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The map label for this gene is virB10 [H]

Identifier: 163844258

GI number: 163844258

Start: 57917

End: 59092

Strand: Reverse

Name: virB10 [H]

Synonym: BSUIS_B0064

Alternate gene names: 163844258

Gene position: 59092-57917 (Counterclockwise)

Preceding gene: 163844259

Following gene: 163844257

Centisome position: 4.22

GC content: 58.5

Gene sequence:

>1176_bases
ATGACACAGGAAAACATTCCGGTGCAGCCGGGCACACTTGACGGTGAGCGTGGCCTACCCACCGTGAACGAAAACGGCTC
CGGCCGCACCCGCAAGGTGTTGCTCTTTCTCTTTGTCGTGGGCTTCATCGTCGTGCTGCTGTTGCTGCTCGTGTTTCACA
TGAGGGGCAATGCAGAGAATAATCACCATTCAGACAAGACGATGGTGCAGACCAGCACAGTTCCGATGCGAACTTTCAAG
CTGCCACCCCCGCCACCACCAGCACCACCAGCACCACCAGAACCACCAGCCCCGCCACCGGCCCCAGCCATGCCCATCGC
GGAACCCGCAGCGGCGGCGCTGAGCCTGCCACCATTGCCGGATGATACACCGGCAAAGGACGATGTACTGGACAAGTCGG
CCAGCGCGTTGATGGTCGTCACCAAGTCCAGCGGCGATACGAACGCTCAAACGGCCGGCGATACGGTCGTTCAAACGACC
AATGCGCGCATTCAAGCCCTGCTCGACAGTCAAAAGAACACCAAGCAGGATGCTGGATCGCTGGGTACTCTCCTTCACGG
CACACAAACGGATGCACGCATGGCGAGCCTTCTGCGCAACCGTGATTTCCTGCTCGCGAAGGGCAGCATCATCAATTGCG
CGCTGCAAACCCGTCTGGATTCGACGGTGCCGGGCATGGCTGCCTGCGTGGTCACACGCAACATGTATAGCGATAACGGC
AAGGTGTTGCTGATTGAGCGCGGTTCAACCATCTCGGGTGAATATGATGCCAACGTAAAGCAGGGCATGGCTCGCATTTA
TGTCCTGTGGACGCGCGTGAAGACGCCAAACGGTGTCGTGATCGATCTCGACTCTCCAGGCGCCGACCCCCTGGGCGGGG
CAGGCTTGCCCGGCTACATCGACTCCCACTTCTGGAAGCGCTTTGGCGGCGCCTTGATGTTGAGCACGATCGAGACCCTC
GGCCGCTATGCAACCCAGAAGGTCGGCGGCGGGGGTTCAAATCAGATCAACCTCAATACCGGCGGAGGTGAATCGACGAG
CAACCTGGCTTCAACTGCCTTGAAGGATACGATCAACATTCCGCCGACACTGTACAAGAACCAGGGCGAAGAGATCGGCA
TCTATATCGCCCGCGACCTAGATTTTTCGAGTGTGTATGATGTCAAACCGAAGTGA

Upstream 100 bases:

>100_bases
TCTACAACGAATCCTTCAATCCTGATGGCGTTCCCGCACGCGACGGAACCACAGTGCCAGGCGTCAAGCGCGTCATCAAA
TCGCCCGGGGAGAACCTGCA

Downstream 100 bases:

>100_bases
CTTTATTGTGCCTGACGAGGCGGCCGTCAAACGGGCGGCCTCGGTCAATTTCCATCTGGAACCGCTGCGCCCTTGGTTGG
ACGATCCGCAGATCACCGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 390

Protein sequence:

>391_residues
MTQENIPVQPGTLDGERGLPTVNENGSGRTRKVLLFLFVVGFIVVLLLLLVFHMRGNAENNHHSDKTMVQTSTVPMRTFK
LPPPPPPAPPAPPEPPAPPPAPAMPIAEPAAAALSLPPLPDDTPAKDDVLDKSASALMVVTKSSGDTNAQTAGDTVVQTT
NARIQALLDSQKNTKQDAGSLGTLLHGTQTDARMASLLRNRDFLLAKGSIINCALQTRLDSTVPGMAACVVTRNMYSDNG
KVLLIERGSTISGEYDANVKQGMARIYVLWTRVKTPNGVVIDLDSPGADPLGGAGLPGYIDSHFWKRFGGALMLSTIETL
GRYATQKVGGGGSNQINLNTGGGESTSNLASTALKDTINIPPTLYKNQGEEIGIYIARDLDFSSVYDVKPK

Sequences:

