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The map label for this gene is dgdA [H]

Identifier: 163845481

GI number: 163845481

Start: 1357705

End: 1358988

Strand: Reverse

Name: dgdA [H]

Synonym: BSUIS_B1395

Alternate gene names: 163845481

Gene position: 1358988-1357705 (Counterclockwise)

Preceding gene: 163845482

Following gene: 163845480

Centisome position: 97.01

GC content: 59.81

Gene sequence:

>1284_bases
ATGAGCGGAAATCAGGAACTGATTGCCCGCAGGGAGCGGCTGCTTGGCCGCAACATGTCCCTATTTTATCAGGACCCGGT
GCATCTGGTGAAGGGTGAGGGTGTCTGGCTCTGGGATGCGGACGGGCGCAAATATCTCGATTGCTATAACAATGTGCCGC
ATGTGGGCCATTGCCATCCGCGTGCGGTGGAGGCGATCTGCCGTCAGGCTTCGACCCTCAACACCCATACGCGCTATCTG
CATGAAGGAATTCTGGATTATGTCGAACGGCTGACCGCGACTTTCGACAAAAGCCTCGATGCGGCAATTCTCACCTGCAC
CGGCAGCGAGGCGAATGACGTGGCCCTGCGCATGGCGCAGGCGGTAACGGGCAAGACCGGCATCATCGCAACCGACTTCA
CCGATCACGGCAATACGACGGCGGTTTCGCAGCTTTCGACGCGAATGCCGCCGGTGGGCGGCTATGGCGGTCATGTGCGC
CATGTGCCGGCACCCGACAGCTATCGCCCGCTTGGCGGTAAGGGGGGCGAAGCCTTCGCGCAAGCGTGGGCGGCGGAGGT
GGAAAAGGCCATCGCTTCGTTGCAGGAAAGCCCGTTCGGCTTTTCCGGCCTTATCATCGATCCGTTCTTTGCCAATGAAG
GTTTCCCCGATCTGCCGGAAAATTTTCTGGCTCCCGCCGTCGCTGCGGTCAGAAAGGCGGGCGGTGTGGTGATTGCCGAC
GAGGTGCAGCCGGGTTTCGGACGCACGGGCGGGCATATGTGGGGGCACCAGAAGGCGGGCATCGTGCCGGATATCGTGAC
ACTCGGCAAACCGATGGGCAATGGCCATCCGGTTGGCGCGGTGGTTGCCGGTGCGGATACGCTGAATGCGTTCCGCAAGG
CTTTCCGCTATTTCAACACTTTTGGCGGCAATCCGGTTTCCTGTGCTGCGGCAATGGCTGTGCTCGACGTGCTGGAGGAG
GAAAAACTACAGGCCAATGCGTTGGAAGTCGGCGCTTATGCACGTCAGGGGCTGGAAAAACTGGCCCAGAAACATGGTAT
GATCGGCAATGTTCGCGGCAGCGGGCTGTTTTTCGGTGCGGAACTTGTTCTCGATCGGGCGGAAAAAACTCCGGCGGCAG
AGATGGCCACGCGGGTTGTGAACGAAATGCGCGAACGCGGCGTGCTGATGAACAAGCTCGGCATCCACCAGAACGCCACC
AAGATCAGGCCGCCCATGCCGTTTTCCAGAGAGAATGCAGATCTCATGCTTTCCACGCTGGATGATGTTCTGGGCGGATT
GTGA

Upstream 100 bases:

>100_bases
AATGTCATCATTTCGCCGCCGCGTGTCATCACGCCAGCCGATGTGAACCGCATTGTTTCTGCGCTCGATGCTGGCCTTTC
CGCCGCGAAGGGACAATGAC

Downstream 100 bases:

>100_bases
CGCGATGGAAAAGTGTCTCGACCATCTGACACAGCGCGTCTCTGCCGCTCTTGCCTTCTGGGGTTTGCCGGAACAGATGC
CGGAACTTCTGAAATATCGT

Product: hypothetical protein

Products: NA

Alternate protein names: DGD [H]

Number of amino acids: Translated: 427; Mature: 426

Protein sequence:

>427_residues
MSGNQELIARRERLLGRNMSLFYQDPVHLVKGEGVWLWDADGRKYLDCYNNVPHVGHCHPRAVEAICRQASTLNTHTRYL
HEGILDYVERLTATFDKSLDAAILTCTGSEANDVALRMAQAVTGKTGIIATDFTDHGNTTAVSQLSTRMPPVGGYGGHVR
HVPAPDSYRPLGGKGGEAFAQAWAAEVEKAIASLQESPFGFSGLIIDPFFANEGFPDLPENFLAPAVAAVRKAGGVVIAD
EVQPGFGRTGGHMWGHQKAGIVPDIVTLGKPMGNGHPVGAVVAGADTLNAFRKAFRYFNTFGGNPVSCAAAMAVLDVLEE
EKLQANALEVGAYARQGLEKLAQKHGMIGNVRGSGLFFGAELVLDRAEKTPAAEMATRVVNEMRERGVLMNKLGIHQNAT
KIRPPMPFSRENADLMLSTLDDVLGGL

Sequences:

>Translated_427_residues
MSGNQELIARRERLLGRNMSLFYQDPVHLVKGEGVWLWDADGRKYLDCYNNVPHVGHCHPRAVEAICRQASTLNTHTRYL
HEGILDYVERLTATFDKSLDAAILTCTGSEANDVALRMAQAVTGKTGIIATDFTDHGNTTAVSQLSTRMPPVGGYGGHVR
HVPAPDSYRPLGGKGGEAFAQAWAAEVEKAIASLQESPFGFSGLIIDPFFANEGFPDLPENFLAPAVAAVRKAGGVVIAD
EVQPGFGRTGGHMWGHQKAGIVPDIVTLGKPMGNGHPVGAVVAGADTLNAFRKAFRYFNTFGGNPVSCAAAMAVLDVLEE
EKLQANALEVGAYARQGLEKLAQKHGMIGNVRGSGLFFGAELVLDRAEKTPAAEMATRVVNEMRERGVLMNKLGIHQNAT
KIRPPMPFSRENADLMLSTLDDVLGGL
>Mature_426_residues
SGNQELIARRERLLGRNMSLFYQDPVHLVKGEGVWLWDADGRKYLDCYNNVPHVGHCHPRAVEAICRQASTLNTHTRYLH
EGILDYVERLTATFDKSLDAAILTCTGSEANDVALRMAQAVTGKTGIIATDFTDHGNTTAVSQLSTRMPPVGGYGGHVRH
VPAPDSYRPLGGKGGEAFAQAWAAEVEKAIASLQESPFGFSGLIIDPFFANEGFPDLPENFLAPAVAAVRKAGGVVIADE
VQPGFGRTGGHMWGHQKAGIVPDIVTLGKPMGNGHPVGAVVAGADTLNAFRKAFRYFNTFGGNPVSCAAAMAVLDVLEEE
KLQANALEVGAYARQGLEKLAQKHGMIGNVRGSGLFFGAELVLDRAEKTPAAEMATRVVNEMRERGVLMNKLGIHQNATK
IRPPMPFSRENADLMLSTLDDVLGGL

Specific function: The dialkylglycine decarboxylase is of interest because it normally catalyzes both decarboxylation and amino transfer. It may be more properly described as a decarboxylating aminotransferase rather than an aminotransferring decarboxylase [H]

COG id: COG0160

COG function: function code E; 4-aminobutyrate aminotransferase and related aminotransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI37574042, Length=436, Percent_Identity=41.2844036697248, Blast_Score=341, Evalue=9e-94,
Organism=Homo sapiens, GI24119277, Length=433, Percent_Identity=41.3394919168591, Blast_Score=330, Evalue=1e-90,
Organism=Homo sapiens, GI226442705, Length=436, Percent_Identity=39.9082568807339, Blast_Score=318, Evalue=6e-87,
Organism=Homo sapiens, GI226442709, Length=381, Percent_Identity=42.7821522309711, Blast_Score=298, Evalue=4e-81,
Organism=Homo sapiens, GI13994255, Length=446, Percent_Identity=32.5112107623318, Blast_Score=230, Evalue=2e-60,
Organism=Homo sapiens, GI4557809, Length=411, Percent_Identity=28.2238442822384, Blast_Score=124, Evalue=2e-28,
Organism=Homo sapiens, GI188536080, Length=445, Percent_Identity=23.5955056179775, Blast_Score=83, Evalue=5e-16,
Organism=Homo sapiens, GI38679950, Length=445, Percent_Identity=23.5955056179775, Blast_Score=83, Evalue=5e-16,
Organism=Homo sapiens, GI38679946, Length=445, Percent_Identity=23.5955056179775, Blast_Score=83, Evalue=5e-16,
Organism=Homo sapiens, GI284507298, Length=190, Percent_Identity=32.1052631578947, Blast_Score=82, Evalue=1e-15,
Organism=Escherichia coli, GI1789016, Length=445, Percent_Identity=29.2134831460674, Blast_Score=171, Evalue=7e-44,
Organism=Escherichia coli, GI145693181, Length=407, Percent_Identity=27.027027027027, Blast_Score=129, Evalue=3e-31,
Organism=Escherichia coli, GI1787560, Length=439, Percent_Identity=27.5626423690205, Blast_Score=119, Evalue=3e-28,
Organism=Escherichia coli, GI1788044, Length=412, Percent_Identity=26.9417475728155, Blast_Score=118, Evalue=9e-28,
Organism=Escherichia coli, GI1789759, Length=350, Percent_Identity=27.7142857142857, Blast_Score=114, Evalue=1e-26,
Organism=Escherichia coli, GI1786349, Length=350, Percent_Identity=27.4285714285714, Blast_Score=86, Evalue=5e-18,
Organism=Escherichia coli, GI1786991, Length=356, Percent_Identity=28.0898876404494, Blast_Score=63, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI71992977, Length=441, Percent_Identity=34.9206349206349, Blast_Score=270, Evalue=9e-73,
Organism=Caenorhabditis elegans, GI32564660, Length=431, Percent_Identity=34.1067285382831, Blast_Score=238, Evalue=5e-63,
Organism=Caenorhabditis elegans, GI25144271, Length=435, Percent_Identity=28.2758620689655, Blast_Score=142, Evalue=3e-34,
Organism=Caenorhabditis elegans, GI71992985, Length=144, Percent_Identity=34.7222222222222, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI25144274, Length=197, Percent_Identity=30.9644670050761, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17541228, Length=447, Percent_Identity=23.2662192393736, Blast_Score=73, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI71981843, Length=121, Percent_Identity=33.8842975206612, Blast_Score=68, Evalue=8e-12,
Organism=Saccharomyces cerevisiae, GI6323470, Length=415, Percent_Identity=28.433734939759, Blast_Score=140, Evalue=3e-34,
Organism=Saccharomyces cerevisiae, GI6324432, Length=382, Percent_Identity=27.7486910994764, Blast_Score=117, Evalue=5e-27,
Organism=Saccharomyces cerevisiae, GI6321456, Length=428, Percent_Identity=22.8971962616822, Blast_Score=68, Evalue=3e-12,
Organism=Drosophila melanogaster, GI21356575, Length=435, Percent_Identity=41.1494252873563, Blast_Score=311, Evalue=4e-85,
Organism=Drosophila melanogaster, GI161085790, Length=446, Percent_Identity=35.2017937219731, Blast_Score=265, Evalue=5e-71,
Organism=Drosophila melanogaster, GI28574759, Length=442, Percent_Identity=35.2941176470588, Blast_Score=261, Evalue=8e-70,
Organism=Drosophila melanogaster, GI21357415, Length=429, Percent_Identity=29.3706293706294, Blast_Score=134, Evalue=8e-32,
Organism=Drosophila melanogaster, GI281366494, Length=251, Percent_Identity=25.0996015936255, Blast_Score=72, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24667139, Length=251, Percent_Identity=25.0996015936255, Blast_Score=72, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24667143, Length=251, Percent_Identity=25.0996015936255, Blast_Score=72, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005814
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00202 Aminotran_3 [H]

EC number: =4.1.1.64 [H]

Molecular weight: Translated: 45855; Mature: 45724

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: PS00600 AA_TRANSFER_CLASS_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGNQELIARRERLLGRNMSLFYQDPVHLVKGEGVWLWDADGRKYLDCYNNVPHVGHCHP
CCCCHHHHHHHHHHHCCCCCEEEECCEEEEECCEEEEECCCCCHHHHHHCCCCCCCCCCH
RAVEAICRQASTLNTHTRYLHEGILDYVERLTATFDKSLDAAILTCTGSEANDVALRMAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHH
AVTGKTGIIATDFTDHGNTTAVSQLSTRMPPVGGYGGHVRHVPAPDSYRPLGGKGGEAFA
HHCCCCCEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHH
QAWAAEVEKAIASLQESPFGFSGLIIDPFFANEGFPDLPENFLAPAVAAVRKAGGVVIAD
HHHHHHHHHHHHHHHCCCCCCCCEEECHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEC
EVQPGFGRTGGHMWGHQKAGIVPDIVTLGKPMGNGHPVGAVVAGADTLNAFRKAFRYFNT
CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHH
FGGNPVSCAAAMAVLDVLEEEKLQANALEVGAYARQGLEKLAQKHGMIGNVRGSGLFFGA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCEEEHH
ELVLDRAEKTPAAEMATRVVNEMRERGVLMNKLGIHQNATKIRPPMPFSRENADLMLSTL
HHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHH
DDVLGGL
HHHHCCC
>Mature Secondary Structure 
SGNQELIARRERLLGRNMSLFYQDPVHLVKGEGVWLWDADGRKYLDCYNNVPHVGHCHP
CCCHHHHHHHHHHHCCCCCEEEECCEEEEECCEEEEECCCCCHHHHHHCCCCCCCCCCH
RAVEAICRQASTLNTHTRYLHEGILDYVERLTATFDKSLDAAILTCTGSEANDVALRMAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHH
AVTGKTGIIATDFTDHGNTTAVSQLSTRMPPVGGYGGHVRHVPAPDSYRPLGGKGGEAFA
HHCCCCCEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHH
QAWAAEVEKAIASLQESPFGFSGLIIDPFFANEGFPDLPENFLAPAVAAVRKAGGVVIAD
HHHHHHHHHHHHHHHCCCCCCCCEEECHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEC
EVQPGFGRTGGHMWGHQKAGIVPDIVTLGKPMGNGHPVGAVVAGADTLNAFRKAFRYFNT
CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHH
FGGNPVSCAAAMAVLDVLEEEKLQANALEVGAYARQGLEKLAQKHGMIGNVRGSGLFFGA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCEEEHH
ELVLDRAEKTPAAEMATRVVNEMRERGVLMNKLGIHQNATKIRPPMPFSRENADLMLSTL
HHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHH
DDVLGGL
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2180928; 8342040; 7947767; 7799433; 10556038 [H]