| Definition | Acholeplasma laidlawii PG-8A chromosome, complete genome. |
|---|---|
| Accession | NC_010163 |
| Length | 1,496,992 |
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The map label for this gene is 162447471
Identifier: 162447471
GI number: 162447471
Start: 641170
End: 642384
Strand: Direct
Name: 162447471
Synonym: ACL_0610
Alternate gene names: NA
Gene position: 641170-642384 (Clockwise)
Preceding gene: 162447470
Following gene: 162447472
Centisome position: 42.83
GC content: 33.91
Gene sequence:
>1215_bases TTGGGTATTTTTAATAGAAAGAAAAAACAAGGCTCAGCAGAGTCATTTAAGTTTGTAAATGAAATCAATCTACCACTTAC TAATTTTGGTACTAACATCTCAAAATCTGATGTTGTGAAGATTGCGATTGATAGGATAGCAAGTCAGTGTGCAAAATTAA AACCACGATACATAAAGAAATCAAACGATAAGACAGTTACAGAGAAATCTGGCAAACTGTCTTTTATTTTAAAGCACCAA CCAAATGAGGTCATGACACCTTATCAGTTTATCTATATGGTGATTACGACATTGTTAATGAACGACAATGCATTTATCTA TCCAATGTTTGATAGTTCAACTGGTGAAATCAAAGCTCTTTATCCACTAAAACCATCCATCGTTGAACCAATTATTGATT CTTGTGGTAGTTATTACTTGAAGTTTAGTTTTGATAGTCAAGAATCCTTTACGATTCCATACGAGAACATTATTCACATC AAAAGATTCTATCACACGAATCAGATCTTCGGTGGTTCAAGTTCAAAAGGTGACCAAGAAGCACTCTTGAAAACAATCCA AATTAATGAGAATGTACTTCAAGGTATTGATAACGCACTTAAGAACTCCATGCAGATTAAAGGACTACTCAAAATGAGTG CTATGCTAAGTGAAACAGATAAAAAGAAACAACTTGATTCATTTAATGAAATACTTAAAGAGTCCATTAGGAATAAGGGT AGTTCTATTATTCCGGTAGATTTGAAAGGTGATTATGTGCCTTTAACAACAGACCCAAAGTTAATCGATAAGGATACCTT AGAGTTCCTACAATCAAAAATCCTAGATTACTTTGGTGTATCAGTTCCAATCTTTCATTCCAAATATACAGAAGATGAAT TCAACTCATTTTATGAACAAACCATCGAGCCTTTAGCCATTCAAATGTCTGAGGCTTTTTCTTTAGGCTTGCTTACTCAA AATGAAATCATGCGAGGTGAGGAGATTATCTTTTATAGTGAAAGACTTCAATACGCATCATGGAACACAAAGGTTACAGC GATTGAAAAACTGATGGGGTTAGGCATCATGTCACTTAATGAATCAAGAGGGTTGTTAGGACTTGAACCAGTAGAAAATG GTGATAGAAGATTACAGTCACTCAATTATGTCGATGCTACTAAAGCAAACGAATATCAAGTAGGGAAGGATGATTTTAAT GAAGGTAACAATTAA
Upstream 100 bases:
>100_bases AGCGATGAATGAAGTGAAATCTAGGAACACTGAATTGCTTAAAATCATGACCAGTTTCATTGAATTATTCAGGAGTAATA GTTAAAAAGAGGTGATATAG
Downstream 100 bases:
>100_bases TGGTAAGGTTTCAAAAGATGTATTAAATACAGTCTTAGAAGAACAGAAAGAAAAGATTAATACGATAGAAATATTTTGTA AGACACACAAGATTAATGAG
Product: bacteriophage portal protein
Products: NA
Alternate protein names: Portal Protein; Bacteriophage Portal Protein; Phage-Like; Phage-Related Head Portal Protein
Number of amino acids: Translated: 404; Mature: 403
Protein sequence:
>404_residues MGIFNRKKKQGSAESFKFVNEINLPLTNFGTNISKSDVVKIAIDRIASQCAKLKPRYIKKSNDKTVTEKSGKLSFILKHQ PNEVMTPYQFIYMVITTLLMNDNAFIYPMFDSSTGEIKALYPLKPSIVEPIIDSCGSYYLKFSFDSQESFTIPYENIIHI KRFYHTNQIFGGSSSKGDQEALLKTIQINENVLQGIDNALKNSMQIKGLLKMSAMLSETDKKKQLDSFNEILKESIRNKG SSIIPVDLKGDYVPLTTDPKLIDKDTLEFLQSKILDYFGVSVPIFHSKYTEDEFNSFYEQTIEPLAIQMSEAFSLGLLTQ NEIMRGEEIIFYSERLQYASWNTKVTAIEKLMGLGIMSLNESRGLLGLEPVENGDRRLQSLNYVDATKANEYQVGKDDFN EGNN
Sequences:
>Translated_404_residues MGIFNRKKKQGSAESFKFVNEINLPLTNFGTNISKSDVVKIAIDRIASQCAKLKPRYIKKSNDKTVTEKSGKLSFILKHQ PNEVMTPYQFIYMVITTLLMNDNAFIYPMFDSSTGEIKALYPLKPSIVEPIIDSCGSYYLKFSFDSQESFTIPYENIIHI KRFYHTNQIFGGSSSKGDQEALLKTIQINENVLQGIDNALKNSMQIKGLLKMSAMLSETDKKKQLDSFNEILKESIRNKG SSIIPVDLKGDYVPLTTDPKLIDKDTLEFLQSKILDYFGVSVPIFHSKYTEDEFNSFYEQTIEPLAIQMSEAFSLGLLTQ NEIMRGEEIIFYSERLQYASWNTKVTAIEKLMGLGIMSLNESRGLLGLEPVENGDRRLQSLNYVDATKANEYQVGKDDFN EGNN >Mature_403_residues GIFNRKKKQGSAESFKFVNEINLPLTNFGTNISKSDVVKIAIDRIASQCAKLKPRYIKKSNDKTVTEKSGKLSFILKHQP NEVMTPYQFIYMVITTLLMNDNAFIYPMFDSSTGEIKALYPLKPSIVEPIIDSCGSYYLKFSFDSQESFTIPYENIIHIK RFYHTNQIFGGSSSKGDQEALLKTIQINENVLQGIDNALKNSMQIKGLLKMSAMLSETDKKKQLDSFNEILKESIRNKGS SIIPVDLKGDYVPLTTDPKLIDKDTLEFLQSKILDYFGVSVPIFHSKYTEDEFNSFYEQTIEPLAIQMSEAFSLGLLTQN EIMRGEEIIFYSERLQYASWNTKVTAIEKLMGLGIMSLNESRGLLGLEPVENGDRRLQSLNYVDATKANEYQVGKDDFNE GNN
Specific function: Unknown
COG id: COG4695
COG function: function code S; Phage-related protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45880; Mature: 45749
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIFNRKKKQGSAESFKFVNEINLPLTNFGTNISKSDVVKIAIDRIASQCAKLKPRYIKK CCCCCCCCCCCCHHHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHCC SNDKTVTEKSGKLSFILKHQPNEVMTPYQFIYMVITTLLMNDNAFIYPMFDSSTGEIKAL CCCCEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEE YPLKPSIVEPIIDSCGSYYLKFSFDSQESFTIPYENIIHIKRFYHTNQIFGGSSSKGDQE ECCCHHHHHHHHHCCCCEEEEEEECCCCCEECCHHHHHHHHHHHHHCCCCCCCCCCCHHH ALLKTIQINENVLQGIDNALKNSMQIKGLLKMSAMLSETDKKKQLDSFNEILKESIRNKG HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SSIIPVDLKGDYVPLTTDPKLIDKDTLEFLQSKILDYFGVSVPIFHSKYTEDEFNSFYEQ CCEEEEECCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHH TIEPLAIQMSEAFSLGLLTQNEIMRGEEIIFYSERLQYASWNTKVTAIEKLMGLGIMSLN HHHHHHHHHHHHHHCCCCCHHHHCCCCEEEEEECHHHHCCCCCHHHHHHHHHCCCCEEEC ESRGLLGLEPVENGDRRLQSLNYVDATKANEYQVGKDDFNEGNN CCCCCEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GIFNRKKKQGSAESFKFVNEINLPLTNFGTNISKSDVVKIAIDRIASQCAKLKPRYIKK CCCCCCCCCCCHHHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHCC SNDKTVTEKSGKLSFILKHQPNEVMTPYQFIYMVITTLLMNDNAFIYPMFDSSTGEIKAL CCCCEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEE YPLKPSIVEPIIDSCGSYYLKFSFDSQESFTIPYENIIHIKRFYHTNQIFGGSSSKGDQE ECCCHHHHHHHHHCCCCEEEEEEECCCCCEECCHHHHHHHHHHHHHCCCCCCCCCCCHHH ALLKTIQINENVLQGIDNALKNSMQIKGLLKMSAMLSETDKKKQLDSFNEILKESIRNKG HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SSIIPVDLKGDYVPLTTDPKLIDKDTLEFLQSKILDYFGVSVPIFHSKYTEDEFNSFYEQ CCEEEEECCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHH TIEPLAIQMSEAFSLGLLTQNEIMRGEEIIFYSERLQYASWNTKVTAIEKLMGLGIMSLN HHHHHHHHHHHHHHCCCCCHHHHCCCCEEEEEECHHHHCCCCCHHHHHHHHHCCCCEEEC ESRGLLGLEPVENGDRRLQSLNYVDATKANEYQVGKDDFNEGNN CCCCCEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA