCACATATACAACAATATCCAGTGTCGTTATAATGCCCTTTTTGATGGTCTTACTACGAGTAATTTAA

Upstream 100 bases:

>100_bases
CATATAATATCTTCCCTCTTTGAAATTTTTATCATTTTATGTTATCCTTAATAAATAAGTCTAACACAGTGCTATATTCT
CTCATAAGGAGGCTCTTTTG

Downstream 100 bases:

>100_bases
TACTCTCTTTCCAATCCATGTAAGAATATCTTCATAAACCTTTTCCCTCTCTACTTCATTGAGAAGTTCATGCCTTTTCC
CCAAATAAAGCTTCATATCA

Product: auxin efflux carrier

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
METFFSAVQGVLIIVFILALGYYLSKIGWFDKSTSDLFAKLVINVSLPLNMIVNISTTFSKEQLEHSVRGLLIPFLSILL
SYIVAYIFAETFKIKKGRKGVFVVIFSLSNTIFVGLPMAQALFGDIATPYALLYYMANTTILWTLGVYSVIRDVNGKERN
VENWDTIKRIFNPPLLGFIIGVIFVLANISLPKFLFESFRMIGNLTTPLSIFYIGIVIHEMGFDKFKLNKDVALVFIGRF
LITPALVLLLNIFIPVPKLMRDVFVIMSAMPVLVNSAIIARVYGADYEFATSMITYTTISSVVIMPFLMVLLRVI

Sequences:

>Translated_315_residues
METFFSAVQGVLIIVFILALGYYLSKIGWFDKSTSDLFAKLVINVSLPLNMIVNISTTFSKEQLEHSVRGLLIPFLSILL
SYIVAYIFAETFKIKKGRKGVFVVIFSLSNTIFVGLPMAQALFGDIATPYALLYYMANTTILWTLGVYSVIRDVNGKERN
VENWDTIKRIFNPPLLGFIIGVIFVLANISLPKFLFESFRMIGNLTTPLSIFYIGIVIHEMGFDKFKLNKDVALVFIGRF
LITPALVLLLNIFIPVPKLMRDVFVIMSAMPVLVNSAIIARVYGADYEFATSMITYTTISSVVIMPFLMVLLRVI
>Mature_315_residues
METFFSAVQGVLIIVFILALGYYLSKIGWFDKSTSDLFAKLVINVSLPLNMIVNISTTFSKEQLEHSVRGLLIPFLSILL
SYIVAYIFAETFKIKKGRKGVFVVIFSLSNTIFVGLPMAQALFGDIATPYALLYYMANTTILWTLGVYSVIRDVNGKERN
VENWDTIKRIFNPPLLGFIIGVIFVLANISLPKFLFESFRMIGNLTTPLSIFYIGIVIHEMGFDKFKLNKDVALVFIGRF
LITPALVLLLNIFIPVPKLMRDVFVIMSAMPVLVNSAIIARVYGADYEFATSMITYTTISSVVIMPFLMVLLRVI

Specific function: Unknown

COG id: COG0679

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the auxin efflux carrier (TC 2.A.69) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004776
- InterPro:   IPR014024 [H]

Pfam domain/function: PF03547 Mem_trans [H]

EC number: NA

Molecular weight: Translated: 35441; Mature: 35441

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METFFSAVQGVLIIVFILALGYYLSKIGWFDKSTSDLFAKLVINVSLPLNMIVNISTTFS
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHEEEECCHHH
KEQLEHSVRGLLIPFLSILLSYIVAYIFAETFKIKKGRKGVFVVIFSLSNTIFVGLPMAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEECHHHH
ALFGDIATPYALLYYMANTTILWTLGVYSVIRDVNGKERNVENWDTIKRIFNPPLLGFII
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHH
GVIFVLANISLPKFLFESFRMIGNLTTPLSIFYIGIVIHEMGFDKFKLNKDVALVFIGRF
HHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHH
LITPALVLLLNIFIPVPKLMRDVFVIMSAMPVLVNSAIIARVYGADYEFATSMITYTTIS
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
SVVIMPFLMVLLRVI
HHHHHHHHHHHHHHC
>Mature Secondary Structure
METFFSAVQGVLIIVFILALGYYLSKIGWFDKSTSDLFAKLVINVSLPLNMIVNISTTFS
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHEEEECCHHH
KEQLEHSVRGLLIPFLSILLSYIVAYIFAETFKIKKGRKGVFVVIFSLSNTIFVGLPMAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEECHHHH
ALFGDIATPYALLYYMANTTILWTLGVYSVIRDVNGKERNVENWDTIKRIFNPPLLGFII
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHH
GVIFVLANISLPKFLFESFRMIGNLTTPLSIFYIGIVIHEMGFDKFKLNKDVALVFIGRF
HHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHH
LITPALVLLLNIFIPVPKLMRDVFVIMSAMPVLVNSAIIARVYGADYEFATSMITYTTIS
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
SVVIMPFLMVLLRVI
HHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]