| Definition | Acholeplasma laidlawii PG-8A chromosome, complete genome. |
|---|---|
| Accession | NC_010163 |
| Length | 1,496,992 |
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The map label for this gene is potA [H]
Identifier: 162447334
GI number: 162447334
Start: 495188
End: 496420
Strand: Direct
Name: potA [H]
Synonym: ACL_0471
Alternate gene names: 162447334
Gene position: 495188-496420 (Clockwise)
Preceding gene: 162447333
Following gene: 162447335
Centisome position: 33.08
GC content: 31.63
Gene sequence:
>1233_bases ATGGCTTTTATTGAATTAAAAGATGTAACTAAAGAGTTTAATAATCAAGTAGTATTAAGGGGTATTGACCTAGAAATCAA AAGTAATGAGTTTGTCACCTTACTTGGACCATCTGGATGTGGGAAAACTACGACATTAAGAATTATTGGTGGTTTTATTG AACCAACAGGTGGTGAAGTCTTATTTGATGGTGTAGATATTTTAAAATTACCGGCTTATAAAAGACCAACAAATACAGTA TTCCAAAGATATTCTTTATTTCCTCATTTAAATGTTTTTGAAAACGTGGCATTTGGTTTACGTGTTAAAGACCAAAACCG TGAAGCAAAAAAAGAAATTACTACTTTAAAAGAAATCTATAAAAAACAAATTGATGAACTACAATACAAGGTAGATCATG ACAGAACAAGTAGTCTTGAATTAAAAAACCAAGTTAAACTAGAAAAGAAAGCACTAAAAGAAAAACTTGATCAAGATATT AAAGACCTACAAGCTACCTTTATTTCTAAAAAGAAATATGAATTTATCATTGAAGAAAAAGTGTCTAAATATTTAAAAAT GGTAGGTCTTGATGGTTATGAAAACCGTTCTATTTCCAAATTAAGTGGTGGTCAGATGCAACGTGTTGCAATCGCACGAG CACTAATTAATGAACCTAAGGTGTTACTGTTAGATGAGCCACTTGCTGCACTTGATTTAAAACTACGTCAAGAAATGCAA TATGAATTAAAAGAAATTCAAAGAAGTGCTGGTATTACATTTATTTTCGTAACGCACGATCAAGAAGAAGCTTTAACGAT GAGTGATAAGATTGTAGTTATGAATAAGGGTGAAATTCAACAAGTAGGTACACCAGTTGATATTTATAATGAACCGATAA ACCGATTTGTTGCAAACTTTATTGGTGAATCTAATATCGTATCAGGCATAATGAAACAAGATTATCTAGTACATTTTGAT GGTTTTGATTTTGAATGTGTCGACAAAGGATTTGACACCAATCAAGAAGTAGACATTGTTCTACGTCCTGAAGATTTAGA TATTGTAGAGTTAGGTACCGGAAAAATTAGTGGTATAGTTGATAGTGTTGTTTTTAAAGGTGTACACTTCGAAATTGATG TGAAAACAGAACATAGAATTTATACAGTACATACAACAGATTTTAAAGCAGAAGGGATGAAAGTTGATCTAGACTGGTTC CCAGAAGATATCCATGTTATGGAGGTCTGGTAA
Upstream 100 bases:
>100_bases ATTGTAATTTAACTATATGTTTATATATAGTAAACAAATAGAGATAATATGAAGACGATATTTTACAATGAGTAAACATA TGTGAAGGAAGGTACAAATC
Downstream 100 bases:
>100_bases TGATTAATTTTCCTAAGAAGCAACAAAAACATCTGCATAAAACACAAAAATTGAATTTTGAATTCTATTTAGGTGCCCCA TATTATCTTATGATGATTTT
Product: ABC transporter ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 410; Mature: 409
Protein sequence:
>410_residues MAFIELKDVTKEFNNQVVLRGIDLEIKSNEFVTLLGPSGCGKTTTLRIIGGFIEPTGGEVLFDGVDILKLPAYKRPTNTV FQRYSLFPHLNVFENVAFGLRVKDQNREAKKEITTLKEIYKKQIDELQYKVDHDRTSSLELKNQVKLEKKALKEKLDQDI KDLQATFISKKKYEFIIEEKVSKYLKMVGLDGYENRSISKLSGGQMQRVAIARALINEPKVLLLDEPLAALDLKLRQEMQ YELKEIQRSAGITFIFVTHDQEEALTMSDKIVVMNKGEIQQVGTPVDIYNEPINRFVANFIGESNIVSGIMKQDYLVHFD GFDFECVDKGFDTNQEVDIVLRPEDLDIVELGTGKISGIVDSVVFKGVHFEIDVKTEHRIYTVHTTDFKAEGMKVDLDWF PEDIHVMEVW
Sequences:
>Translated_410_residues MAFIELKDVTKEFNNQVVLRGIDLEIKSNEFVTLLGPSGCGKTTTLRIIGGFIEPTGGEVLFDGVDILKLPAYKRPTNTV FQRYSLFPHLNVFENVAFGLRVKDQNREAKKEITTLKEIYKKQIDELQYKVDHDRTSSLELKNQVKLEKKALKEKLDQDI KDLQATFISKKKYEFIIEEKVSKYLKMVGLDGYENRSISKLSGGQMQRVAIARALINEPKVLLLDEPLAALDLKLRQEMQ YELKEIQRSAGITFIFVTHDQEEALTMSDKIVVMNKGEIQQVGTPVDIYNEPINRFVANFIGESNIVSGIMKQDYLVHFD GFDFECVDKGFDTNQEVDIVLRPEDLDIVELGTGKISGIVDSVVFKGVHFEIDVKTEHRIYTVHTTDFKAEGMKVDLDWF PEDIHVMEVW >Mature_409_residues AFIELKDVTKEFNNQVVLRGIDLEIKSNEFVTLLGPSGCGKTTTLRIIGGFIEPTGGEVLFDGVDILKLPAYKRPTNTVF QRYSLFPHLNVFENVAFGLRVKDQNREAKKEITTLKEIYKKQIDELQYKVDHDRTSSLELKNQVKLEKKALKEKLDQDIK DLQATFISKKKYEFIIEEKVSKYLKMVGLDGYENRSISKLSGGQMQRVAIARALINEPKVLLLDEPLAALDLKLRQEMQY ELKEIQRSAGITFIFVTHDQEEALTMSDKIVVMNKGEIQQVGTPVDIYNEPINRFVANFIGESNIVSGIMKQDYLVHFDG FDFECVDKGFDTNQEVDIVLRPEDLDIVELGTGKISGIVDSVVFKGVHFEIDVKTEHRIYTVHTTDFKAEGMKVDLDWFP EDIHVMEVW
