Click here to switch to the map view.

The map label for this gene is ybzH [H]

Identifier: 163845020

GI number: 163845020

Start: 871039

End: 871347

Strand: Reverse

Name: ybzH [H]

Synonym: BSUIS_B0896

Alternate gene names: 163845020

Gene position: 871347-871039 (Counterclockwise)

Preceding gene: 163845022

Following gene: 163845018

Centisome position: 62.2

GC content: 54.69

Gene sequence:

>309_bases
ATGTCTGATGTTCAGCCTATACCTCTGGACGAGATATTGAAAGCACTTGCCAATCCGGTGCGTCTTGACATTTTGAGCTG
GCTGAAGGAGCCGGAGAAACACTTTTCCGGTCAGCACATGCCTCTGGAGATGGGGGTGTGCGCAGGCCAGTTCGAGCGGT
GCGGCCTTTCCCAATCGTCCGTTTCCGCCCATTTGTCCGTGCTGACGAAGGCGGGGTTGATTATGCCTCACCGTGTCGGC
CAATGGACTTTCTACAAGCGCGATGAGGAAGCAATAGCCGCTGCCATCAAAGCCCTGTCTGCTCTTTAA

Upstream 100 bases:

>100_bases
AGGGCCTGCATCTTTATAAATCGGATTGAAGCAATATTTATATCGGGAAATGACGATACGTGCCGGAGGATTAGCCCGGA
ACACTGGCGAGGTGACTGCA

Downstream 100 bases:

>100_bases
CCCGTCCTGAAACCGATCTTTCCCACTTGAAGGAAATGTATCCATGGCCTCATTGTTCGACCCCATTACCATCGGTGATC
TGAAGCTTGCAAACCGTATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 101

Protein sequence:

>102_residues
MSDVQPIPLDEILKALANPVRLDILSWLKEPEKHFSGQHMPLEMGVCAGQFERCGLSQSSVSAHLSVLTKAGLIMPHRVG
QWTFYKRDEEAIAAAIKALSAL

Sequences:

>Translated_102_residues
MSDVQPIPLDEILKALANPVRLDILSWLKEPEKHFSGQHMPLEMGVCAGQFERCGLSQSSVSAHLSVLTKAGLIMPHRVG
QWTFYKRDEEAIAAAIKALSAL
>Mature_101_residues
SDVQPIPLDEILKALANPVRLDILSWLKEPEKHFSGQHMPLEMGVCAGQFERCGLSQSSVSAHLSVLTKAGLIMPHRVGQ
WTFYKRDEEAIAAAIKALSAL

Specific function: Unknown

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 11225; Mature: 11094

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDVQPIPLDEILKALANPVRLDILSWLKEPEKHFSGQHMPLEMGVCAGQFERCGLSQSS
CCCCCCCCHHHHHHHHCCHHHHHHHHHHHCHHHHCCCCCCCHHHCCCCCHHHHCCCCHHH
VSAHLSVLTKAGLIMPHRVGQWTFYKRDEEAIAAAIKALSAL
HHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
SDVQPIPLDEILKALANPVRLDILSWLKEPEKHFSGQHMPLEMGVCAGQFERCGLSQSS
CCCCCCCHHHHHHHHCCHHHHHHHHHHHCHHHHCCCCCCCHHHCCCCCHHHHCCCCHHH
VSAHLSVLTKAGLIMPHRVGQWTFYKRDEEAIAAAIKALSAL
HHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]