| Definition | Acholeplasma laidlawii PG-8A chromosome, complete genome. |
|---|---|
| Accession | NC_010163 |
| Length | 1,496,992 |
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The map label for this gene is 162447363
Identifier: 162447363
GI number: 162447363
Start: 524154
End: 525905
Strand: Direct
Name: 162447363
Synonym: ACL_0501
Alternate gene names: NA
Gene position: 524154-525905 (Clockwise)
Preceding gene: 162447362
Following gene: 162447365
Centisome position: 35.01
GC content: 34.65
Gene sequence:
>1752_bases ATGAAAAAAATATTAGGTTTATTTTTACTAGTTCTTTCAGCTTTAGTACTTGTAGCATGTACTGAAACAAAAGTTGAAAT CGCTAGATTATCAGTTACGCCACCTACTAAAGTAGAATACGAAGTTGGTGAAGCGTTTGATGCAACTGGTATGGTTGTAA AAGCAATCTATACTGATGGAACTGACAAAACTTTAACAAGTTCAGAATACGAACTTTCTGGTTTTAGTTCAGCAACTCCA GGATTGGTAACTGTTACAGTAACTTACAATGAAGTTACTGAAAAGTTTGGTGTGGCAATCTTTGATAAAGATGCACCTGA AACAGCTTTAGCTATTCGTGTTTTAAGCACACCTGATCAACAATTTTATACAGTATCTGAAGAATTCGATCCAACAGGTC TTGAGGTAGAAGTTACATACTCAACAGGTAGAAAAGAAATTCTAGATGCAAGTGAATATCAATTACTAGGATTTAAGAAA GGTATCATCGGCAAATACGATGTAGTTGTTAAATTTGGGGATCTAGAAACAACATTCTTTACTCAAGTTAGAGCAACTAA TGTCCAAGGTGTGACTGATACAACTATTAAAGTAGGTAACACTGCTGCTATTACTGGTACTTATTCATTTATCGGTATTC CATTTGTTGCTGGTATGAAAGCCGCTTTTGAAGTAGTTAATGAAGCTGGTGGTATTGATGGAAGATTAATCGAATACGTA AACAGAGATGATGGTTTTGATGCAAACGTTGGTATTACTAATACAGGTAAATTAATCAATGAAGATAAAGTATTTGCATT AGTTGGTCACTTTGGAACAGGTACTGTTGCTGCAACTATCCCTACAATTAGAGAAGTTGGTATTCCAATGGTTTATGCAG CTACAGGTGTAAATAATTTATACTTTGAAGTAAGTCCTTTAAATCCAGTTATGCCAGTTCAACCAATCTACTTAACAGAT GGTAGAATTATGACAGCTAGAGCATTAAAAGAAGCAGTTTATGGTCCAAATAAAGACCAAAAATTAGGTGCTAATGATAA AGTTGGTGTTCTATACTCTGCAGCTTTAGATGGTACTTCAATTAAAGAAGGTGTTGAAGTTGAAGCTAAGACTCATGGCG TTAATGGAAACTTCATCTACCAAGTATTTGATCCACAAAATACTGCTCAATTAACAACTACAATTCAAAGTTTTAAAACT GCTGGTGTGAAGTCAATTATTGTTGCTGCTAACCAAGCAGGTTTCAAATCTGTAATTGGTACAATGCAAGCTGAACAATT AAATGTTCCTACATTCACATCTTATGTAAATGCTGATGCAACTGCTGTTGATGCAAATACAGCTTATACATTTGATATTT ATACAAATGCTTGGGTAGACATTCTTTCTGAAGAAGGTCAAGCGTCAGCAGGTGTATTCGTTCAAGCAATCATGGGAGCA TCATTCTTAACAGAAGCTGAAAGAACTGCTTATGCAGGTAACTCATTTGCAATCGCTGGTTATATTGCTGCTATTAACTT TATTGATGGTTTAAAACGTGTTGAAGCAAATGAACAAGATTTAACTTGGGAAACATTTATTAAAGCTATGGAAGAAGGTC CACTTGATATTCCAATGGGTGGTACTGTAGACTTCTCTGGTGGTAAACGCTGGGGTATCGCTTCTATGTCATTATTAAAA TATAACTCAACTAGCAAGACTTTTGATTTAGTTGAACCAATTGAAACTTTAGAAACAATTCAAAATAAGTAA
Upstream 100 bases:
>100_bases GACCTAGTGAAAGATGAATCGCTAATCAATGCATATTTAGGTTAAGCATTAAATAAGGGTATTTAAAAAGCCGTTGGCTA TAAAAAAAAGGAGAAGTAAG