Specific function: Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system [H]
COG id: COG3842
COG function: function code E; ABC-type spermidine/putrescine transport systems, ATPase components
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI148612844, Length=268, Percent_Identity=30.5970149253731, Blast_Score=102, Evalue=6e-22, Organism=Homo sapiens, GI255708477, Length=268, Percent_Identity=30.2238805970149, Blast_Score=102, Evalue=9e-22, Organism=Escherichia coli, GI1787370, Length=388, Percent_Identity=40.4639175257732, Blast_Score=252, Evalue=3e-68, Organism=Escherichia coli, GI1787712, Length=372, Percent_Identity=37.6344086021505, Blast_Score=241, Evalue=9e-65, Organism=Escherichia coli, GI87081709, Length=200, Percent_Identity=39.5, Blast_Score=159, Evalue=3e-40, Organism=Escherichia coli, GI87081791, Length=184, Percent_Identity=41.8478260869565, Blast_Score=145, Evalue=3e-36, Organism=Escherichia coli, GI1790467, Length=306, Percent_Identity=31.3725490196078, Blast_Score=142, Evalue=3e-35, Organism=Escherichia coli, GI1788761, Length=175, Percent_Identity=41.7142857142857, Blast_Score=139, Evalue=4e-34, Organism=Escherichia coli, GI87082267, Length=198, Percent_Identity=36.8686868686869, Blast_Score=138, Evalue=7e-34, Organism=Escherichia coli, GI1789672, Length=306, Percent_Identity=27.4509803921569, Blast_Score=122, Evalue=5e-29, Organism=Escherichia coli, GI1788450, Length=131, Percent_Identity=41.2213740458015, Blast_Score=111, Evalue=1e-25, Organism=Escherichia coli, GI1789032, Length=122, Percent_Identity=45.0819672131148, Blast_Score=110, Evalue=2e-25, Organism=Escherichia coli, GI1789864, Length=304, Percent_Identity=25, Blast_Score=108, Evalue=8e-25, Organism=Escherichia coli, GI1787500, Length=287, Percent_Identity=26.1324041811847, Blast_Score=101, Evalue=1e-22, Organism=Escherichia coli, GI1789891, Length=266, Percent_Identity=30.0751879699248, Blast_Score=99, Evalue=4e-22, Organism=Escherichia coli, GI1790162, Length=311, Percent_Identity=26.3665594855305, Blast_Score=99, Evalue=4e-22, Organism=Escherichia coli, GI1786563, Length=131, Percent_Identity=43.5114503816794, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1787164, Length=91, Percent_Identity=49.4505494505495, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI1786398, Length=125, Percent_Identity=36.8, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI1787029, Length=117, Percent_Identity=40.1709401709402, Blast_Score=86, Evalue=4e-18, Organism=Escherichia coli, GI1788506, Length=313, Percent_Identity=22.3642172523962, Blast_Score=85, Evalue=7e-18, Organism=Escherichia coli, GI1786319, Length=165, Percent_Identity=33.9393939393939, Blast_Score=83, Evalue=3e-17, Organism=Escherichia coli, GI1787547, Length=132, Percent_Identity=33.3333333333333, Blast_Score=82, Evalue=8e-17, Organism=Escherichia coli, GI1786253, Length=98, Percent_Identity=38.7755102040816, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI1788644, Length=126, Percent_Identity=38.8888888888889, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI1789586, Length=111, Percent_Identity=38.7387387387387, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI1787089, Length=124, Percent_Identity=37.9032258064516, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI87081834, Length=112, Percent_Identity=39.2857142857143, Blast_Score=79, Evalue=5e-16, Organism=Escherichia