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The map label for this gene is ykoM [H]

Identifier: 162447427

GI number: 162447427

Start: 602535

End: 602981

Strand: Direct

Name: ykoM [H]

Synonym: ACL_0565

Alternate gene names: 162447427

Gene position: 602535-602981 (Clockwise)

Preceding gene: 162447426

Following gene: 162447428

Centisome position: 40.25

GC content: 30.87

Gene sequence:

>447_bases
ATGCTAGAAACTGATAATTTAAAGACGATGCGCATTTTATTTAGAGCAGTTCAGTCGGTTGAACATATTGTAAAAAAAGA
TGTTAAAAACTATAACTTAACTGTAAATGAATTTGCAGCATTAGAAGCACTCTATCAAAAGGGTAGAGTCTCTGTAAACA
CCATGTGTCAAATGGTTTTAATACCAAACTCCTCAATGACTTATGTGTTAGATAAACTAGAAGAAAAAAGTTATATTACA
CGTACTCAAGACCCAGATGATAAAAGAACCTTTTATGTAGAACTTAGCACAGAGGGTAAAAAGTATGCTGATGAGATCTT
ACCTAAACACTATAAGGTTATGAATCAAGTATTTTCTATTCTTACTAAAGAAGAACAGGAGTTACTTAATCAAACTTTAA
AGAAATTAGGTTATCACGCCATAGATATGGAGGAATTAATTAAATGA

Upstream 100 bases:

>100_bases
ATTTATTAATAAAAGAGCCTATGTTGAAAGTGTTGTTAAACATTTTGATACTGTACGTAGCACCAAAGCATTTGAAAAAG
AATATTTATAGGAGAAAACT

Downstream 100 bases:

>100_bases
AACATATCTTTTTAGATAAAAAAAGTGAATATACATTTTTAGCACTACATGGTACAGGTGGTGATGAAAACGATCTAGTG
CCACTAGTAAATTACTTAAA

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MLETDNLKTMRILFRAVQSVEHIVKKDVKNYNLTVNEFAALEALYQKGRVSVNTMCQMVLIPNSSMTYVLDKLEEKSYIT
RTQDPDDKRTFYVELSTEGKKYADEILPKHYKVMNQVFSILTKEEQELLNQTLKKLGYHAIDMEELIK

Sequences:

>Translated_148_residues
MLETDNLKTMRILFRAVQSVEHIVKKDVKNYNLTVNEFAALEALYQKGRVSVNTMCQMVLIPNSSMTYVLDKLEEKSYIT
RTQDPDDKRTFYVELSTEGKKYADEILPKHYKVMNQVFSILTKEEQELLNQTLKKLGYHAIDMEELIK
>Mature_148_residues
MLETDNLKTMRILFRAVQSVEHIVKKDVKNYNLTVNEFAALEALYQKGRVSVNTMCQMVLIPNSSMTYVLDKLEEKSYIT
RTQDPDDKRTFYVELSTEGKKYADEILPKHYKVMNQVFSILTKEEQELLNQTLKKLGYHAIDMEELIK

Specific function: Negative Regulator Of The Multidrug Operon Emrab. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 17344; Mature: 17344

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLETDNLKTMRILFRAVQSVEHIVKKDVKNYNLTVNEFAALEALYQKGRVSVNTMCQMVL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHEEEEE
IPNSSMTYVLDKLEEKSYITRTQDPDDKRTFYVELSTEGKKYADEILPKHYKVMNQVFSI
ECCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH
LTKEEQELLNQTLKKLGYHAIDMEELIK
HHHHHHHHHHHHHHHHCCCCCCHHHHCC
>Mature Secondary Structure
MLETDNLKTMRILFRAVQSVEHIVKKDVKNYNLTVNEFAALEALYQKGRVSVNTMCQMVL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHEEEEE
IPNSSMTYVLDKLEEKSYITRTQDPDDKRTFYVELSTEGKKYADEILPKHYKVMNQVFSI
ECCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH
LTKEEQELLNQTLKKLGYHAIDMEELIK
HHHHHHHHHHHHHHHHCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]