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The map label for this gene is yitS [H]

Identifier: 162447596

GI number: 162447596

Start: 779823

End: 780662

Strand: Direct

Name: yitS [H]

Synonym: ACL_0736

Alternate gene names: 162447596

Gene position: 779823-780662 (Clockwise)

Preceding gene: 162447570

Following gene: 162447597

Centisome position: 52.09

GC content: 32.38

Gene sequence:

>840_bases
ATGATAAAAATAATTGTAGATTCAACCTGCGACTTAAGTGAAGCTTTTATCGAAAAATATCAAATTGATATCGTACCACT
TCAAGTCATCATCAATGACAAAAACTATAAAGATAAGTTTGAAGTAGATATCAATCAACTATACGAGCACATTAGACAAA
AAGATGACATCAAAACTTCATTACCAAGTTATGACGATATCTTCCCAATCTTTGAAAAATACGCAAAAGCAAATCAACCA
TTTATATTCTTCTCATTTTCTAAAGCACTGTCTGGTACATTTAACTTTGCAAATTTATTAATCAAAGATCTAAAAGATAC
CTACAACACACAAATGAGCGTTGTAGACTTTAAAAATGGTGGTCTTGCAAGTGCAGTAATGATGGAAGAAATTGTAGCTT
TCATGGAAACTAATAATAACATTGATGATGTAGTTAAGTTTAGTGAGCATTTAGTCAATCGCATGCATCACGCAGTGATG
CTTGAAGACTTATCTCAATTAAGAAAAGGTGGCAGAATCTCTGCTGTCAAATCCATCATATCAAGCGCATTATCAATTAA
ACCTATCTTAGAACTTGTTGATGGACATATTGCATCCTATAAAAACGCAATCGGTTCTAAACGTGCACTAAATGATCTCA
TGCATTATGTAACTTCAAAAGCACCAGACAAAGAAACTAAAATCGGTGTACTTTATTCAGCAAATGAGGATTTATTAAAT
CAGATGCTAACAAGACTTGATAAGCATGGTTATAAAAACATTGTTGTTGGTAGAATCGCAAGTGTAATGACAGCACATAT
TGGCTTAGACGCTGTATCAGTTTGTTTCTTAAGTAATTAA

Upstream 100 bases:

>100_bases
ATTAACTCTATTGTGTGAAAATAATTAGTAGGTTTACCTATTAGCGAAGCGGATTTATAATAAATAGTAGTAAATAGACA
CTATAAAGGAGTAATTTGAC

Downstream 100 bases:

>100_bases
TTTAAAACACTTCAAACCTAAATCAATGTTTGAAGTGTTTTTTTTTTATTCATATTATATGTTTTTTAATTGAATTCTCC
CATAGAATATTAGAATTAAT

Product: DegV family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MIKIIVDSTCDLSEAFIEKYQIDIVPLQVIINDKNYKDKFEVDINQLYEHIRQKDDIKTSLPSYDDIFPIFEKYAKANQP
FIFFSFSKALSGTFNFANLLIKDLKDTYNTQMSVVDFKNGGLASAVMMEEIVAFMETNNNIDDVVKFSEHLVNRMHHAVM
LEDLSQLRKGGRISAVKSIISSALSIKPILELVDGHIASYKNAIGSKRALNDLMHYVTSKAPDKETKIGVLYSANEDLLN
QMLTRLDKHGYKNIVVGRIASVMTAHIGLDAVSVCFLSN

Sequences:

>Translated_279_residues
MIKIIVDSTCDLSEAFIEKYQIDIVPLQVIINDKNYKDKFEVDINQLYEHIRQKDDIKTSLPSYDDIFPIFEKYAKANQP
FIFFSFSKALSGTFNFANLLIKDLKDTYNTQMSVVDFKNGGLASAVMMEEIVAFMETNNNIDDVVKFSEHLVNRMHHAVM
LEDLSQLRKGGRISAVKSIISSALSIKPILELVDGHIASYKNAIGSKRALNDLMHYVTSKAPDKETKIGVLYSANEDLLN
QMLTRLDKHGYKNIVVGRIASVMTAHIGLDAVSVCFLSN
>Mature_279_residues
MIKIIVDSTCDLSEAFIEKYQIDIVPLQVIINDKNYKDKFEVDINQLYEHIRQKDDIKTSLPSYDDIFPIFEKYAKANQP
FIFFSFSKALSGTFNFANLLIKDLKDTYNTQMSVVDFKNGGLASAVMMEEIVAFMETNNNIDDVVKFSEHLVNRMHHAVM
LEDLSQLRKGGRISAVKSIISSALSIKPILELVDGHIASYKNAIGSKRALNDLMHYVTSKAPDKETKIGVLYSANEDLLN
QMLTRLDKHGYKNIVVGRIASVMTAHIGLDAVSVCFLSN

Specific function: Unknown

COG id: COG1307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DegV domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003797 [H]

Pfam domain/function: PF02645 DegV [H]

EC number: NA

Molecular weight: Translated: 31439; Mature: 31439

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKIIVDSTCDLSEAFIEKYQIDIVPLQVIINDKNYKDKFEVDINQLYEHIRQKDDIKTS
CEEEEECCCCCHHHHHHHHHHEEEEEEEEEECCCCCCCHHHCCHHHHHHHHHHHCCHHHC
LPSYDDIFPIFEKYAKANQPFIFFSFSKALSGTFNFANLLIKDLKDTYNTQMSVVDFKNG
CCCCCHHHHHHHHHHCCCCCEEEEEEHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEECCC
GLASAVMMEEIVAFMETNNNIDDVVKFSEHLVNRMHHAVMLEDLSQLRKGGRISAVKSII
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
SSALSIKPILELVDGHIASYKNAIGSKRALNDLMHYVTSKAPDKETKIGVLYSANEDLLN
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCHHHHH
QMLTRLDKHGYKNIVVGRIASVMTAHIGLDAVSVCFLSN
HHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHCCC
>Mature Secondary Structure
MIKIIVDSTCDLSEAFIEKYQIDIVPLQVIINDKNYKDKFEVDINQLYEHIRQKDDIKTS
CEEEEECCCCCHHHHHHHHHHEEEEEEEEEECCCCCCCHHHCCHHHHHHHHHHHCCHHHC
LPSYDDIFPIFEKYAKANQPFIFFSFSKALSGTFNFANLLIKDLKDTYNTQMSVVDFKNG
CCCCCHHHHHHHHHHCCCCCEEEEEEHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEECCC
GLASAVMMEEIVAFMETNNNIDDVVKFSEHLVNRMHHAVMLEDLSQLRKGGRISAVKSII
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
SSALSIKPILELVDGHIASYKNAIGSKRALNDLMHYVTSKAPDKETKIGVLYSANEDLLN
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCHHHHH
QMLTRLDKHGYKNIVVGRIASVMTAHIGLDAVSVCFLSN
HHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9025291; 9353931; 9384377 [H]