coli, GI1786872, Length=125, Percent_Identity=34.4, Blast_Score=79, Evalue=8e-16, Organism=Escherichia coli, GI1787758, Length=104, Percent_Identity=35.5769230769231, Blast_Score=78, Evalue=9e-16, Organism=Escherichia coli, GI1788225, Length=109, Percent_Identity=40.3669724770642, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI1790544, Length=114, Percent_Identity=35.9649122807018, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1789962, Length=127, Percent_Identity=31.496062992126, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1789593, Length=307, Percent_Identity=25.0814332247557, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1790739, Length=294, Percent_Identity=23.469387755102, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI48994883, Length=302, Percent_Identity=23.5099337748344, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI1787182, Length=279, Percent_Identity=26.1648745519713, Blast_Score=76, Evalue=4e-15, Organism=Escherichia coli, GI145693107, Length=124, Percent_Identity=33.0645161290323, Blast_Score=76, Evalue=5e-15, Organism=Escherichia coli, GI1790190, Length=85, Percent_Identity=42.3529411764706, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI1786803, Length=111, Percent_Identity=34.2342342342342, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI87081782, Length=132, Percent_Identity=33.3333333333333, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1786345, Length=111, Percent_Identity=35.1351351351351, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1789963, Length=309, Percent_Identity=23.6245954692557, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1787759, Length=102, Percent_Identity=31.3725490196078, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1786698, Length=113, Percent_Identity=31.858407079646, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1788165, Length=121, Percent_Identity=32.2314049586777, Blast_Score=65, Evalue=9e-12, Organism=Escherichia coli, GI1787105, Length=100, Percent_Identity=39, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI1788053, Length=87, Percent_Identity=41.3793103448276, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI1789873, Length=105, Percent_Identity=39.0476190476191, Blast_Score=64, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71992290, Length=288, Percent_Identity=29.1666666666667, Blast_Score=92, Evalue=5e-19, Organism=Caenorhabditis elegans, GI17511077, Length=268, Percent_Identity=29.4776119402985, Blast_Score=91, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17567269, Length=278, Percent_Identity=28.7769784172662, Blast_Score=86, Evalue=5e-17, Organism=Caenorhabditis elegans, GI193211017, Length=269, Percent_Identity=28.6245353159851, Blast_Score=82, Evalue=5e-16, Organism=Caenorhabditis elegans, GI71996809, Length=269, Percent_Identity=28.6245353159851, Blast_Score=82, Evalue=5e-16, Organism=Caenorhabditis elegans, GI193211015, Length=269, Percent_Identity=28.6245353159851, Blast_Score=82, Evalue=6e-16, Organism=Caenorhabditis elegans, GI115534520, Length=269, Percent_Identity=27.8810408921933, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI115535101, Length=272, Percent_Identity=27.9411764705882, Blast_Score=78, Evalue=1e-14, Organism=Caenorhabditis