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The map label for this gene is sodC

Identifier: 163844832

GI number: 163844832

Start: 669652

End: 670173

Strand: Reverse

Name: sodC

Synonym: BSUIS_B0688

Alternate gene names: 163844832

Gene position: 670173-669652 (Counterclockwise)

Preceding gene: 163844833

Following gene: 163844830

Centisome position: 47.84

GC content: 53.26

Gene sequence:

>522_bases
ATGAAGTCCTTATTTATTGCATCGACAATGGTGCTTATGGCTTTTCCGGCTTTCGCAGAAAGCACGACGGTAAAAATGTA
TGAGGCGCTGCCGACCGGACCGGGTAAAGAAGTTGGCACCGTGGTCATTTCCGAAGCCCCGGGCGGGCTGCACTTCAAGG
TGAATATGGAAAAGCTGACGCCGGGCTATCATGGCTTTCATGTTCACGAAAATCCAAGCTGCGCTCCGGGAGAAAAAGAC
GGCAAGATCGTACCGGCTCTTGCTGCCGGCGGGCATTATGATCCGGGTAATACCCATCACCATTTAGGGCCTGAAGGTGA
TGGACATATGGGCGATTTGCCACGCCTGAGCGCCAATGCTGACGGCAAGGTGAGTGAAACCGTTGTCGCTCCACATCTCA
AGAAATTGGCGGAAATCAAGCAGCGTTCTTTGATGGTCCATGTCGGAGGGGATAATTATTCCGATAAGCCTGAGCCGCTT
GGTGGCGGTGGTGCCCGTTTTGCCTGCGGCGTGATCGAATAA

Upstream 100 bases:

>100_bases
TAATTTAGCAATTGCTGTAACTAATTGTTTTAATACAGTATCCAGGGGGAATAGCCTTACGGTTTCTCTGGAACTGTTCT
AACTATATTCAGGAGAAGTG

Downstream 100 bases:

>100_bases
CCGGCCATGCCCAATTCTAGTGGTCTGATTCCAACATTTGTATCTCTCGGTTCAAGCGTCGAGCAAATGTTGGAATCACA
AAGGCCACTAATAAGTATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MKSLFIASTMVLMAFPAFAESTTVKMYEALPTGPGKEVGTVVISEAPGGLHFKVNMEKLTPGYHGFHVHENPSCAPGEKD
GKIVPALAAGGHYDPGNTHHHLGPEGDGHMGDLPRLSANADGKVSETVVAPHLKKLAEIKQRSLMVHVGGDNYSDKPEPL
GGGGARFACGVIE

Sequences:

>Translated_173_residues
MKSLFIASTMVLMAFPAFAESTTVKMYEALPTGPGKEVGTVVISEAPGGLHFKVNMEKLTPGYHGFHVHENPSCAPGEKD
GKIVPALAAGGHYDPGNTHHHLGPEGDGHMGDLPRLSANADGKVSETVVAPHLKKLAEIKQRSLMVHVGGDNYSDKPEPL
GGGGARFACGVIE
>Mature_173_residues
MKSLFIASTMVLMAFPAFAESTTVKMYEALPTGPGKEVGTVVISEAPGGLHFKVNMEKLTPGYHGFHVHENPSCAPGEKD
GKIVPALAAGGHYDPGNTHHHLGPEGDGHMGDLPRLSANADGKVSETVVAPHLKKLAEIKQRSLMVHVGGDNYSDKPEPL
GGGGARFACGVIE

Specific function: Destroys radicals which are normally produced within the cells and which are toxic to biological systems

COG id: COG2032

COG function: function code P; Cu/Zn superoxide dismutase

Gene ontology:

Cell location: Periplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Cu-Zn superoxide dismutase family

Homologues:

Organism=Escherichia coli, GI1787934, Length=173, Percent_Identity=52.6011560693642, Blast_Score=182, Evalue=1e-47,
Organism=Caenorhabditis elegans, GI17554806, Length=145, Percent_Identity=29.6551724137931, Blast_Score=63, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SODC_BRUME (P66826)

Other databases:

- EMBL:   AE008918
- PIR:   AD3582
- RefSeq:   NP_541559.1
- ProteinModelPortal:   P66826
- SMR:   P66826
- GeneID:   1198353
- GenomeReviews:   AE008918_GR
- KEGG:   bme:BMEII0581
- HOGENOM:   HBG609879
- OMA:   HALMVHA
- PhylomeDB:   P66826
- ProtClustDB:   CLSK898879
- BioCyc:   BMEL224914:BMEII0581-MONOMER
- BRENDA:   1.15.1.1
- InterPro:   IPR018152
- InterPro:   IPR001424
- Gene3D:   G3DSA:2.60.40.200
- PANTHER:   PTHR10003

Pfam domain/function: PF00080 Sod_Cu; SSF49329 SOD_Cu_Zn

EC number: =1.15.1.1

Molecular weight: Translated: 18131; Mature: 18131

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: PS00087 SOD_CU_ZN_1; PS00332 SOD_CU_ZN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLFIASTMVLMAFPAFAESTTVKMYEALPTGPGKEVGTVVISEAPGGLHFKVNMEKLT
CCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCEEEEEEHHHCC
PGYHGFHVHENPSCAPGEKDGKIVPALAAGGHYDPGNTHHHLGPEGDGHMGDLPRLSANA
CCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DGKVSETVVAPHLKKLAEIKQRSLMVHVGGDNYSDKPEPLGGGGARFACGVIE
CCCCCHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCEEEEEECC
>Mature Secondary Structure
MKSLFIASTMVLMAFPAFAESTTVKMYEALPTGPGKEVGTVVISEAPGGLHFKVNMEKLT
CCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCEEEEEEHHHCC
PGYHGFHVHENPSCAPGEKDGKIVPALAAGGHYDPGNTHHHLGPEGDGHMGDLPRLSANA
CCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DGKVSETVVAPHLKKLAEIKQRSLMVHVGGDNYSDKPEPLGGGGARFACGVIE
CCCCCHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11756688