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The map label for this gene is mmgC [H]

Identifier: 163844613

GI number: 163844613

Start: 436016

End: 437143

Strand: Reverse

Name: mmgC [H]

Synonym: BSUIS_B0448

Alternate gene names: 163844613

Gene position: 437143-436016 (Counterclockwise)

Preceding gene: 163844614

Following gene: 163844610

Centisome position: 31.21

GC content: 61.61

Gene sequence:

>1128_bases
ATGCTTCTGACCGATACGCAGGAACAGATCCGCGAAGCCGCCCGCGACTTCGCACAGGAGCGCCTTGCCCCCGGCGCCGC
GGCGCGTGACCGTGAACATGCATTTCCCCGCGCCGAACTGACTGAAATGGGCGCGCTTGGCTTTCTCGGAATGCTGGTGC
CGGAAGAATGGGGCGGCTCCGACCTCGGCATGGTCGCCTATGCTCTGGCGCTGGAAGAGATAGCGGCAGGCGACGGTGCC
TGCTCGACCATCGTATCGGTGCATTCCTCCGTCGGCTGTATGCCGATCTTACGTTTCGGCACGGAAGACCAGAAGCGCCG
CTTCCTGCCCAAAATGGCCTGTGGCGAATGGATCGGCGGCTTTGCCCTCACCGAGCCGCAGGCCGGTTCCGATGCCTCCG
CGCTGAAAACGCGCGCCCGGCTCGACGGCGATCATTATGTGATCGACGGTTCCAAGCAGTTCATCACATCAGGCAAGAAC
GGCAATGTCGTGATCGTTTTTGCCGTTACCGATCCTGCCGCAGGCAAGAAGGGTATTTCCGCCTTCATCGTGCCCACCGA
TACGCCAGGTTATGAGGTGATGTCGGTCGAACACAAGCTCGGCCAGCATTCATCCGACACCTGTGCGCTCGGCTTCACCA
ATATGCGCGCTCCGGTCGAAAACCGGCTGGGCGCTGAAGGCGAAGGCTACAAGATCGCCCTTGCCAATCTGGAAGGCGGA
CGCATCGGCATCGCAGCCCAGGCGGTTGGCATGGCGCGCGCCGCTTTCGAGGCGGCACGCGATTATGCCCGCGAACGCAT
TACCTTCGGCAAGCCGATCATCGAACATCAGGCCGTGGCCTTCCGCCTTGCCGACATGGCAACCCGGATCGAAACCGCCC
GGCAGATGGTGTTACACGCCGCTGCCCTGCGCGAAGCAGGCAAGCCATGCCTTACCGAAGCTTCAATGGCAAAGCTGGTC
GCATCGGAAATGGCCGAACAGGTCTGTTCCGCAGCCATCCAGATTCATGGCGGCTATGGCTATCTGGCCGATTATCCGGT
CGAGCGCATCTATCGCGATGTCCGCGTCTGCCAGATTTATGAAGGCACAAGCGACGTGCAGCGGCTCGTCATCGCGCGCG
GGCTATAA

Upstream 100 bases:

>100_bases
TGCTGGCGGCACTTGAAACACATGGCCTGAAGCGCGGCATCGCGGGCATCTGCCTTGGCGGCGGCGAGGCAACCGCAATG
GGTATCGAAAGGATCATCTG

Downstream 100 bases:

>100_bases
TCAGCCTTCGACCTGATCGAGATAATCGCCATAACCTTCCGCTTCCATCCGGTCTTTCGGCACAAAACGGAGGGACGCGG
AGTTGATGCAATAGCGCAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MLLTDTQEQIREAARDFAQERLAPGAAARDREHAFPRAELTEMGALGFLGMLVPEEWGGSDLGMVAYALALEEIAAGDGA
CSTIVSVHSSVGCMPILRFGTEDQKRRFLPKMACGEWIGGFALTEPQAGSDASALKTRARLDGDHYVIDGSKQFITSGKN
GNVVIVFAVTDPAAGKKGISAFIVPTDTPGYEVMSVEHKLGQHSSDTCALGFTNMRAPVENRLGAEGEGYKIALANLEGG
RIGIAAQAVGMARAAFEAARDYARERITFGKPIIEHQAVAFRLADMATRIETARQMVLHAAALREAGKPCLTEASMAKLV
ASEMAEQVCSAAIQIHGGYGYLADYPVERIYRDVRVCQIYEGTSDVQRLVIARGL

