| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is ylxW [H]
Identifier: 167038883
GI number: 167038883
Start: 224444
End: 225181
Strand: Reverse
Name: ylxW [H]
Synonym: Teth514_0214
Alternate gene names: 167038883
Gene position: 225181-224444 (Counterclockwise)
Preceding gene: 167038884
Following gene: 167038878
Centisome position: 9.16
GC content: 35.77
Gene sequence:
>738_bases TTGAAAGGAAAGGCATTGCAAACTTTATCTTTGATACTTGTATTTATTGCAATGGGTCTCATGATTTCTATGCAATTTAA AACTGTACAAGGCGGCGATAAACCTCCTACCTCTATTTCAGTTACAAACTCTGCAAGATTAGAAGAACTTACTCAACAGC TCAAAAAAGCTCAAGAAGAAAAGGCAAATTTAGAACAGCAATTAGAAGAACTCACTAAAAGATTTAAAGAGTACGAAGAT GTTGCATCAAAAGATGATGCCGCTTTAAAAAATCTACAGCAGGATGTTGAAAAATACAAAATTTTAGCAGGACTTACAGA TATGGTAGGCCCAGGAGTTATAGTAACGGTAAATGACAGCGACTTACAGCCTCGAGACGGGGAAGACCCTAATTTGTACT TAGTCCATGATGAAGATTTATTAAGTATTGTAAATGAATTGAAAGCGGGTGGAGCTGAAGCAATAGCTATAAACAACCAA AGAATAATTGCAACATCTGAAATACGATGCGTAGGTCCAACGATAATCATAAACTCTACCAGGTATGCTCCTCCTTACGT AATAAAAGCAATAGGAGACCCTGACACATTGCAAGCAGCTCTTAATTTAAAAGGCGGAATAGTAGATACTTTAAGATTTT ATGGTATTAAAGTAGACATACAAACTTCTGATAAAATAGTGGTACCTAAATACAGTGACCCTATTAAATTCTTTTACGCT AAACCTGTGACTCCCTAA
Upstream 100 bases:
>100_bases GTATTTATAGAGTATCATAGTTATTTATAAAAGTGCATATAAGCTGAAACCAAAAGCAAGACGAAGATGTCTTTTTATAT AGAGAAAGGATGTGGAGAAA
Downstream 100 bases:
>100_bases ACTCTCTTACCTTTTAATAAAGGATAAACTTCCGACACATTCTCTAAACTCATAGCATATATCCTCTATATCTAAAAGAT CAGATACATTTGCTATCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MKGKALQTLSLILVFIAMGLMISMQFKTVQGGDKPPTSISVTNSARLEELTQQLKKAQEEKANLEQQLEELTKRFKEYED VASKDDAALKNLQQDVEKYKILAGLTDMVGPGVIVTVNDSDLQPRDGEDPNLYLVHDEDLLSIVNELKAGGAEAIAINNQ RIIATSEIRCVGPTIIINSTRYAPPYVIKAIGDPDTLQAALNLKGGIVDTLRFYGIKVDIQTSDKIVVPKYSDPIKFFYA KPVTP
Sequences:
>Translated_245_residues MKGKALQTLSLILVFIAMGLMISMQFKTVQGGDKPPTSISVTNSARLEELTQQLKKAQEEKANLEQQLEELTKRFKEYED VASKDDAALKNLQQDVEKYKILAGLTDMVGPGVIVTVNDSDLQPRDGEDPNLYLVHDEDLLSIVNELKAGGAEAIAINNQ RIIATSEIRCVGPTIIINSTRYAPPYVIKAIGDPDTLQAALNLKGGIVDTLRFYGIKVDIQTSDKIVVPKYSDPIKFFYA KPVTP >Mature_245_residues MKGKALQTLSLILVFIAMGLMISMQFKTVQGGDKPPTSISVTNSARLEELTQQLKKAQEEKANLEQQLEELTKRFKEYED VASKDDAALKNLQQDVEKYKILAGLTDMVGPGVIVTVNDSDLQPRDGEDPNLYLVHDEDLLSIVNELKAGGAEAIAINNQ RIIATSEIRCVGPTIIINSTRYAPPYVIKAIGDPDTLQAALNLKGGIVDTLRFYGIKVDIQTSDKIVVPKYSDPIKFFYA KPVTP
Specific function: May be involved in cell division and sporulation [H]
COG id: COG3879
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0749 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010273 [H]
Pfam domain/function: PF05949 DUF881 [H]
EC number: NA
Molecular weight: Translated: 26964; Mature: 26964
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGKALQTLSLILVFIAMGLMISMQFKTVQGGDKPPTSISVTNSARLEELTQQLKKAQEE CCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCEEEECCHHHHHHHHHHHHHHHHH KANLEQQLEELTKRFKEYEDVASKDDAALKNLQQDVEKYKILAGLTDMVGPGVIVTVNDS HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC DLQPRDGEDPNLYLVHDEDLLSIVNELKAGGAEAIAINNQRIIATSEIRCVGPTIIINST CCCCCCCCCCCEEEEECHHHHHHHHHHHCCCCEEEEECCCEEEEECCEEEECCEEEEECC RYAPPYVIKAIGDPDTLQAALNLKGGIVDTLRFYGIKVDIQTSDKIVVPKYSDPIKFFYA CCCCCEEEEECCCHHHHHHHHCCCCCHHHHHHHEEEEEEEECCCEEEECCCCCCEEEEEE KPVTP CCCCC >Mature Secondary Structure MKGKALQTLSLILVFIAMGLMISMQFKTVQGGDKPPTSISVTNSARLEELTQQLKKAQEE CCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCEEEECCHHHHHHHHHHHHHHHHH KANLEQQLEELTKRFKEYEDVASKDDAALKNLQQDVEKYKILAGLTDMVGPGVIVTVNDS HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC DLQPRDGEDPNLYLVHDEDLLSIVNELKAGGAEAIAINNQRIIATSEIRCVGPTIIINST CCCCCCCCCCCEEEEECHHHHHHHHHHHCCCCEEEEECCCEEEEECCEEEECCEEEEECC RYAPPYVIKAIGDPDTLQAALNLKGGIVDTLRFYGIKVDIQTSDKIVVPKYSDPIKFFYA CCCCCEEEEECCCHHHHHHHHCCCCCHHHHHHHEEEEEEEECCCEEEECCCCCCEEEEEE KPVTP CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2556375; 9384377; 12207695 [H]