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The map label for this gene is yulF [H]

Identifier: 163844306

GI number: 163844306

Start: 107089

End: 108138

Strand: Reverse

Name: yulF [H]

Synonym: BSUIS_B0115

Alternate gene names: 163844306

Gene position: 108138-107089 (Counterclockwise)

Preceding gene: 163844308

Following gene: 163844302

Centisome position: 7.72

GC content: 58.0

Gene sequence:

>1050_bases
ATGACGCAAAACGAACGTATAGGCGGAGATTTTCGTTGGGGCATATGGGGCACGGACATGATTGCCTCTAGCTTTGCCGC
CGACATTGCCGCAAGCGCCGGAATGCGCGTTGTTGCGGTTTGTTCTCACACGACGCAAACGGCACAAGCTTTTTGCAGGC
ATATCGGCATTAACAAGGCTTTCGGCAATCCGCATGCGTTTCTGGCCGATCCCGAAATCGATGCCGTCTATATCGCCTCG
CCCAATATGCTGCATGTGGAGCAAGCCCTGGATGCCATAATGGCGGGGAAAGCCTGCCTCATCGAAAAGCCGCTATCGCT
TGATCCAGAAGGCGCGCGCCAGATCGAAACGGCAAGCAAGGCGCGAAACATCTTTGCCATGGAGGCAATGTGGACCCGTT
TCCTTCCCGCGGTGCAAGCGGTGAAGCACGCTATCGATGCAAGCCGCATCGGCACGGTCACGCATATTGAAGCCGATCTT
TCCTATAGCCGCGCCTATGACCCGGAAAGCCGCTTTTTCAGCCCGGCGCTTGGTGGCGGAGCCGCTTTTGATCTTGGCGT
TTATCCCCTTTCGCTGGCGCTTTATTTTCTGGGCCTGCCAGAAAAGGTTGATGGACATTGCCAGCGCGCGGCAAGCGGCG
TCGATTTGCGCAGTGAATTCAACCTCGGCTGGCCCAGCGCAACCGCCTGGATTTCCTGCGGCTTCGACAGGGACGGGGAA
AACCGGATGTTGATCGAGGGAACTGACGGCGCAATCCTGATCCACCCGCCCTTCCTGAAAGCGCAAAGGCTGACATTCTT
TTCGCGTTCGGCCCTGCACTCGCCCTTCGGCCCGAAAAACAGCAAGGGCCGCATCGGTAACATCATCAATCGCCTGCCGC
TGCCCGGCCGCACAATCGAAACTCATGCCTTTGCAGGCAACGGGCTTCAATTTCAGGCACAAGCCGTGCGCGATGCCATC
CGGCGCGGGGAAATTTCCACCCCCATCATGCCGCTGGCACAGAGCGCGGCGGTCGCCGATATCATCAGCAGGGTTTTGGT
ATCGGGTTAG

Upstream 100 bases:

>100_bases
AAATCGTTTAGGGCGCCGCTTATTCCGCGAAAGAACCTTCATCAATTCCAGCTTCATGGGTTATACAGCACCCACATAAA
AGCAGGCAAGGCAAGCAGGA

Downstream 100 bases:

>100_bases
AAGCTGCTTTTCATCCTGTAAACGGCAGCCCCCTGACCCGCATTATTGAGGGCGAGCGCAATTTCCGTGATATGCAGCGC
CACATCGCCGGAGAAAAACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 348

Protein sequence:

>349_residues
MTQNERIGGDFRWGIWGTDMIASSFAADIAASAGMRVVAVCSHTTQTAQAFCRHIGINKAFGNPHAFLADPEIDAVYIAS
PNMLHVEQALDAIMAGKACLIEKPLSLDPEGARQIETASKARNIFAMEAMWTRFLPAVQAVKHAIDASRIGTVTHIEADL
SYSRAYDPESRFFSPALGGGAAFDLGVYPLSLALYFLGLPEKVDGHCQRAASGVDLRSEFNLGWPSATAWISCGFDRDGE
NRMLIEGTDGAILIHPPFLKAQRLTFFSRSALHSPFGPKNSKGRIGNIINRLPLPGRTIETHAFAGNGLQFQAQAVRDAI
RRGEISTPIMPLAQSAAVADIISRVLVSG

Sequences:

>Translated_349_residues
MTQNERIGGDFRWGIWGTDMIASSFAADIAASAGMRVVAVCSHTTQTAQAFCRHIGINKAFGNPHAFLADPEIDAVYIAS
PNMLHVEQALDAIMAGKACLIEKPLSLDPEGARQIETASKARNIFAMEAMWTRFLPAVQAVKHAIDASRIGTVTHIEADL
SYSRAYDPESRFFSPALGGGAAFDLGVYPLSLALYFLGLPEKVDGHCQRAASGVDLRSEFNLGWPSATAWISCGFDRDGE
NRMLIEGTDGAILIHPPFLKAQRLTFFSRSALHSPFGPKNSKGRIGNIINRLPLPGRTIETHAFAGNGLQFQAQAVRDAI
RRGEISTPIMPLAQSAAVADIISRVLVSG
>Mature_348_residues
TQNERIGGDFRWGIWGTDMIASSFAADIAASAGMRVVAVCSHTTQTAQAFCRHIGINKAFGNPHAFLADPEIDAVYIASP
NMLHVEQALDAIMAGKACLIEKPLSLDPEGARQIETASKARNIFAMEAMWTRFLPAVQAVKHAIDASRIGTVTHIEADLS
YSRAYDPESRFFSPALGGGAAFDLGVYPLSLALYFLGLPEKVDGHCQRAASGVDLRSEFNLGWPSATAWISCGFDRDGEN
RMLIEGTDGAILIHPPFLKAQRLTFFSRSALHSPFGPKNSKGRIGNIINRLPLPGRTIETHAFAGNGLQFQAQAVRDAIR
RGEISTPIMPLAQSAAVADIISRVLVSG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Homo sapiens, GI7657212, Length=341, Percent_Identity=26.6862170087977, Blast_Score=129, Evalue=4e-30,
Organism=Escherichia coli, GI145693182, Length=264, Percent_Identity=25.3787878787879, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1787574, Length=202, Percent_Identity=28.7128712871287, Blast_Score=75, Evalue=6e-15,
Organism=Drosophila melanogaster, GI24581117, Length=335, Percent_Identity=28.6567164179104, Blast_Score=129, Evalue=4e-30,
Organism=Drosophila melanogaster, GI24581115, Length=344, Percent_Identity=27.6162790697674, Blast_Score=107, Evalue=8e-24,
Organism=Drosophila melanogaster, GI24584727, Length=344, Percent_Identity=24.1279069767442, Blast_Score=104, Evalue=9e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 37620; Mature: 37489

Theoretical pI: Translated: 7.31; Mature: 7.31

Prosite motif: PS00559 MOLYBDOPTERIN_EUK

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQNERIGGDFRWGIWGTDMIASSFAADIAASAGMRVVAVCSHTTQTAQAFCRHIGINKA
CCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCCC
FGNPHAFLADPEIDAVYIASPNMLHVEQALDAIMAGKACLIEKPLSLDPEGARQIETASK
CCCCCEEEECCCCCEEEEECCCEEHHHHHHHHHHCCCHHEECCCCCCCCCHHHHHHHHHH
ARNIFAMEAMWTRFLPAVQAVKHAIDASRIGTVTHIEADLSYSRAYDPESRFFSPALGGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHCCCCCHHHCCCCCCCCC
AAFDLGVYPLSLALYFLGLPEKVDGHCQRAASGVDLRSEFNLGWPSATAWISCGFDRDGE
CEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHCCCCCCCCCCEEEEECCCCCCC
NRMLIEGTDGAILIHPPFLKAQRLTFFSRSALHSPFGPKNSKGRIGNIINRLPLPGRTIE
CEEEEECCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCEEE
THAFAGNGLQFQAQAVRDAIRRGEISTPIMPLAQSAAVADIISRVLVSG
EEEECCCCCEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TQNERIGGDFRWGIWGTDMIASSFAADIAASAGMRVVAVCSHTTQTAQAFCRHIGINKA
CCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCCC
FGNPHAFLADPEIDAVYIASPNMLHVEQALDAIMAGKACLIEKPLSLDPEGARQIETASK
CCCCCEEEECCCCCEEEEECCCEEHHHHHHHHHHCCCHHEECCCCCCCCCHHHHHHHHHH
ARNIFAMEAMWTRFLPAVQAVKHAIDASRIGTVTHIEADLSYSRAYDPESRFFSPALGGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHCCCCCHHHCCCCCCCCC
AAFDLGVYPLSLALYFLGLPEKVDGHCQRAASGVDLRSEFNLGWPSATAWISCGFDRDGE
CEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHCCCCCCCCCCEEEEECCCCCCC
NRMLIEGTDGAILIHPPFLKAQRLTFFSRSALHSPFGPKNSKGRIGNIINRLPLPGRTIE
CEEEEECCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCEEE
THAFAGNGLQFQAQAVRDAIRRGEISTPIMPLAQSAAVADIISRVLVSG
EEEECCCCCEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]