Sequences:

>Translated_375_residues
MLLTDTQEQIREAARDFAQERLAPGAAARDREHAFPRAELTEMGALGFLGMLVPEEWGGSDLGMVAYALALEEIAAGDGA
CSTIVSVHSSVGCMPILRFGTEDQKRRFLPKMACGEWIGGFALTEPQAGSDASALKTRARLDGDHYVIDGSKQFITSGKN
GNVVIVFAVTDPAAGKKGISAFIVPTDTPGYEVMSVEHKLGQHSSDTCALGFTNMRAPVENRLGAEGEGYKIALANLEGG
RIGIAAQAVGMARAAFEAARDYARERITFGKPIIEHQAVAFRLADMATRIETARQMVLHAAALREAGKPCLTEASMAKLV
ASEMAEQVCSAAIQIHGGYGYLADYPVERIYRDVRVCQIYEGTSDVQRLVIARGL
>Mature_375_residues
MLLTDTQEQIREAARDFAQERLAPGAAARDREHAFPRAELTEMGALGFLGMLVPEEWGGSDLGMVAYALALEEIAAGDGA
CSTIVSVHSSVGCMPILRFGTEDQKRRFLPKMACGEWIGGFALTEPQAGSDASALKTRARLDGDHYVIDGSKQFITSGKN
GNVVIVFAVTDPAAGKKGISAFIVPTDTPGYEVMSVEHKLGQHSSDTCALGFTNMRAPVENRLGAEGEGYKIALANLEGG
RIGIAAQAVGMARAAFEAARDYARERITFGKPIIEHQAVAFRLADMATRIETARQMVLHAAALREAGKPCLTEASMAKLV
ASEMAEQVCSAAIQIHGGYGYLADYPVERIYRDVRVCQIYEGTSDVQRLVIARGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=370, Percent_Identity=47.5675675675676, Blast_Score=343, Evalue=2e-94,
Organism=Homo sapiens, GI4501859, Length=371, Percent_Identity=40.9703504043127, Blast_Score=298, Evalue=6e-81,
Organism=Homo sapiens, GI7656849, Length=376, Percent_Identity=39.8936170212766, Blast_Score=272, Evalue=3e-73,
Organism=Homo sapiens, GI4557231, Length=374, Percent_Identity=39.0374331550802, Blast_Score=268, Evalue=4e-72,
Organism=Homo sapiens, GI187960098, Length=374, Percent_Identity=39.0374331550802, Blast_Score=268, Evalue=5e-72,
Organism=Homo sapiens, GI226958412, Length=375, Percent_Identity=37.3333333333333, Blast_Score=255, Evalue=6e-68,
Organism=Homo sapiens, GI21361497, Length=351, Percent_Identity=39.8860398860399, Blast_Score=244, Evalue=7e-65,
Organism=Homo sapiens, GI226958414, Length=334, Percent_Identity=37.4251497005988, Blast_Score=233, Evalue=3e-61,
Organism=Homo sapiens, GI4501857, Length=375, Percent_Identity=34.6666666666667, Blast_Score=220, Evalue=2e-57,
Organism=Homo sapiens, GI76496475, Length=335, Percent_Identity=37.6119402985075, Blast_Score=207, Evalue=1e-53,
Organism=Homo sapiens, GI4557235, Length=335, Percent_Identity=37.6119402985075, Blast_Score=207, Evalue=1e-53,
Organism=Homo sapiens, GI4503943, Length=376, Percent_Identity=30.5851063829787, Blast_Score=172, Evalue=5e-43,
Organism=Homo sapiens, GI7669494, Length=362, Percent_Identity=30.3867403314917, Blast_Score=159, Evalue=3e-39,
Organism=Homo sapiens, GI48976061, Length=333, Percent_Identity=31.8318318318318, Blast_Score=141, Evalue=1e-33,
Organism=Homo sapiens, GI211971008, Length=333, Percent_Identity=31.8318318318318, Blast_Score=140, Evalue=1e-33,
Organism=Homo sapiens, GI38505218, Length=348, Percent_Identity=30.1724137931034, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI218563752, Length=223, Percent_Identity=27.8026905829596, Blast_Score=69, Evalue=6e-12,
Organism=Escherichia coli, GI87081958, Length=378, Percent_Identity=34.1269841269841, Blast_Score=171, Evalue=8e-44,
Organism=Escherichia coli, GI1786223, Length=375, Percent_Identity=29.8666666666667, Blast_Score=158, Evalue=5e-40,
Organism=Escherichia coli, GI87082384, Length=268, Percent_Identity=30.5970149253731, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI87081702, Length=352, Percent_Identity=25.2840909090909, Blast_Score=88, Evalue=9e-19,
Organism=Caenorhabditis elegans, GI17534899, Length=380, Percent_Identity=40, Blast_Score=265, Evalue=2e-71,
