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The map label for this gene is ycjP [C]

Identifier: 163844820

GI number: 163844820

Start: 657218

End: 658099

Strand: Reverse

Name: ycjP [C]

Synonym: BSUIS_B0675

Alternate gene names: 163844820

Gene position: 658099-657218 (Counterclockwise)

Preceding gene: 163844821

Following gene: 163844819

Centisome position: 46.98

GC content: 55.22

Gene sequence:

>882_bases
ATGAGCGTCCAATCGCAAGATAATGCCATCAAGAGCGGAAAGCTCACCCGTGCGCTGATCTATTCCGCGCTCATCTTCTT
CGCATTCTACTATCTGTTGCCGCTCTATGTGATGCTGGTGAACTCGTTCAAGCCCCTGGAGGAAATCCGTCAGGGTGGCA
TGTTGAACCTGCCGCAGCAATGGACCATCGAGCCATGGCTTTCCGCCTGGTCCACGGCGCAGATCGGTGTGCAGCCGACG
GGCCTCAAGCCCTTCTTCATCAATTCGATCCTGATGGTCGTTCCGGCTGTGGCCATTTCGACTATCGTTGGCGCGCTGAA
CGGCTATGTTCTCACCAAATGGCGCTTTCGCGGATCGAATATCTTCTTTGGCCTGCTTTTGCTTTCCTGCTTCATTCCCT
TCCAGATCGTGCTTATTCCGATGGCGCGCGTATTGGGAATTTTGGGGATTGCAGGCACCATCTGGGGGCTGATCCTCGTG
CATGTGGTCTATGGCCTCGGTTTCACGACGCTTTATTTCCGCAATTATTACGAGGCTTTCCCGACCGAGCTGGTGCGCGC
GGCACAGATAGACGGCGCAAGCTTCTTCCAGATTTTCTGGCGCATTCTCCTGCCATCGTCCGGTCCGATCATCGTCGTGT
CGGTCATCTGGCAGTTTACCAATATCTGGAACGACTTTCTGTTTGGTGCTTCCTTCTCCGGCGCGCATTCGACGCCGATG
ACGGTAGCGCTCAACAACCTCGTTTCCTCTTCCACCGGCGTCAAGGAATATAATGTCCATTTCGCAGGCGCCATCCTGGC
AGCCTTGCCGACGCTGATCGTCTATATCGTTTCCGGCCGTTATTTCGTGCGCGGCCTGATGTCTGGTGCCGTCAAGGGCT
AG

Upstream 100 bases:

>100_bases
AGATGGGTATCGGCGCTTCCTCGGCGATCATCATGCTGGCGATGATCTTCTCGATCATCATTCCCTATTTCTATTCGGAA
ATTCGCGGAGGGTCGCGGCC

Downstream 100 bases:

>100_bases
TTCTGGGATAAGTTGAACATGTCATTTTTGAAAATTACCGACCTCTACAAATCCTATGGCAGCGTATCGGTCCTGAAGGA
CATCAATATCGAGATTGATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MSVQSQDNAIKSGKLTRALIYSALIFFAFYYLLPLYVMLVNSFKPLEEIRQGGMLNLPQQWTIEPWLSAWSTAQIGVQPT
GLKPFFINSILMVVPAVAISTIVGALNGYVLTKWRFRGSNIFFGLLLLSCFIPFQIVLIPMARVLGILGIAGTIWGLILV
HVVYGLGFTTLYFRNYYEAFPTELVRAAQIDGASFFQIFWRILLPSSGPIIVVSVIWQFTNIWNDFLFGASFSGAHSTPM
TVALNNLVSSSTGVKEYNVHFAGAILAALPTLIVYIVSGRYFVRGLMSGAVKG

Sequences:

>Translated_293_residues
MSVQSQDNAIKSGKLTRALIYSALIFFAFYYLLPLYVMLVNSFKPLEEIRQGGMLNLPQQWTIEPWLSAWSTAQIGVQPT
GLKPFFINSILMVVPAVAISTIVGALNGYVLTKWRFRGSNIFFGLLLLSCFIPFQIVLIPMARVLGILGIAGTIWGLILV
HVVYGLGFTTLYFRNYYEAFPTELVRAAQIDGASFFQIFWRILLPSSGPIIVVSVIWQFTNIWNDFLFGASFSGAHSTPM
TVALNNLVSSSTGVKEYNVHFAGAILAALPTLIVYIVSGRYFVRGLMSGAVKG
>Mature_292_residues
SVQSQDNAIKSGKLTRALIYSALIFFAFYYLLPLYVMLVNSFKPLEEIRQGGMLNLPQQWTIEPWLSAWSTAQIGVQPTG
LKPFFINSILMVVPAVAISTIVGALNGYVLTKWRFRGSNIFFGLLLLSCFIPFQIVLIPMARVLGILGIAGTIWGLILVH
VVYGLGFTTLYFRNYYEAFPTELVRAAQIDGASFFQIFWRILLPSSGPIIVVSVIWQFTNIWNDFLFGASFSGAHSTPMT
VALNNLVSSSTGVKEYNVHFAGAILAALPTLIVYIVSGRYFVRGLMSGAVKG

Specific function: Probably part of a binding-protein-dependent transport system PH1214/15/16. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=290, Percent_Identity=29.3103448275862, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI1789860, Length=259, Percent_Identity=25.0965250965251, Blast_Score=83, Evalue=3e-17,
Organism=Escherichia coli, GI1787368, Length=147, Percent_Identity=26.530612244898, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32402; Mature: 32271

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVQSQDNAIKSGKLTRALIYSALIFFAFYYLLPLYVMLVNSFKPLEEIRQGGMLNLPQQ
CCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCC
WTIEPWLSAWSTAQIGVQPTGLKPFFINSILMVVPAVAISTIVGALNGYVLTKWRFRGSN
CCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCC
IFFGLLLLSCFIPFQIVLIPMARVLGILGIAGTIWGLILVHVVYGLGFTTLYFRNYYEAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PTELVRAAQIDGASFFQIFWRILLPSSGPIIVVSVIWQFTNIWNDFLFGASFSGAHSTPM
HHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCH
TVALNNLVSSSTGVKEYNVHFAGAILAALPTLIVYIVSGRYFVRGLMSGAVKG
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
SVQSQDNAIKSGKLTRALIYSALIFFAFYYLLPLYVMLVNSFKPLEEIRQGGMLNLPQQ
CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCC
WTIEPWLSAWSTAQIGVQPTGLKPFFINSILMVVPAVAISTIVGALNGYVLTKWRFRGSN
CCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCC
IFFGLLLLSCFIPFQIVLIPMARVLGILGIAGTIWGLILVHVVYGLGFTTLYFRNYYEAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PTELVRAAQIDGASFFQIFWRILLPSSGPIIVVSVIWQFTNIWNDFLFGASFSGAHSTPM
HHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCH
TVALNNLVSSSTGVKEYNVHFAGAILAALPTLIVYIVSGRYFVRGLMSGAVKG
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]