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The map label for this gene is rbsC [H]

Identifier: 163845108

GI number: 163845108

Start: 968243

End: 969196

Strand: Reverse

Name: rbsC [H]

Synonym: BSUIS_B0988

Alternate gene names: 163845108

Gene position: 969196-968243 (Counterclockwise)

Preceding gene: 163845109

Following gene: 163845107

Centisome position: 69.19

GC content: 61.32

Gene sequence:

>954_bases
ATGAATTCGCTTCCGCTGACCGGGCGTCGTCTGTTGCAAAGCCCGCCTCTCCTCACCTTGCTTCTGGTTGCGCTGGTCTG
GCTTGTCGCCAGCCTGACATTGCGTGGCTTCGGGGCTTATGGTCATCTGCGCTATCTTCTGGAGCTGGCGGCTGTCATCG
GCATCGTCGCTGCCGGGCAAACGCTGGTCATCATTGTCGGGGGGATCGACCTTTCGGTCGGTGCGGTCATGACCGTTACG
GCCATCCTGCTGCCGGTGATCTCACCCGACTGGGACCCGACGGGCCTGCTTGGCGTCGTCATGGTTTTGGCTATTGCGGC
GATCATCGGGGCGGTGAACGGGATTGGCGCGGCGTGGCTGCGCGTGCCGCCCATCATCATGACACTGGCCATGGCAACCT
TCCTTCAGGGCCTGCTGGTCATCGTGGCAGGCGGCAGTGCGGTATCAGTCAACAATGCGGCGGCAATTTTCCTAGGTTCG
GCTCGTCCCTTCGGTATTCCGGCCAGCATCATTTTGTGGGTGGCGGTCACCGCTGTCGTGCTGGTTCTGCTGCATAAGAT
GCCGACGGGCGCACGCTTTCTGGCGCTGGGTGCCAACCCTGTCGCGACACGGCTGTCCGGGGTCAACGTCAATCGCAATA
TGGTCGCACTCTATGCGCTATCGGCTTTCTTTGCCGGTCTTGCCGGCATTGTGCTTCTCGGCATGAACCGGCAGGGCTAT
GTCGGCATTGGCGAGCCCTATGTTCTTTTGTCGATTGCGGCGGTGGTGCTTGGCGGCACTTCCATTCTCGGCGGGCGCGG
CACGTATGCCGGGACGATACCGGGTGCCATTCTCCTTGTGACGACGACCGCGCTTATCACGATGGTCAATGCATCGCCGG
GTCTGCGCTCCATCCTGTTCGGTTCGCTCATTCTCGGATTGCTGATGATTTCCGGGCGGGAGGCGCGTCGATAA

Upstream 100 bases:

>100_bases
TCTTCTTGGGCTTTCCTCCTGTGGCGCAATATATCGCCCAAGGGCTGATTATTGTTGGTGCGGTGGCCTTGCCAGAATTT
GCAGGCAAATGGAGGAGGTC

Downstream 100 bases:

>100_bases
TGCGTCTTTATAGCGGGCCGGTCATCGAGCCGTATCCATCAAACACGCCCCAAAACATAACAAGGAATGCAAGTATGATT
ATGCGCTATCAAAAAGGTTC

Product: hypothetical protein

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MNSLPLTGRRLLQSPPLLTLLLVALVWLVASLTLRGFGAYGHLRYLLELAAVIGIVAAGQTLVIIVGGIDLSVGAVMTVT
AILLPVISPDWDPTGLLGVVMVLAIAAIIGAVNGIGAAWLRVPPIIMTLAMATFLQGLLVIVAGGSAVSVNNAAAIFLGS
ARPFGIPASIILWVAVTAVVLVLLHKMPTGARFLALGANPVATRLSGVNVNRNMVALYALSAFFAGLAGIVLLGMNRQGY
VGIGEPYVLLSIAAVVLGGTSILGGRGTYAGTIPGAILLVTTTALITMVNASPGLRSILFGSLILGLLMISGREARR

Sequences:

>Translated_317_residues
MNSLPLTGRRLLQSPPLLTLLLVALVWLVASLTLRGFGAYGHLRYLLELAAVIGIVAAGQTLVIIVGGIDLSVGAVMTVT
AILLPVISPDWDPTGLLGVVMVLAIAAIIGAVNGIGAAWLRVPPIIMTLAMATFLQGLLVIVAGGSAVSVNNAAAIFLGS
ARPFGIPASIILWVAVTAVVLVLLHKMPTGARFLALGANPVATRLSGVNVNRNMVALYALSAFFAGLAGIVLLGMNRQGY
VGIGEPYVLLSIAAVVLGGTSILGGRGTYAGTIPGAILLVTTTALITMVNASPGLRSILFGSLILGLLMISGREARR
>Mature_317_residues
MNSLPLTGRRLLQSPPLLTLLLVALVWLVASLTLRGFGAYGHLRYLLELAAVIGIVAAGQTLVIIVGGIDLSVGAVMTVT
AILLPVISPDWDPTGLLGVVMVLAIAAIIGAVNGIGAAWLRVPPIIMTLAMATFLQGLLVIVAGGSAVSVNNAAAIFLGS
ARPFGIPASIILWVAVTAVVLVLLHKMPTGARFLALGANPVATRLSGVNVNRNMVALYALSAFFAGLAGIVLLGMNRQGY
VGIGEPYVLLSIAAVVLGGTSILGGRGTYAGTIPGAILLVTTTALITMVNASPGLRSILFGSLILGLLMISGREARR

Specific function: Part of the binding-protein-dependent transport system for ribose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1172

COG function: function code G; Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790191, Length=290, Percent_Identity=34.4827586206897, Blast_Score=111, Evalue=8e-26,
Organism=Escherichia coli, GI145693152, Length=304, Percent_Identity=29.9342105263158, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI87082395, Length=267, Percent_Identity=33.3333333333333, Blast_Score=99, Evalue=4e-22,
Organism=Escherichia coli, GI1788896, Length=260, Percent_Identity=29.2307692307692, Blast_Score=89, Evalue=5e-19,
Organism=Escherichia coli, GI1790524, Length=292, Percent_Identity=24.3150684931507, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1787794, Length=227, Percent_Identity=28.6343612334802, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1788471, Length=225, Percent_Identity=32, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1789992, Length=137, Percent_Identity=30.6569343065693, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 32393; Mature: 32393

Theoretical pI: Translated: 11.74; Mature: 11.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSLPLTGRRLLQSPPLLTLLLVALVWLVASLTLRGFGAYGHLRYLLELAAVIGIVAAGQ
CCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC
TLVIIVGGIDLSVGAVMTVTAILLPVISPDWDPTGLLGVVMVLAIAAIIGAVNGIGAAWL
EEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH
RVPPIIMTLAMATFLQGLLVIVAGGSAVSVNNAAAIFLGSARPFGIPASIILWVAVTAVV
HHHHHHHHHHHHHHHHHHHEEEECCCEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHH
LVLLHKMPTGARFLALGANPVATRLSGVNVNRNMVALYALSAFFAGLAGIVLLGMNRQGY
HHHHHCCCCCCEEEEECCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
VGIGEPYVLLSIAAVVLGGTSILGGRGTYAGTIPGAILLVTTTALITMVNASPGLRSILF
EECCCHHHHHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHH
GSLILGLLMISGREARR
HHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNSLPLTGRRLLQSPPLLTLLLVALVWLVASLTLRGFGAYGHLRYLLELAAVIGIVAAGQ
CCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC
TLVIIVGGIDLSVGAVMTVTAILLPVISPDWDPTGLLGVVMVLAIAAIIGAVNGIGAAWL
EEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH
RVPPIIMTLAMATFLQGLLVIVAGGSAVSVNNAAAIFLGSARPFGIPASIILWVAVTAVV
HHHHHHHHHHHHHHHHHHHEEEECCCEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHH
LVLLHKMPTGARFLALGANPVATRLSGVNVNRNMVALYALSAFFAGLAGIVLLGMNRQGY
HHHHHCCCCCCEEEEECCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
VGIGEPYVLLSIAAVVLGGTSILGGRGTYAGTIPGAILLVTTTALITMVNASPGLRSILF
EECCCHHHHHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHH
GSLILGLLMISGREARR
HHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7921236; 9353933; 9384377 [H]