| Definition | Brucella suis ATCC 23445 chromosome II, complete genome. |
|---|---|
| Accession | NC_010167 |
| Length | 1,400,844 |
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The map label for this gene is ssuA [C]
Identifier: 163845503
GI number: 163845503
Start: 1381933
End: 1382892
Strand: Reverse
Name: ssuA [C]
Synonym: BSUIS_B1417
Alternate gene names: 163845503
Gene position: 1382892-1381933 (Counterclockwise)
Preceding gene: 163845504
Following gene: 163845502
Centisome position: 98.72
GC content: 55.52
Gene sequence:
>960_bases ATGAAAAGACGCACTTTTCTTGCAATGAGCCTGGCATTAACATTCCTGCCCTCCGTCGCCCTTGCCGACAATATTCCGGT GCGCGTTGGTTATATCGCGGATTATTGGGGCACCAGTATCACCGCGATTGCAAGCGAGAAGGGGCTTTGGGAGAAGCACG GTCTTGATGCGGACACGCGGGTATTCACCAACGGCCCCATTCAGGTGCAGGCACTTGGTGCGGGCAGCCTTGATTTCGGC TATATCGGACCGGGTGCGCTATGGTTGCCGGCAAGCGGCAAGGCCAAGATCGTGGCCATCAATTCGGTGGGTTTTTCAGA CCGGGTGATCGCGCAGGAGGGCTTCAAGTCGATGGCCGACCTGAAGGGCAAGAAGATCGGTGTTCCCGAAGGCACCTCTG GCGATATGCTGCTCCGGCTCGCTCTCGGTAAGGCGGGCATGAAGCTGGATGATGTTCAGGTCATCAAGATGGACCCGTCT ACGGTCGTATCGGCCTTTGCCTCCAAACAAATCGACGCCGCAGGCATCTGGTATCCATTGATCGGCACGATCAAGGAGCA TGTTCCCGGTATGGTGGAACTGGCTGCCAATAGCGACTTCTTTCCGGATAAAACCTTTCCGAGTGCATTCATCGCGCGCA ACGAGATCGTGGCCGAGAACCCGGAGGCGGTGAAGCGGATGATCGCGGTCATCGAGGAAGCCGAGGACTTCCGCACCGCC AACCCGGAACAGTCCGTCGATATTACGGCAAAATTTCTCAAGGTCGATAAGGTCAATCTGGAAACGGAAGCCAAAAACGG AAAGTCGCTGACGAGTGAGGAACTGGTGAAGCTCACCCGTGATGGATCGGTCAATGGATGGCTGTCGGGCATGGCCGATA TGTTCGTAACCTTCGGCAAGCTGAAAAGCCCGCTCGACCCGAAAGACTATTATCTGGCCGATTATTTCACGGCAAAATAA
Upstream 100 bases:
>100_bases ATTTGCAGCCATCCGCAACCGCGTCTGGCATGCTGTCTACCATCAGCAGCCCCAAACAGACCAGCAATCTTCACACGGTC AAGAATGAGGAGATGACCAG
Downstream 100 bases:
>100_bases CAATCCGCCGCCTGCGCGAAACGCACCATGCGCAGGCAGCGGAATCAGGAGCGGCTCCTCGTTCAAACCTGGCTCGGAGC CGCTCAGACCCAAGCCCGCG
Product: aliphatic sulfonate ABC transporter substrate-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MKRRTFLAMSLALTFLPSVALADNIPVRVGYIADYWGTSITAIASEKGLWEKHGLDADTRVFTNGPIQVQALGAGSLDFG YIGPGALWLPASGKAKIVAINSVGFSDRVIAQEGFKSMADLKGKKIGVPEGTSGDMLLRLALGKAGMKLDDVQVIKMDPS TVVSAFASKQIDAAGIWYPLIGTIKEHVPGMVELAANSDFFPDKTFPSAFIARNEIVAENPEAVKRMIAVIEEAEDFRTA NPEQSVDITAKFLKVDKVNLETEAKNGKSLTSEELVKLTRDGSVNGWLSGMADMFVTFGKLKSPLDPKDYYLADYFTAK
Sequences:
>Translated_319_residues MKRRTFLAMSLALTFLPSVALADNIPVRVGYIADYWGTSITAIASEKGLWEKHGLDADTRVFTNGPIQVQALGAGSLDFG YIGPGALWLPASGKAKIVAINSVGFSDRVIAQEGFKSMADLKGKKIGVPEGTSGDMLLRLALGKAGMKLDDVQVIKMDPS TVVSAFASKQIDAAGIWYPLIGTIKEHVPGMVELAANSDFFPDKTFPSAFIARNEIVAENPEAVKRMIAVIEEAEDFRTA NPEQSVDITAKFLKVDKVNLETEAKNGKSLTSEELVKLTRDGSVNGWLSGMADMFVTFGKLKSPLDPKDYYLADYFTAK >Mature_319_residues MKRRTFLAMSLALTFLPSVALADNIPVRVGYIADYWGTSITAIASEKGLWEKHGLDADTRVFTNGPIQVQALGAGSLDFG YIGPGALWLPASGKAKIVAINSVGFSDRVIAQEGFKSMADLKGKKIGVPEGTSGDMLLRLALGKAGMKLDDVQVIKMDPS TVVSAFASKQIDAAGIWYPLIGTIKEHVPGMVELAANSDFFPDKTFPSAFIARNEIVAENPEAVKRMIAVIEEAEDFRTA NPEQSVDITAKFLKVDKVNLETEAKNGKSLTSEELVKLTRDGSVNGWLSGMADMFVTFGKLKSPLDPKDYYLADYFTAK
Specific function: Probably part of an ABC transporter complex [H]
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein ssuA/tauA family [H]
Homologues:
Organism=Escherichia coli, GI87081803, Length=258, Percent_Identity=27.5193798449612, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI87081727, Length=326, Percent_Identity=23.0061349693252, Blast_Score=64, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010067 - InterPro: IPR015168 [H]
Pfam domain/function: PF09084 NMT1 [H]
EC number: NA
Molecular weight: Translated: 34478; Mature: 34478
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRRTFLAMSLALTFLPSVALADNIPVRVGYIADYWGTSITAIASEKGLWEKHGLDADTR CCCHHHHHHHHHHHHHCCHHHCCCCCEEEEEEEHHCCCEEEEEECCCCCHHHHCCCCCCE VFTNGPIQVQALGAGSLDFGYIGPGALWLPASGKAKIVAINSVGFSDRVIAQEGFKSMAD EEECCCEEEEEECCCCCCCCEECCCCEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHH LKGKKIGVPEGTSGDMLLRLALGKAGMKLDDVQVIKMDPSTVVSAFASKQIDAAGIWYPL CCCCEECCCCCCCCCEEEEEECCCCCCEECCEEEEEECHHHHHHHHHHCCCCCCCCHHHH IGTIKEHVPGMVELAANSDFFPDKTFPSAFIARNEIVAENPEAVKRMIAVIEEAEDFRTA HHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCC NPEQSVDITAKFLKVDKVNLETEAKNGKSLTSEELVKLTRDGSVNGWLSGMADMFVTFGK CCCCCCEEEEEEEEEEEECCEECCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHH LKSPLDPKDYYLADYFTAK HCCCCCCCCEEEEEEEECC >Mature Secondary Structure MKRRTFLAMSLALTFLPSVALADNIPVRVGYIADYWGTSITAIASEKGLWEKHGLDADTR CCCHHHHHHHHHHHHHCCHHHCCCCCEEEEEEEHHCCCEEEEEECCCCCHHHHCCCCCCE VFTNGPIQVQALGAGSLDFGYIGPGALWLPASGKAKIVAINSVGFSDRVIAQEGFKSMAD EEECCCEEEEEECCCCCCCCEECCCCEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHH LKGKKIGVPEGTSGDMLLRLALGKAGMKLDDVQVIKMDPSTVVSAFASKQIDAAGIWYPL CCCCEECCCCCCCCCEEEEEECCCCCCEECCEEEEEECHHHHHHHHHHCCCCCCCCHHHH IGTIKEHVPGMVELAANSDFFPDKTFPSAFIARNEIVAENPEAVKRMIAVIEEAEDFRTA HHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCC NPEQSVDITAKFLKVDKVNLETEAKNGKSLTSEELVKLTRDGSVNGWLSGMADMFVTFGK CCCCCCEEEEEEEEEEEECCEECCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHH LKSPLDPKDYYLADYFTAK HCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11756688 [H]