Downstream 100 bases:
>100_bases AATCTTCTAAAAAGACGATTAAAAAAGAGAAATTCAATATTTTGGATTTCTCTTTCTTTATCGTAAATAAAATATTTAGT TATTAGTTTGACCGATTAGT
Product: ABC transporter ligand-binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 583; Mature: 583
Protein sequence:
>583_residues MKKILGLFLLVLSALVLVACTETKVEIARLSVTPPTKVEYEVGEAFDATGMVVKAIYTDGTDKTLTSSEYELSGFSSATP GLVTVTVTYNEVTEKFGVAIFDKDAPETALAIRVLSTPDQQFYTVSEEFDPTGLEVEVTYSTGRKEILDASEYQLLGFKK GIIGKYDVVVKFGDLETTFFTQVRATNVQGVTDTTIKVGNTAAITGTYSFIGIPFVAGMKAAFEVVNEAGGIDGRLIEYV NRDDGFDANVGITNTGKLINEDKVFALVGHFGTGTVAATIPTIREVGIPMVYAATGVNNLYFEVSPLNPVMPVQPIYLTD GRIMTARALKEAVYGPNKDQKLGANDKVGVLYSAALDGTSIKEGVEVEAKTHGVNGNFIYQVFDPQNTAQLTTTIQSFKT AGVKSIIVAANQAGFKSVIGTMQAEQLNVPTFTSYVNADATAVDANTAYTFDIYTNAWVDILSEEGQASAGVFVQAIMGA SFLTEAERTAYAGNSFAIAGYIAAINFIDGLKRVEANEQDLTWETFIKAMEEGPLDIPMGGTVDFSGGKRWGIASMSLLK YNSTSKTFDLVEPIETLETIQNK
Sequences:
>Translated_583_residues MKKILGLFLLVLSALVLVACTETKVEIARLSVTPPTKVEYEVGEAFDATGMVVKAIYTDGTDKTLTSSEYELSGFSSATP GLVTVTVTYNEVTEKFGVAIFDKDAPETALAIRVLSTPDQQFYTVSEEFDPTGLEVEVTYSTGRKEILDASEYQLLGFKK GIIGKYDVVVKFGDLETTFFTQVRATNVQGVTDTTIKVGNTAAITGTYSFIGIPFVAGMKAAFEVVNEAGGIDGRLIEYV NRDDGFDANVGITNTGKLINEDKVFALVGHFGTGTVAATIPTIREVGIPMVYAATGVNNLYFEVSPLNPVMPVQPIYLTD GRIMTARALKEAVYGPNKDQKLGANDKVGVLYSAALDGTSIKEGVEVEAKTHGVNGNFIYQVFDPQNTAQLTTTIQSFKT AGVKSIIVAANQAGFKSVIGTMQAEQLNVPTFTSYVNADATAVDANTAYTFDIYTNAWVDILSEEGQASAGVFVQAIMGA SFLTEAERTAYAGNSFAIAGYIAAINFIDGLKRVEANEQDLTWETFIKAMEEGPLDIPMGGTVDFSGGKRWGIASMSLLK YNSTSKTFDLVEPIETLETIQNK >Mature_583_residues MKKILGLFLLVLSALVLVACTETKVEIARLSVTPPTKVEYEVGEAFDATGMVVKAIYTDGTDKTLTSSEYELSGFSSATP GLVTVTVTYNEVTEKFGVAIFDKDAPETALAIRVLSTPDQQFYTVSEEFDPTGLEVEVTYSTGRKEILDASEYQLLGFKK GIIGKYDVVVKFGDLETTFFTQVRATNVQGVTDTTIKVGNTAAITGTYSFIGIPFVAGMKAAFEVVNEAGGIDGRLIEYV NRDDGFDANVGITNTGKLINEDKVFALVGHFGTGTVAATIPTIREVGIPMVYAATGVNNLYFEVSPLNPVMPVQPIYLTD GRIMTARALKEAVYGPNKDQKLGANDKVGVLYSAALDGTSIKEGVEVEAKTHGVNGNFIYQVFDPQNTAQLTTTIQSFKT AGVKSIIVAANQAGFKSVIGTMQAEQLNVPTFTSYVNADATAVDANTAYTFDIYTNAWVDILSEEGQASAGVFVQAIMGA SFLTEAERTAYAGNSFAIAGYIAAINFIDGLKRVEANEQDLTWETFIKAMEEGPLDIPMGGTVDFSGGKRWGIASMSLLK YNSTSKTFDLVEPIETLETIQNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62634; Mature: 62634