Organism=Caenorhabditis elegans, GI17506239, Length=374, Percent_Identity=37.1657754010695, Blast_Score=261, Evalue=6e-70,
Organism=Caenorhabditis elegans, GI17570075, Length=378, Percent_Identity=38.3597883597884, Blast_Score=260, Evalue=8e-70,
Organism=Caenorhabditis elegans, GI17508101, Length=371, Percent_Identity=38.0053908355795, Blast_Score=259, Evalue=2e-69,
Organism=Caenorhabditis elegans, GI17569725, Length=378, Percent_Identity=38.0952380952381, Blast_Score=257, Evalue=7e-69,
Organism=Caenorhabditis elegans, GI17538396, Length=375, Percent_Identity=35.4666666666667, Blast_Score=254, Evalue=6e-68,
Organism=Caenorhabditis elegans, GI17533517, Length=370, Percent_Identity=36.4864864864865, Blast_Score=240, Evalue=7e-64,
Organism=Caenorhabditis elegans, GI71985184, Length=351, Percent_Identity=38.1766381766382, Blast_Score=231, Evalue=6e-61,
Organism=Caenorhabditis elegans, GI71990804, Length=276, Percent_Identity=43.1159420289855, Blast_Score=219, Evalue=2e-57,
Organism=Caenorhabditis elegans, GI17534353, Length=376, Percent_Identity=31.3829787234043, Blast_Score=186, Evalue=2e-47,
Organism=Caenorhabditis elegans, GI32563615, Length=231, Percent_Identity=39.8268398268398, Blast_Score=179, Evalue=3e-45,
Organism=Caenorhabditis elegans, GI71985192, Length=298, Percent_Identity=35.9060402684564, Blast_Score=174, Evalue=8e-44,
Organism=Caenorhabditis elegans, GI17551932, Length=360, Percent_Identity=31.6666666666667, Blast_Score=167, Evalue=6e-42,
Organism=Caenorhabditis elegans, GI17505929, Length=377, Percent_Identity=28.6472148541114, Blast_Score=158, Evalue=5e-39,
Organism=Caenorhabditis elegans, GI71982178, Length=273, Percent_Identity=31.5018315018315, Blast_Score=157, Evalue=7e-39,
Organism=Caenorhabditis elegans, GI17562446, Length=330, Percent_Identity=29.6969696969697, Blast_Score=125, Evalue=3e-29,
Organism=Caenorhabditis elegans, GI17531909, Length=239, Percent_Identity=32.6359832635983, Blast_Score=125, Evalue=4e-29,
Organism=Caenorhabditis elegans, GI86563383, Length=324, Percent_Identity=28.3950617283951, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI86563381, Length=324, Percent_Identity=28.3950617283951, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17531913, Length=174, Percent_Identity=32.7586206896552, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI21356377, Length=370, Percent_Identity=46.2162162162162, Blast_Score=331, Evalue=5e-91,
Organism=Drosophila melanogaster, GI24646207, Length=373, Percent_Identity=44.2359249329759, Blast_Score=313, Evalue=2e-85,
Organism=Drosophila melanogaster, GI24666513, Length=372, Percent_Identity=41.9354838709677, Blast_Score=290, Evalue=1e-78,
Organism=Drosophila melanogaster, GI24660351, Length=378, Percent_Identity=39.6825396825397, Blast_Score=267, Evalue=9e-72,
Organism=Drosophila melanogaster, GI21355753, Length=377, Percent_Identity=36.0742705570292, Blast_Score=234, Evalue=6e-62,
Organism=Drosophila melanogaster, GI281363737, Length=355, Percent_Identity=36.6197183098592, Blast_Score=223, Evalue=1e-58,
Organism=Drosophila melanogaster, GI19920834, Length=380, Percent_Identity=32.6315789473684, Blast_Score=176, Evalue=3e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 40215; Mature: 40215

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: PS00072 ACYL_COA_DH_1 ; PS00073 ACYL_COA_DH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLTDTQEQIREAARDFAQERLAPGAAARDREHAFPRAELTEMGALGFLGMLVPEEWGGS
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHCCCCCCCC
DLGMVAYALALEEIAAGDGACSTIVSVHSSVGCMPILRFGTEDQKRRFLPKMACGEWIGG
CHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHCCCCHHHHHHCHHHHHHHHHCC
FALTEPQAGSDASALKTRARLDGDHYVIDGSKQFITSGKNGNVVIVFAVTDPAAGKKGIS
EEECCCCCCCCHHHHHHHHHCCCCEEEECCCHHEEECCCCCCEEEEEEECCCCCCCCCCE
AFIVPTDTPGYEVMSVEHKLGQHSSDTCALGFTNMRAPVENRLGAEGEGYKIALANLEGG
EEEEECCCCCCEEEEHHHHHCCCCCCCEEEECCCCCCCHHHHCCCCCCCEEEEEEECCCC
RIGIAAQAVGMARAAFEAARDYARERITFGKPIIEHQAVAFRLADMATRIETARQMVLHA
EEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AALREAGKPCLTEASMAKLVASEMAEQVCSAAIQIHGGYGYLADYPVERIYRDVRVCQIY
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHCCCHHHHHHHHHHEEEE
EGTSDVQRLVIARGL
CCHHHHHHHHHHCCC
>Mature Secondary Structure
MLLTDTQEQIREAARDFAQERLAPGAAARDREHAFPRAELTEMGALGFLGMLVPEEWGGS
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHCCCCCCCC
DLGMVAYALALEEIAAGDGACSTIVSVHSSVGCMPILRFGTEDQKRRFLPKMACGEWIGG
CHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHCCCCHHHHHHCHHHHHHHHHCC
FALTEPQAGSDASALKTRARLDGDHYVIDGSKQFITSGKNGNVVIVFAVTDPAAGKKGIS
EEECCCCCCCCHHHHHHHHHCCCCEEEECCCHHEEECCCCCCEEEEEEECCCCCCCCCCE
AFIVPTDTPGYEVMSVEHKLGQHSSDTCALGFTNMRAPVENRLGAEGEGYKIALANLEGG
EEEEECCCCCCEEEEHHHHHCCCCCCCEEEECCCCCCCHHHHCCCCCCCEEEEEEECCCC
RIGIAAQAVGMARAAFEAARDYARERITFGKPIIEHQAVAFRLADMATRIETARQMVLHA
EEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AALREAGKPCLTEASMAKLVASEMAEQVCSAAIQIHGGYGYLADYPVERIYRDVRVCQIY
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHCCCHHHHHHHHHHEEEE
EGTSDVQRLVIARGL
CCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]