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The map label for this gene is yliD [C]

Identifier: 163844578

GI number: 163844578

Start: 391003

End: 391911

Strand: Reverse

Name: yliD [C]

Synonym: BSUIS_B0410

Alternate gene names: 163844578

Gene position: 391911-391003 (Counterclockwise)

Preceding gene: 163844579

Following gene: 163844577

Centisome position: 27.98

GC content: 60.84

Gene sequence:

>909_bases
ATGCGGTCATCGATCCACGCATCAAGGTTACGTAAGATGGGCCAGTCCATTCCCGCTTCCACAGGGCCGATGGCCCGTTC
CGCGAACCGCTTCTTACAGAACCGCGCCGCGATATTCGGCCTTGTCCTGCTGACGCCTCTTCTATTCGCGGTGCTGACCT
ATCCGCTATGGCTGCCCTACAAGCCGAACGATATCGACCTAATGGCGATGAACTCCGCTCCAAGCTGGAAACACTGGTTT
GGAACCGATGGAGTGGGCCGCGACGTATTCGCCCGAACAATGGAAGGCGGGCGCATTTCGCTCCTCGTCGCCGTTTCATC
CGTGGTGCTTTCCACAGCCATCGGCTTCCTGATCGGTGCGATTTCCGCCCTTGGCGGGCGCTGGGCAGATGCGATTGCCA
TGCGGTCGGTCGATCTTGCCATGACGCTGCCGCCGGTCATCTTCCTGCTGGTGCTGGCCTCCATCATCGGTTCGGGCATC
TGGTCCACGGTGGTTGTGATTGCACTCCTTTTATGGCCCGTGCTTTCACGCATGATCCGTGCACGCCTTCTGGAGCTGCG
CGAACGCGAATTCGTCATGGCGTCACGTGGCATGGGGGCGGGCCTCGGCCACCTCCTGTTCCGCCACGGACTGCCCAACT
CAATCGATATTCTCGTCGTCTATGCAACCTTGCAGGTGGCCAACGCCATCCTGCTGGAAGCCGGTCTCTCCTTCCTTGGC
CTCGGCGTGCCGCCACCGGCGGCAAGTTGGGGCAACATGCTCAACGCCGCCCGCTCCACCGCCGTATTGGAACAGTTCCC
ATGGCAATGGCTCTTCCCCGGAGGCGCGCTCGTGCTGGCCGTATTGGCGATCAACTTTATCGGTGATGGTCTGAGGGATG
CCTTTGACCCCCGCGCAGAACTCAACTGA

Upstream 100 bases:

>100_bases
ATCAATGCAGTCGAAACCCGCGACTATCCGGTCATCATGGGCGCAACGCTTGTGATTGGCGCCTGTGTCATCATCGTCAA
TATCCTGACCGATCTGGCCT

Downstream 100 bases:

>100_bases
ACCAGAAAGCGAATTTGAAATGTCGAAATTTTTTGGCGTTGTCCCTCCCGTCGTCACTCCGCTTAACGATGACCATTCAG
TCGATTACGATTCCTATACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MRSSIHASRLRKMGQSIPASTGPMARSANRFLQNRAAIFGLVLLTPLLFAVLTYPLWLPYKPNDIDLMAMNSAPSWKHWF
GTDGVGRDVFARTMEGGRISLLVAVSSVVLSTAIGFLIGAISALGGRWADAIAMRSVDLAMTLPPVIFLLVLASIIGSGI
WSTVVVIALLLWPVLSRMIRARLLELREREFVMASRGMGAGLGHLLFRHGLPNSIDILVVYATLQVANAILLEAGLSFLG
LGVPPPAASWGNMLNAARSTAVLEQFPWQWLFPGGALVLAVLAINFIGDGLRDAFDPRAELN

Sequences:

>Translated_302_residues
MRSSIHASRLRKMGQSIPASTGPMARSANRFLQNRAAIFGLVLLTPLLFAVLTYPLWLPYKPNDIDLMAMNSAPSWKHWF
GTDGVGRDVFARTMEGGRISLLVAVSSVVLSTAIGFLIGAISALGGRWADAIAMRSVDLAMTLPPVIFLLVLASIIGSGI
WSTVVVIALLLWPVLSRMIRARLLELREREFVMASRGMGAGLGHLLFRHGLPNSIDILVVYATLQVANAILLEAGLSFLG
LGVPPPAASWGNMLNAARSTAVLEQFPWQWLFPGGALVLAVLAINFIGDGLRDAFDPRAELN
>Mature_302_residues
MRSSIHASRLRKMGQSIPASTGPMARSANRFLQNRAAIFGLVLLTPLLFAVLTYPLWLPYKPNDIDLMAMNSAPSWKHWF
GTDGVGRDVFARTMEGGRISLLVAVSSVVLSTAIGFLIGAISALGGRWADAIAMRSVDLAMTLPPVIFLLVLASIIGSGI
WSTVVVIALLLWPVLSRMIRARLLELREREFVMASRGMGAGLGHLLFRHGLPNSIDILVVYATLQVANAILLEAGLSFLG
LGVPPPAASWGNMLNAARSTAVLEQFPWQWLFPGGALVLAVLAINFIGDGLRDAFDPRAELN

Specific function: Probably part of an ABC transporter complex that could be involved in peptide import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=260, Percent_Identity=37.6923076923077, Blast_Score=185, Evalue=4e-48,
Organism=Escherichia coli, GI1787760, Length=259, Percent_Identity=38.996138996139, Blast_Score=174, Evalue=7e-45,
Organism=Escherichia coli, GI1789889, Length=246, Percent_Identity=40.650406504065, Blast_Score=172, Evalue=2e-44,
Organism=Escherichia coli, GI1787498, Length=301, Percent_Identity=35.5481727574751, Blast_Score=171, Evalue=4e-44,
Organism=Escherichia coli, GI1789964, Length=290, Percent_Identity=38.9655172413793, Blast_Score=139, Evalue=2e-34,
Organism=Escherichia coli, GI1788505, Length=282, Percent_Identity=28.7234042553192, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI1787549, Length=279, Percent_Identity=26.8817204301075, Blast_Score=93, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32565; Mature: 32565

Theoretical pI: Translated: 11.22; Mature: 11.22

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSSIHASRLRKMGQSIPASTGPMARSANRFLQNRAAIFGLVLLTPLLFAVLTYPLWLPY
CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KPNDIDLMAMNSAPSWKHWFGTDGVGRDVFARTMEGGRISLLVAVSSVVLSTAIGFLIGA
CCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHH
ISALGGRWADAIAMRSVDLAMTLPPVIFLLVLASIIGSGIWSTVVVIALLLWPVLSRMIR
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
ARLLELREREFVMASRGMGAGLGHLLFRHGLPNSIDILVVYATLQVANAILLEAGLSFLG
HHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
LGVPPPAASWGNMLNAARSTAVLEQFPWQWLFPGGALVLAVLAINFIGDGLRDAFDPRAE
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCCC
LN
CC
>Mature Secondary Structure
MRSSIHASRLRKMGQSIPASTGPMARSANRFLQNRAAIFGLVLLTPLLFAVLTYPLWLPY
CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KPNDIDLMAMNSAPSWKHWFGTDGVGRDVFARTMEGGRISLLVAVSSVVLSTAIGFLIGA
CCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHH
ISALGGRWADAIAMRSVDLAMTLPPVIFLLVLASIIGSGIWSTVVVIALLLWPVLSRMIR
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
ARLLELREREFVMASRGMGAGLGHLLFRHGLPNSIDILVVYATLQVANAILLEAGLSFLG
HHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
LGVPPPAASWGNMLNAARSTAVLEQFPWQWLFPGGALVLAVLAINFIGDGLRDAFDPRAE
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCCC
LN
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA