Click here to switch to the map view.

The map label for this gene is yoqW [H]

Identifier: 162447387

GI number: 162447387

Start: 556239

End: 556910

Strand: Direct

Name: yoqW [H]

Synonym: ACL_0525

Alternate gene names: 162447387

Gene position: 556239-556910 (Clockwise)

Preceding gene: 162447386

Following gene: 162447388

Centisome position: 37.16

GC content: 31.99

Gene sequence:

>672_bases
ATGTGTGGACGTTTTACACTAACTGTGTCAAAAGCTCAATTAGAAGCCTTACTAAAGACCAGATATGATATTTTAGATAG
TCCCAACTTTCAACTACCAAGATATAATATTAGTCCATCTAATGAAGTGGTTAGTATTTTACATGATGGTAAAAGACATC
GAGTTGGCCAGTTAAAATGGGGCTTTAGACCAAAGTTTTCATCAACAGATAAACCTTTAGAAATCATTAATATCAAGGGT
GAAACAGTATTTGAAAAACCAATCTTTAAAGAAAGTGTTCTAAAAAGACGCTGCAGTATTTTAGCAGACAGTTTTTTTGA
ATGGAACAGAGATAAAAGTGATAAAAACCCTTATAGATTTATGACCGATAATGGACTGTTTGCGATGGCAGCAATCTGGC
AAACAGTAGAAACTAAAACGGGTGAAAAGATACATACGGTTGCAATCATTACAACTGAAAGTAATAAACTTATGCATGCT
ATTCATGATAGGATGCCGGTTATATTAACTAAGGAAGAAGAACAAACTTGGCTAAATAATCAAATTAAAGATGTAAAGAC
ATTAGAAAAATTAATTAAGCCTTTTGATGCAGAACATATGTATTATGAAAGAGTTTCAACCTTAGTAAATAACCCTAAAA
ATGATGATATCGCAGTCATTGCAAAAATATAG

Upstream 100 bases:

>100_bases
CGATGGATCCATTAGGAAACAAGATTATACAAAGAAGAAATCCTCTAACTAGAGGATTTTTATTTGCTATGTTACAATAG
ATGTAAAGAGGGTGATACTC

Downstream 100 bases:

>100_bases
ACGAGGAAGATAAAAAATGGATAGATTAAGAAGATTAGGTGACATCTTACAAGCATTTGATGCTTATGATGTTTTTGAGT
ATTATAAATTAAATGGTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MCGRFTLTVSKAQLEALLKTRYDILDSPNFQLPRYNISPSNEVVSILHDGKRHRVGQLKWGFRPKFSSTDKPLEIINIKG
ETVFEKPIFKESVLKRRCSILADSFFEWNRDKSDKNPYRFMTDNGLFAMAAIWQTVETKTGEKIHTVAIITTESNKLMHA
IHDRMPVILTKEEEQTWLNNQIKDVKTLEKLIKPFDAEHMYYERVSTLVNNPKNDDIAVIAKI

Sequences:

>Translated_223_residues
MCGRFTLTVSKAQLEALLKTRYDILDSPNFQLPRYNISPSNEVVSILHDGKRHRVGQLKWGFRPKFSSTDKPLEIINIKG
ETVFEKPIFKESVLKRRCSILADSFFEWNRDKSDKNPYRFMTDNGLFAMAAIWQTVETKTGEKIHTVAIITTESNKLMHA
IHDRMPVILTKEEEQTWLNNQIKDVKTLEKLIKPFDAEHMYYERVSTLVNNPKNDDIAVIAKI
>Mature_223_residues
MCGRFTLTVSKAQLEALLKTRYDILDSPNFQLPRYNISPSNEVVSILHDGKRHRVGQLKWGFRPKFSSTDKPLEIINIKG
ETVFEKPIFKESVLKRRCSILADSFFEWNRDKSDKNPYRFMTDNGLFAMAAIWQTVETKTGEKIHTVAIITTESNKLMHA
IHDRMPVILTKEEEQTWLNNQIKDVKTLEKLIKPFDAEHMYYERVSTLVNNPKNDDIAVIAKI

Specific function: Unknown

COG id: COG2135

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0361 family [H]

Homologues:

Organism=Escherichia coli, GI48994894, Length=227, Percent_Identity=27.7533039647577, Blast_Score=85, Evalue=4e-18,
Organism=Saccharomyces cerevisiae, GI6323761, Length=248, Percent_Identity=26.2096774193548, Blast_Score=71, Evalue=1e-13,
Organism=Drosophila melanogaster, GI21355761, Length=279, Percent_Identity=24.7311827956989, Blast_Score=67, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003738 [H]

Pfam domain/function: PF02586 DUF159 [H]

EC number: NA

Molecular weight: Translated: 25900; Mature: 25900

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCGRFTLTVSKAQLEALLKTRYDILDSPNFQLPRYNISPSNEVVSILHDGKRHRVGQLKW
CCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCC
GFRPKFSSTDKPLEIINIKGETVFEKPIFKESVLKRRCSILADSFFEWNRDKSDKNPYRF
CCCCCCCCCCCCEEEEEECCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE
MTDNGLFAMAAIWQTVETKTGEKIHTVAIITTESNKLMHAIHDRMPVILTKEEEQTWLNN
EECCCCHHHHHHHHHHHHCCCCEEEEEEEEEECCCHHHHHHHCCCCEEEECCHHHHHHHH
QIKDVKTLEKLIKPFDAEHMYYERVSTLVNNPKNDDIAVIAKI
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEC
>Mature Secondary Structure
MCGRFTLTVSKAQLEALLKTRYDILDSPNFQLPRYNISPSNEVVSILHDGKRHRVGQLKW
CCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCC
GFRPKFSSTDKPLEIINIKGETVFEKPIFKESVLKRRCSILADSFFEWNRDKSDKNPYRF
CCCCCCCCCCCCEEEEEECCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE
MTDNGLFAMAAIWQTVETKTGEKIHTVAIITTESNKLMHAIHDRMPVILTKEEEQTWLNN
EECCCCHHHHHHHHHHHHCCCCEEEEEEEEEECCCHHHHHHHCCCCEEEECCHHHHHHHH
QIKDVKTLEKLIKPFDAEHMYYERVSTLVNNPKNDDIAVIAKI
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]