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The map label for this gene is rpfG [H]

Identifier: 167038712

GI number: 167038712

Start: 41614

End: 42657

Strand: Direct

Name: rpfG [H]

Synonym: Teth514_0038

Alternate gene names: 167038712

Gene position: 41614-42657 (Clockwise)

Preceding gene: 167038711

Following gene: 167038713

Centisome position: 1.69

GC content: 33.62

Gene sequence:

>1044_bases
ATGAAGAAGATACAAAAAAAAGTGTACTATTCTGCTTTGTTACATGATATAGGACAAGGAGATGTATACGAAGATTTTAA
CAAAGACGAATGGTGGAAACACAGTGAAAGAGGAAGTGAGATTGTAAAGAAGTTGCCTTTTGGAGAAAATTTTTCGGATA
TTATAAGATATCATCATGAAAATTACGATGGAAGCGGACATTTTAAACTAAATGGGGACTCTATTCCTTTAGGAGCTCAA
ATTGTTTTTATATCTGATCAATTTGATATACGGTACACCTCATTGGTTGGGAAAGAAAGTGAGTATAATATTCGGAATAA
TATCAAAGAATGTATAAAAAGTGGTACTGGCAAGATGTTCAATCCTGTGGTTGCAAAGGCATTACTTGACCTTACAAGAC
AAGAAAAATTTTGGCTTGATTATAAATTTTTTGATATAAAAAGTTTATTAAAAAGGATTGAACCTAAAGACACAATTATC
ATAGGAATTAAGGAATTAGAGGATATAGCAGAAGCTTTCGCACAGATTATCGATAATAGAAGCCGTTTTACCTATAACCA
TTCTAAAGGTATTTCAAAGTTAACTTATGAAATGGCTAAGGTGATAGGATATGATGAAGAAACTTCTCGAAAAATAAGAA
TTGCTGGGTTGCTTCATGACCTTGGAAAGCTAGCTGTACCTAATTCTATTCTTGATAAACCGGACAAGCTTACTGAAGAG
GAATTTATGGTTATAAAATCTCATACCTATTATACTAAAGAAATACTCAAAGAAATAGATGGAATAGATGATATAGCAGA
ATGGGCCGCAAATCATCACGAGAAATTAGATGGAAGCGGGTATCCTGAGGGATTAAAAGGTGACGAAATTGGAGAGATTG
ATAGACATGTGGCGGTTTGTGACATGTATCAGGCATTGACAGAAGACAGGCCTTATAGAAAGGGACTTGAACTGAAACAG
GCGATAGACATTATTGCAAAATCGGTGAAAGATAATAAAGTAAGCGGAGAGTCTTTAGAAATTTTAAAAGAAGTAGTGTT
TTAA

Upstream 100 bases:

>100_bases
GCTTTATTTTTGGCCCTTGACGTGCAAGAGTATAAGAACATGGGACATGCAAGAAGAGTGGCTTATATTTCTTTAAGGAT
TTCAGAGATGTTAAATTTAA

Downstream 100 bases:

>100_bases
TGTATACTCAACCGTATTTTAGGAAATAATACGGTTGAGGAGGTATATTATGGGAATGCTTTTCGATTATTTAAAAGAGA
TAGCGGTGACAAAAAATATA

Product: metal dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 347; Mature: 347

Protein sequence:

>347_residues
MKKIQKKVYYSALLHDIGQGDVYEDFNKDEWWKHSERGSEIVKKLPFGENFSDIIRYHHENYDGSGHFKLNGDSIPLGAQ
IVFISDQFDIRYTSLVGKESEYNIRNNIKECIKSGTGKMFNPVVAKALLDLTRQEKFWLDYKFFDIKSLLKRIEPKDTII
IGIKELEDIAEAFAQIIDNRSRFTYNHSKGISKLTYEMAKVIGYDEETSRKIRIAGLLHDLGKLAVPNSILDKPDKLTEE
EFMVIKSHTYYTKEILKEIDGIDDIAEWAANHHEKLDGSGYPEGLKGDEIGEIDRHVAVCDMYQALTEDRPYRKGLELKQ
AIDIIAKSVKDNKVSGESLEILKEVVF

Sequences:

>Translated_347_residues
MKKIQKKVYYSALLHDIGQGDVYEDFNKDEWWKHSERGSEIVKKLPFGENFSDIIRYHHENYDGSGHFKLNGDSIPLGAQ
IVFISDQFDIRYTSLVGKESEYNIRNNIKECIKSGTGKMFNPVVAKALLDLTRQEKFWLDYKFFDIKSLLKRIEPKDTII
IGIKELEDIAEAFAQIIDNRSRFTYNHSKGISKLTYEMAKVIGYDEETSRKIRIAGLLHDLGKLAVPNSILDKPDKLTEE
EFMVIKSHTYYTKEILKEIDGIDDIAEWAANHHEKLDGSGYPEGLKGDEIGEIDRHVAVCDMYQALTEDRPYRKGLELKQ
AIDIIAKSVKDNKVSGESLEILKEVVF
>Mature_347_residues
MKKIQKKVYYSALLHDIGQGDVYEDFNKDEWWKHSERGSEIVKKLPFGENFSDIIRYHHENYDGSGHFKLNGDSIPLGAQ
IVFISDQFDIRYTSLVGKESEYNIRNNIKECIKSGTGKMFNPVVAKALLDLTRQEKFWLDYKFFDIKSLLKRIEPKDTII
IGIKELEDIAEAFAQIIDNRSRFTYNHSKGISKLTYEMAKVIGYDEETSRKIRIAGLLHDLGKLAVPNSILDKPDKLTEE
EFMVIKSHTYYTKEILKEIDGIDDIAEWAANHHEKLDGSGYPEGLKGDEIGEIDRHVAVCDMYQALTEDRPYRKGLELKQ
AIDIIAKSVKDNKVSGESLEILKEVVF

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 39921; Mature: 39921

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIQKKVYYSALLHDIGQGDVYEDFNKDEWWKHSERGSEIVKKLPFGENFSDIIRYHHE
CCHHHHHHHHHHHHHHCCCCCCHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHC
NYDGSGHFKLNGDSIPLGAQIVFISDQFDIRYTSLVGKESEYNIRNNIKECIKSGTGKMF
CCCCCCEEEECCCCCCCCEEEEEEECCCCEEHHHHHCCCCCCCHHHHHHHHHHCCCCCHH
NPVVAKALLDLTRQEKFWLDYKFFDIKSLLKRIEPKDTIIIGIKELEDIAEAFAQIIDNR
HHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCC
SRFTYNHSKGISKLTYEMAKVIGYDEETSRKIRIAGLLHDLGKLAVPNSILDKPDKLTEE
CCEEECHHCCHHHHHHHHHHHHCCCCHHCCEEHHHHHHHHHHHHCCCHHHHCCCCCCCHH
EFMVIKSHTYYTKEILKEIDGIDDIAEWAANHHEKLDGSGYPEGLKGDEIGEIDRHVAVC
HEEEEECCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHH
DMYQALTEDRPYRKGLELKQAIDIIAKSVKDNKVSGESLEILKEVVF
HHHHHHHCCCCHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHC
>Mature Secondary Structure
MKKIQKKVYYSALLHDIGQGDVYEDFNKDEWWKHSERGSEIVKKLPFGENFSDIIRYHHE
CCHHHHHHHHHHHHHHCCCCCCHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHC
NYDGSGHFKLNGDSIPLGAQIVFISDQFDIRYTSLVGKESEYNIRNNIKECIKSGTGKMF
CCCCCCEEEECCCCCCCCEEEEEEECCCCEEHHHHHCCCCCCCHHHHHHHHHHCCCCCHH
NPVVAKALLDLTRQEKFWLDYKFFDIKSLLKRIEPKDTIIIGIKELEDIAEAFAQIIDNR
HHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCC
SRFTYNHSKGISKLTYEMAKVIGYDEETSRKIRIAGLLHDLGKLAVPNSILDKPDKLTEE
CCEEECHHCCHHHHHHHHHHHHCCCCHHCCEEHHHHHHHHHHHHCCCHHHHCCCCCCCHH
EFMVIKSHTYYTKEILKEIDGIDDIAEWAANHHEKLDGSGYPEGLKGDEIGEIDRHVAVC
HEEEEECCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHH
DMYQALTEDRPYRKGLELKQAIDIIAKSVKDNKVSGESLEILKEVVF
HHHHHHHCCCCHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]