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The map label for this gene is potC [H]

Identifier: 162447336

GI number: 162447336

Start: 497279

End: 498064

Strand: Direct

Name: potC [H]

Synonym: ACL_0473

Alternate gene names: 162447336

Gene position: 497279-498064 (Clockwise)

Preceding gene: 162447335

Following gene: 162447337

Centisome position: 33.22

GC content: 33.59

Gene sequence:

>786_bases
ATGAAGACTAAAGGTAAAATCTTTGCAGATATTTATATCTTTATCGTATTGCTTACAGTTTTAATACCGTTAATCTCAAT
GATTATATTCTCATTTAATCAATCAAATTCACTGATTGTATTTACAGGTTTCACATTTAATTGGTATGTAGATTTATTTA
CATCAAGATCTCTTAGGGAACCTATCTTAAATACATTATTAGTTGCAGGTATATCTACCATGGCAGCAGTCATTTTAGGT
ACTTTAGGCGCGATGGCCTTATCTAAACAAAATCGTCTATTTAGAGAAGTTGCATTATCTGTGAATAATATACCCATCCT
TTCACCAGATATCTTAACTGCGGTTGCATTCTTTGTATTCTTAATCGCTTTTGGGATTGAACGCGGGCTGATGACTATGA
TTCTAGCCCATATATCTTTTTCAACACCTTACGCCCTTTTAGCAATTTATCCAAAAGTGCGTAGCTTAGATCCAAACCTT
TTAGATGCTGCTTATGACTTAGGTGCAACACCAGGTAAAGCATTATGGAAAGTGGTACTACCACAATTAAGAGGTTCTAT
TGTAGCAGGTGCTGCAATCGCATTTACAATGAGTTTTGACGATTATATTATTTCTAAGTTTGCTAGTGGAGAGTTAGTAA
ATAATATTTCAACCTATATGTATTCACAGTCACACGGTATTCGTCCAAACATTAACGCATTATCCACCATCATTATCTTT
ATTATTGGCATCAAAGTCATTCTAGACTATGTCAATTTAAGAAATAAAAAACACGAGGAAGAGTAA

Upstream 100 bases:

>100_bases
TTTGGATATGGTGCAGCGATTGCATTAGTGCTTGCACTCATCTTACTGATATTTATCTTCTTAATTAAGAGGGTAGATAA
ATATGAGGAGGTATTAGCTA

Downstream 100 bases:

>100_bases
AAAAATGAAGAAAATATTTAGTTTAACATTTATTATGGCAGCATTATTTATATTAAATGCTTGTACATCCAATGCATTAG
TAATTTATATGCCAAAAGAA

Product: ABC transporter permease

Products: ADP; phosphate; putrescine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MKTKGKIFADIYIFIVLLTVLIPLISMIIFSFNQSNSLIVFTGFTFNWYVDLFTSRSLREPILNTLLVAGISTMAAVILG
TLGAMALSKQNRLFREVALSVNNIPILSPDILTAVAFFVFLIAFGIERGLMTMILAHISFSTPYALLAIYPKVRSLDPNL
LDAAYDLGATPGKALWKVVLPQLRGSIVAGAAIAFTMSFDDYIISKFASGELVNNISTYMYSQSHGIRPNINALSTIIIF
IIGIKVILDYVNLRNKKHEEE

Sequences:

>Translated_261_residues
MKTKGKIFADIYIFIVLLTVLIPLISMIIFSFNQSNSLIVFTGFTFNWYVDLFTSRSLREPILNTLLVAGISTMAAVILG
TLGAMALSKQNRLFREVALSVNNIPILSPDILTAVAFFVFLIAFGIERGLMTMILAHISFSTPYALLAIYPKVRSLDPNL
LDAAYDLGATPGKALWKVVLPQLRGSIVAGAAIAFTMSFDDYIISKFASGELVNNISTYMYSQSHGIRPNINALSTIIIF
IIGIKVILDYVNLRNKKHEEE
>Mature_261_residues
MKTKGKIFADIYIFIVLLTVLIPLISMIIFSFNQSNSLIVFTGFTFNWYVDLFTSRSLREPILNTLLVAGISTMAAVILG
TLGAMALSKQNRLFREVALSVNNIPILSPDILTAVAFFVFLIAFGIERGLMTMILAHISFSTPYALLAIYPKVRSLDPNL
LDAAYDLGATPGKALWKVVLPQLRGSIVAGAAIAFTMSFDDYIISKFASGELVNNISTYMYSQSHGIRPNINALSTIIIF
IIGIKVILDYVNLRNKKHEEE

Specific function: Required for the activity of the bacterial transport system of putrescine and spermidine [H]

COG id: COG1177

COG function: function code E; ABC-type spermidine/putrescine transport system, permease component II

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787081, Length=246, Percent_Identity=31.7073170731707, Blast_Score=123, Evalue=1e-29,
Organism=Escherichia coli, GI1787368, Length=227, Percent_Identity=31.2775330396476, Blast_Score=123, Evalue=2e-29,
Organism=Escherichia coli, GI1787714, Length=191, Percent_Identity=27.2251308900524, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 28852; Mature: 28852

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTKGKIFADIYIFIVLLTVLIPLISMIIFSFNQSNSLIVFTGFTFNWYVDLFTSRSLRE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCHHHHH
PILNTLLVAGISTMAAVILGTLGAMALSKQNRLFREVALSVNNIPILSPDILTAVAFFVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
LIAFGIERGLMTMILAHISFSTPYALLAIYPKVRSLDPNLLDAAYDLGATPGKALWKVVL
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHH
PQLRGSIVAGAAIAFTMSFDDYIISKFASGELVNNISTYMYSQSHGIRPNINALSTIIIF
HHHCCCHHCCHHHEEEECHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
IIGIKVILDYVNLRNKKHEEE
HHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKTKGKIFADIYIFIVLLTVLIPLISMIIFSFNQSNSLIVFTGFTFNWYVDLFTSRSLRE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCHHHHH
PILNTLLVAGISTMAAVILGTLGAMALSKQNRLFREVALSVNNIPILSPDILTAVAFFVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
LIAFGIERGLMTMILAHISFSTPYALLAIYPKVRSLDPNLLDAAYDLGATPGKALWKVVL
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHH
PQLRGSIVAGAAIAFTMSFDDYIISKFASGELVNNISTYMYSQSHGIRPNINALSTIIIF
HHHCCCHHCCHHHEEEECHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
IIGIKVILDYVNLRNKKHEEE
HHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; putrescine [Periplasm]; H2O [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7569993 [H]