elegans, GI25146777, Length=269, Percent_Identity=27.5092936802974, Blast_Score=78, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17567265, Length=270, Percent_Identity=25.1851851851852, Blast_Score=73, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17558664, Length=85, Percent_Identity=44.7058823529412, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI193202349, Length=97, Percent_Identity=45.360824742268, Blast_Score=70, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17510237, Length=128, Percent_Identity=25.78125, Blast_Score=68, Evalue=8e-12, Organism=Caenorhabditis elegans, GI212646699, Length=87, Percent_Identity=44.8275862068966, Blast_Score=67, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6324985, Length=94, Percent_Identity=34.0425531914894, Blast_Score=66, Evalue=1e-11, Organism=Drosophila melanogaster, GI24643674, Length=108, Percent_Identity=37.037037037037, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI85726357, Length=86, Percent_Identity=48.8372093023256, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI17136662, Length=128, Percent_Identity=39.84375, Blast_Score=73, Evalue=3e-13, Organism=Drosophila melanogaster, GI24653245, Length=111, Percent_Identity=37.8378378378378, Blast_Score=66, Evalue=4e-11, Organism=Drosophila melanogaster, GI281363262, Length=111, Percent_Identity=37.8378378378378, Blast_Score=66, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 - InterPro: IPR008995 - InterPro: IPR017879 - InterPro: IPR013611 [H]
Pfam domain/function: PF00005 ABC_tran; PF08402 TOBE_2 [H]
EC number: =3.6.3.31 [H]
Molecular weight: Translated: 46925; Mature: 46793
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFIELKDVTKEFNNQVVLRGIDLEIKSNEFVTLLGPSGCGKTTTLRIIGGFIEPTGGEV CCEEEHHHHHHHHCCEEEEEEEEEEECCCCEEEEECCCCCCCCEEEEEEECEECCCCCEE LFDGVDILKLPAYKRPTNTVFQRYSLFPHLNVFENVAFGLRVKDQNREAKKEITTLKEIY EECCCCEEECCCCCCCHHHHHHHHHCCCCCCHHHCCEEEEEEECCCCHHHHHHHHHHHHH KKQIDELQYKVDHDRTSSLELKNQVKLEKKALKEKLDQDIKDLQATFISKKKYEFIIEEK HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH VSKYLKMVGLDGYENRSISKLSGGQMQRVAIARALINEPKVLLLDEPLAALDLKLRQEMQ HHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHH YELKEIQRSAGITFIFVTHDQEEALTMSDKIVVMNKGEIQQVGTPVDIYNEPINRFVANF HHHHHHHHHCCEEEEEEECCCCHHEEECCEEEEEECCCHHHCCCCHHHHHHHHHHHHHHH IGESNIVSGIMKQDYLVHFDGFDFECVDKGFDTNQEVDIVLRPEDLDIVELGTGKISGIV CCCHHHHHHHHCCCEEEEECCCCEEEECCCCCCCCCEEEEECCCCCCEEEECCCCHHHHH DSVVFKGVHFEIDVKTEHRIYTVHTTDFKAEGMKVDLDWFPEDIHVMEVW HHHHHCCEEEEEEEECCCEEEEEEECCEECCCEEEEEECCCCCEEEEEEC >Mature Secondary Structure AFIELKDVTKEFNNQVVLRGIDLEIKSNEFVTLLGPSGCGKTTTLRIIGGFIEPTGGEV CEEEHHHHHHHHCCEEEEEEEEEEECCCCEEEEECCCCCCCCEEEEEEECEECCCCCEE LFDGVDILKLPAYKRPTNTVFQRYSLFPHLNVFENVAFGLRVKDQNREAKKEITTLKEIY EECCCCEEECCCCCCCHHHHHHHHHCCCCCCHHHCCEEEEEEECCCCHHHHHHHHHHHHH KKQIDELQYKVDHDRTSSLELKNQVKLEKKALKEKLDQDIKDLQATFISKKKYEFIIEEK HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH VSKYLKMVGLDGYENRSISKLSGGQMQRVAIARALINEPKVLLLDEPLAALDLKLRQEMQ HHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHH YELKEIQRSAGITFIFVTHDQEEALTMSDKIVVMNKGEIQQVGTPVDIYNEPINRFVANF HHHHHHHHHCCEEEEEEECCCCHHEEECCEEEEEECCCHHHCCCCHHHHHHHHHHHHHHH IGESNIVSGIMKQDYLVHFDGFDFECVDKGFDTNQEVDIVLRPEDLDIVELGTGKISGIV CCCHHHHHHHHCCCEEEEECCCCEEEECCCCCCCCCEEEEECCCCCCEEEECCCCHHHHH DSVVFKGVHFEIDVKTEHRIYTVHTTDFKAEGMKVDLDWFPEDIHVMEVW HHHHHCCEEEEEEEECCCEEEEEEECCEECCCEEEEEECCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA