| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is 167038862
Identifier: 167038862
GI number: 167038862
Start: 194104
End: 194796
Strand: Reverse
Name: 167038862
Synonym: Teth514_0192
Alternate gene names: NA
Gene position: 194796-194104 (Counterclockwise)
Preceding gene: 167038863
Following gene: 167038861
Centisome position: 7.93
GC content: 36.8
Gene sequence:
>693_bases ATGCACATACCTGAAGGCTATATAAGTCCTCAAACCTGCGCTGTTATGGGTGCTGCTATGGTACCAGTCATTTCAGTTGC AGCAAAAAAAGTCAATGAAAGTTTTGACAAAAAAGACATACCTACTTTGGCTATAGGGTCTGCTTTTGCATTTACAATAA TGATGTTTAACGTACCAATACCAGGTGGTACAACTTCCCATGCCATTGGTGCAACTCTCCTTGCAATAACTTTAGGGCCG TGGGCAGCAAGTATATCTCTTACTATAGCTTTATTTATACAAGCATTGCTTTTTGGTGACGGAGGAATTTTAGCTTTGGG TGCAAATAGTTTTAATATAGCTTTTATAGCTCCTTTTGTTGGATACGGAATTTATAAACTTATGTTGTCACTTAAGTTAA ATAAAGTCATATCATCTGCTATAGGGGGATATGTAGGAATAAATGCTGCAGCTCTTGCTACAGCAATAGAACTTGGACTT CAGCCATTGCTTTTTCATACAGCAAATGGAACACCTCTATATTTTCCCTATGGATTAAACGTAGCAATACCTGCAATGAT GTTTGCTCATCTTACTGTAGCTGGTATTGTAGAAGCCATCATAACAGGCCTTGTAGTATATTATTTACAAAAAGCGGATG AGGAAAATATACTGTATAAATTTTCATACAAGCTTAGAGGTGATAATAGATGA
Upstream 100 bases:
>100_bases ATTACAAAAATTGCAGATGAAATTATAAGCACAAAAGGAGTAAAGCATGGAAAACTGGTAATGACAACAACAGGTGAAAA TTTGTAAGGGGGAATTTTTT
Downstream 100 bases:
>100_bases AAAAATTCTACATTGCAGCTATAGTTATAATACTTCTCACTCCTCTCGGGCTTTTAGCTCCTGGTTCGGCATGGGGAGAA TGGGGCTTAGATGAAATTAA
Product: cobalt transport protein CbiM
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MHIPEGYISPQTCAVMGAAMVPVISVAAKKVNESFDKKDIPTLAIGSAFAFTIMMFNVPIPGGTTSHAIGATLLAITLGP WAASISLTIALFIQALLFGDGGILALGANSFNIAFIAPFVGYGIYKLMLSLKLNKVISSAIGGYVGINAAALATAIELGL QPLLFHTANGTPLYFPYGLNVAIPAMMFAHLTVAGIVEAIITGLVVYYLQKADEENILYKFSYKLRGDNR
Sequences:
>Translated_230_residues MHIPEGYISPQTCAVMGAAMVPVISVAAKKVNESFDKKDIPTLAIGSAFAFTIMMFNVPIPGGTTSHAIGATLLAITLGP WAASISLTIALFIQALLFGDGGILALGANSFNIAFIAPFVGYGIYKLMLSLKLNKVISSAIGGYVGINAAALATAIELGL QPLLFHTANGTPLYFPYGLNVAIPAMMFAHLTVAGIVEAIITGLVVYYLQKADEENILYKFSYKLRGDNR >Mature_230_residues MHIPEGYISPQTCAVMGAAMVPVISVAAKKVNESFDKKDIPTLAIGSAFAFTIMMFNVPIPGGTTSHAIGATLLAITLGP WAASISLTIALFIQALLFGDGGILALGANSFNIAFIAPFVGYGIYKLMLSLKLNKVISSAIGGYVGINAAALATAIELGL QPLLFHTANGTPLYFPYGLNVAIPAMMFAHLTVAGIVEAIITGLVVYYLQKADEENILYKFSYKLRGDNR
Specific function: Unknown
COG id: COG0310
COG function: function code P; ABC-type Co2+ transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002751 [H]
Pfam domain/function: PF01891 CbiM [H]
EC number: NA
Molecular weight: Translated: 24262; Mature: 24262
Theoretical pI: Translated: 8.39; Mature: 8.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHIPEGYISPQTCAVMGAAMVPVISVAAKKVNESFDKKDIPTLAIGSAFAFTIMMFNVPI CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHEEECCC PGGTTSHAIGATLLAITLGPWAASISLTIALFIQALLFGDGGILALGANSFNIAFIAPFV CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEHHHH GYGIYKLMLSLKLNKVISSAIGGYVGINAAALATAIELGLQPLLFHTANGTPLYFPYGLN HHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHCCCEEEEECCCCCEEEEECCCC VAIPAMMFAHLTVAGIVEAIITGLVVYYLQKADEENILYKFSYKLRGDNR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCC >Mature Secondary Structure MHIPEGYISPQTCAVMGAAMVPVISVAAKKVNESFDKKDIPTLAIGSAFAFTIMMFNVPI CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHEEECCC PGGTTSHAIGATLLAITLGPWAASISLTIALFIQALLFGDGGILALGANSFNIAFIAPFV CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEHHHH GYGIYKLMLSLKLNKVISSAIGGYVGINAAALATAIELGLQPLLFHTANGTPLYFPYGLN HHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHCCCEEEEECCCCCEEEEECCCC VAIPAMMFAHLTVAGIVEAIITGLVVYYLQKADEENILYKFSYKLRGDNR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]