>Translated_391_residues
MTQENIPVQPGTLDGERGLPTVNENGSGRTRKVLLFLFVVGFIVVLLLLLVFHMRGNAENNHHSDKTMVQTSTVPMRTFK
LPPPPPPAPPAPPEPPAPPPAPAMPIAEPAAAALSLPPLPDDTPAKDDVLDKSASALMVVTKSSGDTNAQTAGDTVVQTT
NARIQALLDSQKNTKQDAGSLGTLLHGTQTDARMASLLRNRDFLLAKGSIINCALQTRLDSTVPGMAACVVTRNMYSDNG
KVLLIERGSTISGEYDANVKQGMARIYVLWTRVKTPNGVVIDLDSPGADPLGGAGLPGYIDSHFWKRFGGALMLSTIETL
GRYATQKVGGGGSNQINLNTGGGESTSNLASTALKDTINIPPTLYKNQGEEIGIYIARDLDFSSVYDVKPK
>Mature_390_residues
TQENIPVQPGTLDGERGLPTVNENGSGRTRKVLLFLFVVGFIVVLLLLLVFHMRGNAENNHHSDKTMVQTSTVPMRTFKL
PPPPPPAPPAPPEPPAPPPAPAMPIAEPAAAALSLPPLPDDTPAKDDVLDKSASALMVVTKSSGDTNAQTAGDTVVQTTN
ARIQALLDSQKNTKQDAGSLGTLLHGTQTDARMASLLRNRDFLLAKGSIINCALQTRLDSTVPGMAACVVTRNMYSDNGK
VLLIERGSTISGEYDANVKQGMARIYVLWTRVKTPNGVVIDLDSPGADPLGGAGLPGYIDSHFWKRFGGALMLSTIETLG
RYATQKVGGGGSNQINLNTGGGESTSNLASTALKDTINIPPTLYKNQGEEIGIYIARDLDFSSVYDVKPK

Specific function: The virB system could be required for the establishment of the replication niche in the host [H]

COG id: COG2948

COG function: function code U; Type IV secretory pathway, VirB10 components

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbI/virB10 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005498 [H]

Pfam domain/function: PF03743 TrbI [H]

EC number: NA

Molecular weight: Translated: 41459; Mature: 41328

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQENIPVQPGTLDGERGLPTVNENGSGRTRKVLLFLFVVGFIVVLLLLLVFHMRGNAEN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
NHHSDKTMVQTSTVPMRTFKLPPPPPPAPPAPPEPPAPPPAPAMPIAEPAAAALSLPPLP
CCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHEECCCCC
DDTPAKDDVLDKSASALMVVTKSSGDTNAQTAGDTVVQTTNARIQALLDSQKNTKQDAGS
CCCCCCHHHHCCCCCEEEEEEECCCCCCCCCCCCEEEEECCHHHHHHHHCCCCCHHHHHH
LGTLLHGTQTDARMASLLRNRDFLLAKGSIINCALQTRLDSTVPGMAACVVTRNMYSDNG
HHHHHCCCCHHHHHHHHHHCCCEEEECCCEEEEHHHHHHCCCCCCCEEEEEECCEECCCC
KVLLIERGSTISGEYDANVKQGMARIYVLWTRVKTPNGVVIDLDSPGADPLGGAGLPGYI
CEEEEECCCCCCCCCCCHHHHHHEEEEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCHH
DSHFWKRFGGALMLSTIETLGRYATQKVGGGGSNQINLNTGGGESTSNLASTALKDTINI
HHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCC
PPTLYKNQGEEIGIYIARDLDFSSVYDVKPK
CCHHCCCCCCEEEEEEEECCCCCCEECCCCC
>Mature Secondary Structure 
TQENIPVQPGTLDGERGLPTVNENGSGRTRKVLLFLFVVGFIVVLLLLLVFHMRGNAEN
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
NHHSDKTMVQTSTVPMRTFKLPPPPPPAPPAPPEPPAPPPAPAMPIAEPAAAALSLPPLP
CCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHEECCCCC
DDTPAKDDVLDKSASALMVVTKSSGDTNAQTAGDTVVQTTNARIQALLDSQKNTKQDAGS
CCCCCCHHHHCCCCCEEEEEEECCCCCCCCCCCCEEEEECCHHHHHHHHCCCCCHHHHHH
LGTLLHGTQTDARMASLLRNRDFLLAKGSIINCALQTRLDSTVPGMAACVVTRNMYSDNG
HHHHHCCCCHHHHHHHHHHCCCEEEECCCEEEEHHHHHHCCCCCCCEEEEEECCEECCCC
KVLLIERGSTISGEYDANVKQGMARIYVLWTRVKTPNGVVIDLDSPGADPLGGAGLPGYI
CEEEEECCCCCCCCCCCHHHHHHEEEEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCHH
DSHFWKRFGGALMLSTIETLGRYATQKVGGGGSNQINLNTGGGESTSNLASTALKDTINI
HHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCC
PPTLYKNQGEEIGIYIARDLDFSSVYDVKPK
CCHHCCCCCCEEEEEEEECCCCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11830669; 12271122 [H]