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The map label for this gene is rbsC [H]

Identifier: 163845109

GI number: 163845109

Start: 969193

End: 970152

Strand: Reverse

Name: rbsC [H]

Synonym: BSUIS_B0989

Alternate gene names: 163845109

Gene position: 970152-969193 (Counterclockwise)

Preceding gene: 163845110

Following gene: 163845108

Centisome position: 69.25

GC content: 56.98

Gene sequence:

>960_bases
ATGCAACAGGATATGGCCGGAAATCTCTATATCGCCGTTCAACGCCGCCGAAACAGGGGGCTGATCGGGCTTTATGCCGT
CGTCGGCATTTTTGTTCTGCTCTATGCCTGGTTATTTCCGGGAATTCTGAGCGTTAGCGGCTTTTCCAAGTTTACGCAAA
ACTGGTTTCCGCTGGCGCTGGTGACAATGGCGCAGGCGCTGTTGATGCTGAATGGCGGCATTACGCTTGCCATCGGTCCG
CTGGTAAGCCTGGGTGCGGTCATCGCTGCAACCACGATGGGCAGTGCTTTTGGCGTTTTCGGCGGTGTCGCTGCTGTTAT
TCTGAGTGGCTTTGTCATCGGTGCGCTGACGGGCTCCATCGTTGCGTTCATGCGCCTTCCGGCCATCATCGTGACATTGG
CGGGTTCCTTCATCATCACCGGAATAGCCCTGCTTATCCTGCCCCGGCCGGGCGGTTACATTCCCGGCTGGCTCTCCGAT
TTTCTGGCAGGCCATTCGCCTTCGGCCTTTATTATTCTGGTGCTTGTCATACTGGGCTGGAAACTATTCCTTGCCACCCC
GATGGGGCTTGGCATCTATGCCGCCGGTGAAAATCCGGTCGGAGCCTATCGCTCCGGTGTTCCGGTCGAGAAGGTCAAGG
TCATCTCCTTTGCCCTGTCGGGCGTTCTGGCCACCTGTGCGGGGCTGTTCGTGGCCGCGCAAACAGGATCGGGCGATCCG
GTTATCGGCACGCCCTTCACGCTTAATTCCATTGCAGCGGCTGTATTGGGCGGCGTCGGCTTTCTTGGCGGAAAAGGCAC
GATGCGCGGTGCCATCTGCGGCAGCCTTCTTCTCTCCGTGATGATTAACGTTATGTTCTTCTTGGGCTTTCCTCCTGTGG
CGCAATATATCGCCCAAGGGCTGATTATTGTTGGTGCGGTGGCCTTGCCAGAATTTGCAGGCAAATGGAGGAGGTCATGA

Upstream 100 bases:

>100_bases
GCGAGGGCCGCATGGTCGCGACCCTGAAACACGGGGATCTGTCGGAAGAGGCAATTGTAGGGGCTGCCATGGGCCTGAAA
TCGTCGAGAAAGGCAGCCTG

Downstream 100 bases:

>100_bases
ATTCGCTTCCGCTGACCGGGCGTCGTCTGTTGCAAAGCCCGCCTCTCCTCACCTTGCTTCTGGTTGCGCTGGTCTGGCTT
GTCGCCAGCCTGACATTGCG

Product: hypothetical protein

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MQQDMAGNLYIAVQRRRNRGLIGLYAVVGIFVLLYAWLFPGILSVSGFSKFTQNWFPLALVTMAQALLMLNGGITLAIGP
LVSLGAVIAATTMGSAFGVFGGVAAVILSGFVIGALTGSIVAFMRLPAIIVTLAGSFIITGIALLILPRPGGYIPGWLSD
FLAGHSPSAFIILVLVILGWKLFLATPMGLGIYAAGENPVGAYRSGVPVEKVKVISFALSGVLATCAGLFVAAQTGSGDP
VIGTPFTLNSIAAAVLGGVGFLGGKGTMRGAICGSLLLSVMINVMFFLGFPPVAQYIAQGLIIVGAVALPEFAGKWRRS

Sequences:

>Translated_319_residues
MQQDMAGNLYIAVQRRRNRGLIGLYAVVGIFVLLYAWLFPGILSVSGFSKFTQNWFPLALVTMAQALLMLNGGITLAIGP
LVSLGAVIAATTMGSAFGVFGGVAAVILSGFVIGALTGSIVAFMRLPAIIVTLAGSFIITGIALLILPRPGGYIPGWLSD
FLAGHSPSAFIILVLVILGWKLFLATPMGLGIYAAGENPVGAYRSGVPVEKVKVISFALSGVLATCAGLFVAAQTGSGDP
VIGTPFTLNSIAAAVLGGVGFLGGKGTMRGAICGSLLLSVMINVMFFLGFPPVAQYIAQGLIIVGAVALPEFAGKWRRS
>Mature_319_residues
MQQDMAGNLYIAVQRRRNRGLIGLYAVVGIFVLLYAWLFPGILSVSGFSKFTQNWFPLALVTMAQALLMLNGGITLAIGP
LVSLGAVIAATTMGSAFGVFGGVAAVILSGFVIGALTGSIVAFMRLPAIIVTLAGSFIITGIALLILPRPGGYIPGWLSD
FLAGHSPSAFIILVLVILGWKLFLATPMGLGIYAAGENPVGAYRSGVPVEKVKVISFALSGVLATCAGLFVAAQTGSGDP
VIGTPFTLNSIAAAVLGGVGFLGGKGTMRGAICGSLLLSVMINVMFFLGFPPVAQYIAQGLIIVGAVALPEFAGKWRRS

Specific function: Part of the binding-protein-dependent transport system for ribose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1172

COG function: function code G; Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790191, Length=304, Percent_Identity=30.9210526315789, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1788896, Length=315, Percent_Identity=28.5714285714286, Blast_Score=98, Evalue=7e-22,
Organism=Escherichia coli, GI145693152, Length=256, Percent_Identity=30.46875, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1790524, Length=269, Percent_Identity=32.3420074349442, Blast_Score=84, Evalue=9e-18,
Organism=Escherichia coli, GI1789992, Length=140, Percent_Identity=37.8571428571429, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI87082395, Length=275, Percent_Identity=31.6363636363636, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1788471, Length=277, Percent_Identity=33.9350180505415, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI1787793, Length=271, Percent_Identity=28.7822878228782, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 32853; Mature: 32853

Theoretical pI: Translated: 10.49; Mature: 10.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQDMAGNLYIAVQRRRNRGLIGLYAVVGIFVLLYAWLFPGILSVSGFSKFTQNWFPLAL
CCCCCCCCEEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
VTMAQALLMLNGGITLAIGPLVSLGAVIAATTMGSAFGVFGGVAAVILSGFVIGALTGSI
HHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAFMRLPAIIVTLAGSFIITGIALLILPRPGGYIPGWLSDFLAGHSPSAFIILVLVILGW
HHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHH
KLFLATPMGLGIYAAGENPVGAYRSGVPVEKVKVISFALSGVLATCAGLFVAAQTGSGDP
HHHHHCCCCCEEEECCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCC
VIGTPFTLNSIAAAVLGGVGFLGGKGTMRGAICGSLLLSVMINVMFFLGFPPVAQYIAQG
CCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
LIIVGAVALPEFAGKWRRS
HHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQQDMAGNLYIAVQRRRNRGLIGLYAVVGIFVLLYAWLFPGILSVSGFSKFTQNWFPLAL
CCCCCCCCEEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
VTMAQALLMLNGGITLAIGPLVSLGAVIAATTMGSAFGVFGGVAAVILSGFVIGALTGSI
HHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAFMRLPAIIVTLAGSFIITGIALLILPRPGGYIPGWLSDFLAGHSPSAFIILVLVILGW
HHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHH
KLFLATPMGLGIYAAGENPVGAYRSGVPVEKVKVISFALSGVLATCAGLFVAAQTGSGDP
HHHHHCCCCCEEEECCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCC
VIGTPFTLNSIAAAVLGGVGFLGGKGTMRGAICGSLLLSVMINVMFFLGFPPVAQYIAQG
CCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
LIIVGAVALPEFAGKWRRS
HHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]