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The map label for this gene is abrB [H]

Identifier: 167038735

GI number: 167038735

Start: 64485

End: 64736

Strand: Reverse

Name: abrB [H]

Synonym: Teth514_0062

Alternate gene names: 167038735

Gene position: 64736-64485 (Counterclockwise)

Preceding gene: 167038744

Following gene: 167038732

Centisome position: 2.63

GC content: 37.7

Gene sequence:

>252_bases
ATGTTGAAATCCACAGGTATTGTAAGAAAAGTAGACGAATTGGGAAGGGTAGTAATACCAATCGAGCTCAGGAGGACACT
TAACATAGCAGAGAGAGACGCTCTTGAAATCTATGTTGATGGGGAACAAATAGTCCTCAAAAAGTATGAGCCTGCTTGCA
TTTTCTGCGGCAACGCTGAGAATGTAATAAACTACAAAGGCAAAAATATATGTAAAAATTGCCTTGAAGAGTTAAAGAAA
TCTGTAGACTAA

Upstream 100 bases:

>100_bases
TTAAAAAATTCCAAAAAAGGTGTTGACTTATTTTTCAAAACTTGGTATTATTATAAGTGAAGTTTAGTTGTCGAATTTTG
TAACTCAGGAGGGGAGAAAA

Downstream 100 bases:

>100_bases
TAGCAGGATAAATAATAGGAGGGTATGTCCTCCTATTATTTATCCTCTTCTTTTTTTCCTTCCGGTTCTATATGGATTAT
CACATGGGAATCAGGAAATT

Product: AbrB family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 83; Mature: 83

Protein sequence:

>83_residues
MLKSTGIVRKVDELGRVVIPIELRRTLNIAERDALEIYVDGEQIVLKKYEPACIFCGNAENVINYKGKNICKNCLEELKK
SVD

Sequences:

>Translated_83_residues
MLKSTGIVRKVDELGRVVIPIELRRTLNIAERDALEIYVDGEQIVLKKYEPACIFCGNAENVINYKGKNICKNCLEELKK
SVD
>Mature_83_residues
MLKSTGIVRKVDELGRVVIPIELRRTLNIAERDALEIYVDGEQIVLKKYEPACIFCGNAENVINYKGKNICKNCLEELKK
SVD

Specific function: Ambiactive repressor and activator of the transcription of genes expressed during the transition state between vegetative growth and the onset of stationary phase and sporulation. It controls the expression of genes spovG and tycA. AbrB binds to the tycA

COG id: COG2002

COG function: function code K; Regulators of stationary/sporulation gene expression

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis abh and spoVT [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006339
- InterPro:   IPR007159 [H]

Pfam domain/function: PF04014 SpoVT_AbrB [H]

EC number: NA

Molecular weight: Translated: 9425; Mature: 9425

Theoretical pI: Translated: 7.90; Mature: 7.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKSTGIVRKVDELGRVVIPIELRRTLNIAERDALEIYVDGEQIVLKKYEPACIFCGNAE
CCCCCCHHHHHHHCCCEEEEEEHHCCCCCCCCCEEEEEECCCEEEEEECCCEEEEECCCC
NVINYKGKNICKNCLEELKKSVD
CEEEECCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLKSTGIVRKVDELGRVVIPIELRRTLNIAERDALEIYVDGEQIVLKKYEPACIFCGNAE
CCCCCCHHHHHHHCCCEEEEEEHHCCCCCCCCCEEEEEECCCEEEEEECCCEEEEECCCC
NVINYKGKNICKNCLEELKKSVD
CEEEECCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3145384; 2554317; 7584024; 9384377; 2504584; 1908787 [H]