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKILGLFLLVLSALVLVACTETKVEIARLSVTPPTKVEYEVGEAFDATGMVVKAIYTDG CHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEECCCCCCCCCEEEEEEEECC TDKTLTSSEYELSGFSSATPGLVTVTVTYNEVTEKFGVAIFDKDAPETALAIRVLSTPDQ CCCCCCCCCEEECCCCCCCCCEEEEEEEHHHHHHHHCEEEECCCCCCCEEEEEEECCCCC QFYTVSEEFDPTGLEVEVTYSTGRKEILDASEYQLLGFKKGIIGKYDVVVKFGDLETTFF CEEEECCCCCCCCEEEEEEECCCCHHHCCCCCEEEEEECCCCCCEEEEEEEECCCCEEEE TQVRATNVQGVTDTTIKVGNTAAITGTYSFIGIPFVAGMKAAFEVVNEAGGIDGRLIEYV EEEEECCCCCCCCCEEEECCEEEEEECCCEECCHHHHHHHHHHHHHHHCCCCCCHHHHEE NRDDGFDANVGITNTGKLINEDKVFALVGHFGTGTVAATIPTIREVGIPMVYAATGVNNL CCCCCCCCCCCCCCCCCEECCCCEEEEEECCCCCCEEEECHHHHHCCCCEEEEECCCCEE YFEVSPLNPVMPVQPIYLTDGRIMTARALKEAVYGPNKDQKLGANDKVGVLYSAALDGTS EEEECCCCCCCCCCEEEEECCCEEHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCC IKEGVEVEAKTHGVNGNFIYQVFDPQNTAQLTTTIQSFKTAGVKSIIVAANQAGFKSVIG CCCCCEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHH TMQAEQLNVPTFTSYVNADATAVDANTAYTFDIYTNAWVDILSEEGQASAGVFVQAIMGA CCCHHHCCCCCEEHCCCCCCEEEECCCEEEEEEECCHHHHHHCCCCCCCHHHHHHHHHCH SFLTEAERTAYAGNSFAIAGYIAAINFIDGLKRVEANEQDLTWETFIKAMEEGPLDIPMG HHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCC GTVDFSGGKRWGIASMSLLKYNSTSKTFDLVEPIETLETIQNK CEEECCCCCEECEEEEEEEEECCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MKKILGLFLLVLSALVLVACTETKVEIARLSVTPPTKVEYEVGEAFDATGMVVKAIYTDG CHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEECCCCCCCCCEEEEEEEECC TDKTLTSSEYELSGFSSATPGLVTVTVTYNEVTEKFGVAIFDKDAPETALAIRVLSTPDQ CCCCCCCCCEEECCCCCCCCCEEEEEEEHHHHHHHHCEEEECCCCCCCEEEEEEECCCCC QFYTVSEEFDPTGLEVEVTYSTGRKEILDASEYQLLGFKKGIIGKYDVVVKFGDLETTFF CEEEECCCCCCCCEEEEEEECCCCHHHCCCCCEEEEEECCCCCCEEEEEEEECCCCEEEE TQVRATNVQGVTDTTIKVGNTAAITGTYSFIGIPFVAGMKAAFEVVNEAGGIDGRLIEYV EEEEECCCCCCCCCEEEECCEEEEEECCCEECCHHHHHHHHHHHHHHHCCCCCCHHHHEE NRDDGFDANVGITNTGKLINEDKVFALVGHFGTGTVAATIPTIREVGIPMVYAATGVNNL CCCCCCCCCCCCCCCCCEECCCCEEEEEECCCCCCEEEECHHHHHCCCCEEEEECCCCEE YFEVSPLNPVMPVQPIYLTDGRIMTARALKEAVYGPNKDQKLGANDKVGVLYSAALDGTS EEEECCCCCCCCCCEEEEECCCEEHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCC IKEGVEVEAKTHGVNGNFIYQVFDPQNTAQLTTTIQSFKTAGVKSIIVAANQAGFKSVIG CCCCCEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHH TMQAEQLNVPTFTSYVNADATAVDANTAYTFDIYTNAWVDILSEEGQASAGVFVQAIMGA CCCHHHCCCCCEEHCCCCCCEEEECCCEEEEEEECCHHHHHHCCCCCCCHHHHHHHHHCH SFLTEAERTAYAGNSFAIAGYIAAINFIDGLKRVEANEQDLTWETFIKAMEEGPLDIPMG HHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCC GTVDFSGGKRWGIASMSLLKYNSTSKTFDLVEPIETLETIQNK CEEECCCCCEECEEEEEEEEECCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA